Histoplasma mississippiense: HCAG_01822
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Entry
HCAG_01822 CDS
T02229
Name
(RefSeq) hypothetical protein
KO
K18748
protein SSD1
Organism
aje
Histoplasma mississippiense
Brite
KEGG Orthology (KO) [BR:
aje00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aje03019
]
HCAG_01822
Messenger RNA biogenesis [BR:
aje03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
HCAG_01822
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNB
Dis3l2_C_term
OB_Dis3
CSD2
Rrp44_CSD1
OB_HELZ2
DUF5774
Motif
Other DBs
NCBI-GeneID:
5450199
NCBI-ProteinID:
XP_001544775
UniProt:
A6QWR5
LinkDB
All DBs
AA seq
1344 aa
AA seq
DB search
MDQQGQSIPGPAGRRLHIAHRRSPSELTPLMMEQLALQQQIELLQQQQQQIAATHQQYVN
MGLLQPQQPLQHVAAYSPTMQAQAIPSVTHNNFQFPQSQQQQPQHVSVPLNPQGQPSHRR
NQSALPNVGMGPPPAPSSGASGSSYDYNQGQGQGQSHGSSNHNRENGQQSRGRGAAPPGG
GHQRRHSLALPEARKAAELAQQKRTTSGFQFSIPGASGASSTSNQGEGSPTEKPPPPASS
SPQPPQGLGVQRAGNIRSGSHTRSQSLAVGSGRSGGMSSGRGAGGFQFPQSSEGSPAPDS
SSRRQSQPSHGRSGSRNFESNWRQQSNNQGQGQDQQRTAMGSFGQQQGGANFQPGHRTRG
SVNQSVGSLGSFQIYRSTPTHPASPRSSCDGTSANVCRGQLNIQNLGLQAAPQHVATQLS
AQQQQQQQQQQQQQQRKTLFTPYLPQASLPALLNDGQLVAGILRVNKKNRSDAYVTTPDL
DADIFICGSKDRNRALEGDLVAVELLDVDEKKRKDITDTRSGSTAGMDKNARPDSITNGD
PGQIAPDGSIRRRGSLRQRPTQKKNDDVEVEGQSLLLVEEDEISDEQKPLYAGHVVAVIE
RVAGQMFAGSLGLLRPSSQATKEKQEAERQARDGGHSRHHHDRQQDKPKIVWFKPTDKRV
PLIAIPTEQAPRDFVEKHAEYANNIFVACIKRWPITSLHPFGTLVEQLGAMGNLKVETDA
LLRDNNFASDEFSDAVLKNVGFEKWSVKDEGEALLENRRDFRDETTFTIDPNGYKELDDA
IHVKSLPDGKVEVGIHVADVAHFIKSNSLVDREAKKRVNSATGSVEGEPWIGKGVIKSSG
KLTYDEVDAILNGNSDVELHGATANDIKTLSDIASKFKKARFGNRSSNIPSLRLLYQLDD
ENVPVEQNIFNSTPAHELIEELSHKANSFVAKKLLSAIPDKAFLRRQAPPNVRRLQTFVD
RMTRLGYDIDPTSSGTLQTSLFKIEDVDIRKGMETLLLKAMQRAKYYVAGNMTEDQRQHY
VLNLPVYTHFTNPSRRYADIIVHRQLEAVLSNSECTDDVENLTKTAEQCNNKKDSAQTAQ
EQSVHIESCRIMDKKRSEIGGDLISEGIVLCVYESAFDVLIPEYGFEKRVHCDQLPLKKA
EFRKEERVLELYWEKGVPSSAYIPEDERPKAAQKTRAANAAAAAREAEAARERAREREEA
QRKQTDTGTISTDDVDALFDDDEDDEDEDDDISEATEMAAGVSLNSPVDRSTQSMPPSPT
RNGHLQQTPHRTRSDPKIASSTVETPEAKLTNKEKYLKLFRLREEDGEYIQDVTEMTRVP
IILKTDLSKSPPCLTIRSVNPYAL
NT seq
4035 nt
NT seq
+upstream
nt +downstream
nt
atggatcaacaaggccaatcaatccccggccctgccggtaggcgcttgcatattgcccat
cggagaagcccctcggagcttactccgcttatgatggaacaattggctttacaacaacag
atcgaactgctccaacagcagcaacagcaaatcgctgccacgcatcagcaatacgtcaac
atggggcttttgcaaccgcaacagcctctccaacatgtggctgcctactcacccaccatg
caagctcaagctatccctagcgttactcataataattttcagtttccccaatctcaacaa
cagcagccgcagcatgtgagcgtacccctgaacccccaaggtcagccctcccaccgacgt
aaccagtctgcactgccaaatgttggcatgggccctccgcctgcgccttcttcaggtgca
tccggttcttcctatgattataaccagggtcagggtcagggtcagagccacggttcttct
aatcataatcgtgagaatggtcagcaatcccgtggtcgcggggccgctcctccaggaggt
ggtcatcagcgtcgccattcactagctcttcctgaagcgagaaaagctgccgaacttgcg
cagcaaaaaagaacgacttctggattccagttctcgattccaggtgcctcaggtgcttcg
agcacatcgaatcaaggtgaaggttctcccactgaaaagcctcccccgcctgcctcttct
tccccccagcctccccagggactaggcgttcaacgagctggaaatattagatctggatcc
catacacggagtcagtccttggctgtaggcagcggtcgcagtggtggaatgtcgagcggc
agaggtgctggcgggttccagtttccgcaatcaagcgagggatcaccagcgccggattct
tcttctcgacgccaaagtcaaccatctcatggtcgatcaggctcaagaaacttcgaaagc
aactggaggcagcagagtaacaaccagggtcaagggcaggaccagcaacgaactgctatg
gggagctttggccaacaacaaggtggagcaaatttccaaccaggccatcgcacacgtgga
tcagtgaaccaatcggtcggatcccttggttccttccaaatatacaggtcaaccccaact
catccagcttccccaaggtcaagttgtgatggcacctccgcaaatgtttgccgcggtcag
ctgaacatccaaaatctaggtctgcaagccgctcctcagcatgttgccacgcagctgtct
gcgcagcaacaacaacagcagcagcagcagcaacagcagcaacagcgtaaaacgcttttt
accccttaccttccccaggcatcattgcctgctctactgaacgacggtcaactggttgcc
ggtattttgagggtcaacaagaaaaatagatccgacgcttacgtcactacgcctgatctc
gatgctgatattttcatctgcggaagcaaggatagaaaccgtgctctcgaaggtgatctt
gttgctgttgaactactggacgttgatgaaaaaaaacgcaaggatatcaccgacaccaga
agtggtagcactgctgggatggacaagaacgctcgaccggactctattacaaatggcgat
cctggacaaatcgctcccgacggaagcattcgacgaagaggcagtctccgccaacgcccc
acccagaagaaaaatgatgacgtggaagttgaaggccagagccttcttctcgtcgaggaa
gatgaaatcagcgatgaacagaaaccactctacgctggccacgttgttgctgtgatcgaa
cgtgtagccggtcagatgtttgctggttcacttggccttcttcgaccctccagccaggcg
accaaggagaaacaggaagcagagcgacaggctagggacggcggtcattctcgccaccac
catgaccgtcaacaggataagccaaagattgtttggttcaagcctactgacaaacgtgtt
cccttgattgcaatccccaccgaacaagctccccgagactttgttgagaagcacgctgaa
tacgctaataacatatttgttgcgtgcattaagcgatggcccatcacgtcacttcatcca
tttggaacacttgttgaacaacttggcgctatgggcaacttgaaggttgagacggacgcc
ctgctcagagacaataactttgcctctgatgaattctctgatgctgtcttgaagaatgtc
ggcttcgaaaaatggtccgtaaaggacgaaggcgaagccttgttggagaaccgacgggac
ttccgtgatgagactactttcactatcgatcccaacggctacaaggaattggatgacgct
atccatgtcaaatcgcttcctgatgggaaagtcgaagttggcatccatgtggcagacgtc
gctcattttatcaagagtaactcgcttgttgatagagaggctaagaagcgtgtgaattcc
gccaccggctctgtggaaggagaaccgtggattggaaaaggtgtaatcaaaagttcggga
aaactcacctacgatgaagtggatgccatcctgaacggaaattccgacgttgaacttcac
ggggctaccgcaaatgatatcaaaaccttgagtgatattgccagtaagtttaagaaggca
agatttggcaatcggtcctccaatataccatctctgcgactcctctaccagctcgatgat
gagaacgtccctgtcgaacagaacattttcaactccacgccggcgcacgaactcattgag
gaattaagccacaaagcaaattcctttgtcgcaaagaaacttttatctgctattccagat
aaagcattccttcgccgccaggcaccaccaaatgtccgtcggctacagactttcgttgat
cggatgacgagactaggatacgatatcgatcctactagtagtggcacactgcagactagc
ctgttcaaaatagaagatgttgatattcgcaaggggatggaaaccttgcttctgaaagct
atgcagcgtgcgaagtattatgttgcaggaaatatgacggaggatcagcgacagcactat
gttcttaatttacctgtatacactcacttcaccaacccctcaagacgctatgcagatatt
atcgtccatcgacaactggaagcagtactttccaattccgaatgtaccgatgacgtcgaa
aacctcactaaaaccgctgaacaatgcaacaacaagaaggattctgcccagactgctcag
gagcagagtgtccacattgagtcatgtcgcattatggacaagaaacgaagcgagatcgga
ggtgaccttatcagcgagggcattgtcctctgcgtttacgaatctgctttcgatgtcctt
atcccagaatatggcttcgagaaacgtgtccattgtgatcagttgccgttaaagaaagca
gagttccgtaaagaggagcgtgttctcgagttatattgggagaaaggcgtcccgtcatct
gcttatattccagaggatgaacgccccaaggccgcgcaaaaaacacgtgctgccaacgct
gccgctgccgctcgtgaagcggaagccgcaagggagcgagctcgcgagcgagaagaagct
caacggaaacaaacagacaccggcactatttcaacagacgacgttgacgctctttttgat
gacgacgaggacgacgaagatgaggacgacgatatctctgaggctacagagatggctgca
ggcgtctcccttaactctccggtagatcgatcgactcaaagcatgccgccatctcctacg
aggaatggccacttgcagcaaacccctcatcgcactcgttctgacccaaagatcgcaagc
agtactgttgaaactcctgaagctaaattgacgaataaagaaaagtatctcaagcttttc
agactgcgggaggaggacggtgaatatattcaggacgtcactgagatgactcgtgtgcca
attatattgaaaacagatctgtccaagagcccaccatgtctcactattcgctccgtcaac
ccatacgctctttag
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integrated database retrieval system