Histoplasma mississippiense: HCAG_02152
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Entry
HCAG_02152 CDS
T02229
Name
(RefSeq) similar to cleavage and polyadenylation specifity factor, 73 kDa subunit
KO
K14403
cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-]
Organism
aje
Histoplasma mississippiense
Pathway
aje03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
aje00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
HCAG_02152
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aje03021
]
HCAG_02152
03019 Messenger RNA biogenesis [BR:
aje03019
]
HCAG_02152
Transcription machinery [BR:
aje03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
HCAG_02152
Messenger RNA biogenesis [BR:
aje03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
HCAG_02152
U7-dependent histone pre-mRNA processing factors
HCAG_02152
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CPSF73-100_C
Beta-Casp
Lactamase_B
Lactamase_B_6
Anti-Pycsar_Apyc1
RMMBL
Lactamase_B_2
Lactamase_B_3
P_C
Beta_lactamase3
Motif
Other DBs
NCBI-GeneID:
5449161
NCBI-ProteinID:
XP_001541981
LinkDB
All DBs
AA seq
925 aa
AA seq
DB search
MAAKRKASSLHAVDGDEPVDPSDELLFYNLGGGNEVGRSCHIIQYKGKTVMLDAGMHPAK
DGFAALPFFDDFDLSTVDILLISHFHLDHSASLPYVLSKTNFRGRVFMTHATKAIYKWLI
QDNVRVSNTSSSSDQRTTLYTEQDHLSTLSHIEAIDFNTTHTINNIRITPFPAGHVLGAA
MFLISIAGLNILFTGDYSREEDRHLISAEAPKGVKVDVLITESTFGVSSNPPRLEREAAL
IKSITSILNRGGRVLMPVFALGRAQELLLILDEYWSRHPELQKIPIYYIGNIARRCMVVY
QTYIGAMNENIKRLFRQRMAEAEASGDKSISAGPWDFRFVRSVRSIERFDDVGGCVMLAS
PGMLQTGTSRELLERWAPNERNGVIMTGYSVEGTMGKQILNEPEQIPAVMSGRNAVGPAR
RMATGDDDEQKVMIPRRCSVDEISFAAHVDGMENRAFIEEVGAPVVILVHGEKNQMMRLK
SKLLSLNTDKTVKIKVYTPANCEEVRIPFQVDKVAKVVGRLAETVPPSGHKESRLLNGVL
VQHGFKLSLMAPEDLREYAGLATTTVTCKQHITLNTASIELIRWALEGTFGAVEEIRPDR
PKAEDLKTNGFDGESTDVKKEDEKVDEEISTEETLAYLVMGCVTILYTPRTREVIVEWEG
NMMNDGIADAVMAVLLTVETSPASVKRSSKQHRHLHSHTPTLNLPNPHSNLTPEERLARL
CMLLEAQFGPNIAAIEKPRIKQTSFAAATTTTTTSSSTLNNNGTSTPRTTATVASTLLKP
DPDATSAVSTSTASGTTITAPSPSLSPSPTPTPSPEDLTAEDLYELESAELERLYSLGIP
VPGLEIRVDKHVARVWLETLEVECGSAVLRDRVRVVVERAVETVAGLWRGPIQGGRGSRV
GVWKAKLEGEGEKMAVREGKGYGVD
NT seq
2778 nt
NT seq
+upstream
nt +downstream
nt
atggcagcaaaacggaaggcgtcctctcttcacgccgttgacggtgatgagcctgttgac
ccatctgacgagctcctgttctacaatcttggtggtggaaatgaagtcgggaggtcatgt
catatcattcaatacaaggggaagacagttatgcttgacgctggaatgcacccggcaaaa
gatggattcgctgcactcccattcttcgacgattttgacctaagcactgtcgatatcctt
cttataagccatttccatctggaccactcagccagtctaccctacgtccttagcaaaacc
aacttcagaggccgggtttttatgacccatgctaccaaagctatctacaaatggttgatc
caggacaatgtccgggttagcaatacgtcatcttcctccgatcagcgcacaactctctac
acggaacaagaccacctctcgaccttgtcccatatagaagccattgatttcaacaccacc
catactatcaacaacattcgtattaccccatttcctgcgggccatgtccttggtgcagcc
atgtttcttatctcaatcgctggtcttaacattctattcacgggcgactactctcgtgaa
gaagaccgacatcttatatcagcagaagcaccaaaaggtgtcaaagttgacgtgctcatc
actgaatccacattcggtgtatcttccaacccacctcgcttggaacgagaggcggcgctt
attaaatctatcacatcaattcttaaccgaggaggacgggttctcatgccagtttttgct
ctaggacgagcacaggagctattattaattctcgacgaatactggagtcggcatcccgag
ttgcagaagatacctatctactatatcggaaacattgcacggagatgtatggttgtttat
cagacatacattggagccatgaacgaaaatatcaagcgccttttccgccaacggatggcg
gaggctgaagcctctggggataagagcatcagcgcaggaccgtgggatttccggttcgtg
cgcagtgtgaggagtattgagcgctttgatgatgtgggcggatgcgtcatgcttgcctct
cctggtatgctgcaaacaggcactagccgggaacttctggaacggtgggcgccaaacgaa
cgaaacggtgtaattatgactggctatagtgttgagggtactatgggcaaacagatccta
aatgagccagagcaaattccggcagtgatgagcggcaggaatgctgttgggccggctagg
agaatggccactggagatgacgatgagcaaaaggtcatgattccgaggcgatgcagcgtg
gatgaaataagttttgcagcccacgtcgatggaatggaaaaccgcgcgtttattgaagaa
gttggcgcccctgttgtgatccttgtccacggagaaaaaaaccaaatgatgcgccttaaa
tccaaactgctaagtttaaacacggacaaaaccgtcaaaatcaaagtatatacgccagca
aactgcgaggaagtccgaatacccttccaagtcgacaaggttgccaaagtcgtcgggcgg
cttgcagagaccgtaccaccttctggccataaggagtcacgacttctgaacggcgttctc
gtgcaacacggattcaagttatccctgatggcgcctgaagatctcagggaatatgctggc
ctggctaccacgaccgtcacttgcaaacagcacatcacgctcaacacggccagcattgaa
ttgatccgatgggcgttggaggggacctttggcgctgttgaggaaatccgtccggatcgc
ccaaaggccgaagacctgaagaccaacggttttgacggggagagtaccgatgtgaagaaa
gaagatgagaaagtagatgaggaaatttcgacggaagaaacactggcgtatctagtgatg
ggctgcgttactatcctctacactccacgaacgcgagaggtgattgtcgagtgggaaggg
aatatgatgaacgatgggattgccgatgcagtcatggccgtgttacttacagtggagacc
agcccagcttctgtaaaacgctcaagcaaacaacaccgacacctgcactcgcacacccca
accctcaacttaccaaacccacactccaacctgacaccagaagaacgcctcgcccgcctc
tgcatgctgctcgaagcgcaattcgggcccaacatcgcggccatcgaaaagccaaggatc
aagcaaacctccttcgccgcggccaccaccaccaccaccacctcctcctcaacacttaac
aacaatggcacctcgacaccaagaacaacagcaacagtagcatcaactctcttaaaacca
gacccagacgccaccagcgcagtctccacctcaaccgcttcgggcacgacaattaccgca
ccctccccgtccctctctccctcacccacaccaacaccatcgcccgaagacctcactgcc
gaagacctgtacgagctcgaatctgcggagttggagcggctttacagtctcggcattccc
gtgccaggtctggagatccgggtcgacaagcatgtggcgcgtgtgtggctggagacactg
gaggtggagtgcgggtctgcggtgttgagggaccgggtgcgggtagttgttgagcgggct
gtggagacggtggcgggtttgtggaggggcccgatacaaggaggaagggggtcgagggtg
ggagtttggaaggcaaagctggagggagagggcgaaaagatggcggttagggaagggaag
ggctacggggttgattga
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integrated database retrieval system
