KEGG   Histoplasma mississippiense: HCAG_02332
Entry
HCAG_02332        CDS       T02229                                 
Name
(RefSeq) hypothetical protein
  KO
K12626  U6 snRNA-associated Sm-like protein LSm7
Organism
aje  Histoplasma mississippiense
Pathway
aje03018  RNA degradation
aje03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:aje00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    HCAG_02332
  09123 Folding, sorting and degradation
   03018 RNA degradation
    HCAG_02332
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:aje03019]
    HCAG_02332
   03041 Spliceosome [BR:aje03041]
    HCAG_02332
Messenger RNA biogenesis [BR:aje03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     HCAG_02332
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     HCAG_02332
Spliceosome [BR:aje03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    HCAG_02332
SSDB
Motif
Pfam: LSM MCM_bind TFIIA FlaX
Other DBs
NCBI-GeneID: 5448448
NCBI-ProteinID: XP_001542161
UniProt: A6QY75
LinkDB
AA seq 171 aa
MSERSSFRGGPRGGGRGGGRAGGAGGYGYRNQRGGGVGGGASYQHHQHQQQQQQGGGQGG
GQGGQQQQQQQQQQQQEKPKKENILDLTKYMEKEVCVKFNGGREVTGTLKGYDQLMNLVL
DDVREVMRDDEGNQTTRSLGLIVARGTLLVLISPVDGSEEIANPFLQAGDE
NT seq 516 nt   +upstreamnt  +downstreamnt
atgtccgaacgcagctccttccggggcggtccccggggtggtggacgcggcggaggtcga
gctggtggtgcaggcggctatggctaccggaaccagcgaggtggcggcgtgggtggcggt
gcatcgtatcaacatcaccagcatcagcagcagcagcagcagggtggagggcaaggaggc
gggcaaggcggacagcagcagcagcagcagcagcagcaacagcagcaggagaagccgaag
aaagagaatattttggacctgacgaagtatatggagaaggaggtttgtgtgaagttcaat
ggggggagagaagtcaccggcaccctcaagggctacgaccagctcatgaacctcgtcctc
gatgacgttagggaagttatgcgcgacgacgagggtaatcaaacaacccgctccctcggc
ctcattgttgcgcgtggtacgttgctcgtgctcatctcgcccgtcgatggcagcgaggag
atcgccaatccgttcctgcaggcgggagacgagtga

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