KEGG   Histoplasma mississippiense: HCAG_02441
Entry
HCAG_02441        CDS       T02229                                 
Name
(RefSeq) similar to beta-transducin
  KO
K11806  DDB1- and CUL4-associated factor 13
Organism
aje  Histoplasma mississippiense
Brite
KEGG Orthology (KO) [BR:aje00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:aje03009]
    HCAG_02441
   04121 Ubiquitin system [BR:aje04121]
    HCAG_02441
Ribosome biogenesis [BR:aje03009]
 Eukaryotic type
  90S particles
   Other 90S particles
    HCAG_02441
Ubiquitin system [BR:aje04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     HCAG_02441
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st WDR55 Beta-prop_EIPR1 Beta-prop_EML_2 Beta-prop_TEP1_2nd Beta-prop_RIG_2nd Beta-prop_CAF1B_HIR1 EIF3I WD40_RFWD3 WD40_MABP1-WDR62_2nd Beta-prop_TEP1_C Beta-prop_WDR90_POC16_2nd Beta-prop_WDR75_1st ANAPC4_WD40 Beta-prop_WDR19_1st Beta-prop_NUP159_NUP214 Beta-prop_EML Beta-prop_IFT122_1st WDR90_beta-prop_4th Beta-prop_IFT140_1st Beta-prop_SCAP MIOS_WD40 WD_LRWD1 PEP5_VPS11_N
Other DBs
NCBI-GeneID: 5449133
NCBI-ProteinID: XP_001542270
UniProt: A6QYI4
LinkDB
AA seq 328 aa
MKIKSLSRSAATLQEPGSNTSKLPRNLDPAQHPFERAREYTRALNATKLERMFAAPFVAQ
LGNGHVDGVYCLAKDPVSLERLASGSGDGVVKVWDLATRDEIWHAPAHENIVKGMCWTSD
RKLLSCAADKTIKLFDPYGSASETPPLATYFGHSAFTGVSHHESHPSFAASSSVISVYDL
SRPSSTPSQTLHWPTSTDTITSLAFNRTETSILGSTATDRSIVLYDLRTSSPVTKVILTL
ASNAISWNPMEAFNFAVANEDHNIYIFDMRKLDRALNVLKDHVAAVMDVEFSPTGEGLVS
ASYDRTVRLWDPSKGHSRDIYHTKRMQR
NT seq 987 nt   +upstreamnt  +downstreamnt
atgaaaatcaaatctctttccagatctgctgcaacattgcaggagccaggttcgaatacc
tccaagctccctcgaaaccttgatcccgcacaacatccttttgagagggcgcgggaatat
acaagggccctcaatgccacaaagcttgagcgcatgtttgctgcacctttcgtggctcag
ctaggcaatggccatgtcgatggcgtatattgtttagcaaaggatccagtgtcgctagaa
cggttggccagcggaagcggtgatggagttgtcaaggtctgggacctggctacacgggat
gaaatatggcatgctccagcacacgaaaatatcgtcaagggcatgtgctggacgtcagat
aggaaactgctctcatgcgcagctgacaaaacaataaaactattcgacccgtacggctca
gcgtctgagacccccccgctcgcaacgtattttggacattcggcattcaccggtgtttct
catcatgaaagccacccctcatttgccgcatcttcgtccgtaatatccgtgtacgattta
tctcgaccgtcctccactccctctcagaccctccactggcctacgagcaccgacacgatc
acctccctcgctttcaaccggacagaaacatccattctcggctccacagccactgaccgg
tcgatcgtattgtatgatctccgcacgtcatccccagtcacgaaagtgatcctcacgctt
gcatcaaatgccatatcctggaacccgatggaagcgttcaattttgccgttgcaaatgaa
gaccataacatatatatatttgatatgagaaaattggaccgcgcactgaacgtgctgaaa
gaccacgttgcggctgtcatggatgtcgagtttagcccgacgggagaaggattagttagt
gcttcatacgaccgcactgtacgattatgggacccgagtaaggggcattcgagggatata
taccatacgaaacggatgcaaaggtga

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