KEGG   Histoplasma mississippiense: HCAG_02506
Entry
HCAG_02506        CDS       T02229                                 
Name
(RefSeq) hypothetical protein
  KO
K10599  pre-mRNA-processing factor 19 [EC:2.3.2.27]
Organism
aje  Histoplasma mississippiense
Pathway
aje03040  Spliceosome
aje04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:aje00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    HCAG_02506
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    HCAG_02506
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:aje03041]
    HCAG_02506
   04121 Ubiquitin system [BR:aje04121]
    HCAG_02506
   03400 DNA repair and recombination proteins [BR:aje03400]
    HCAG_02506
Enzymes [BR:aje01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     HCAG_02506
Spliceosome [BR:aje03041]
 Complex B
  Other components
   Prp19 complex
    HCAG_02506
 Complex C
   Prp19-CDC5 complex
    HCAG_02506
Ubiquitin system [BR:aje04121]
 Ubiquitin ligases (E3)
  U-box type E3
   HCAG_02506
DNA repair and recombination proteins [BR:aje03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    HCAG_02506
SSDB
Motif
Pfam: WD40_Prp19 Prp19 WD40 Beta-prop_EML_2 WD40_CDC20-Fz ANAPC4_WD40 WD40_WDHD1_1st WDR55 B-prop_COPA_B_2nd EIF3I Beta-prop_WDR19_1st Beta-prop_WDR90_POC16_2nd WD40_RFWD3 eIF2A Beta-prop_EML WD40_MABP1-WDR62_1st WD40_like Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd Beta-prop_Vps41 KNTC1_N Beta-prop_NUP159_NUP214 Beta-prop_WDR19_2nd Beta-prop_IFT140_1st WD40_MABP1-WDR62_2nd NBCH_WD40 Beta-prop_SCAP Beta-prop_WDR75_1st V_ATPase_I_N Beta-prop_HPS5 Beta-prop_RIG_2nd WDR90_beta-prop_4th Beta-prop_IFT122_1st zf-Nse Ge1_WD40 Lactonase
Other DBs
NCBI-GeneID: 5448870
NCBI-ProteinID: XP_001542335
UniProt: A6QYP9
LinkDB
AA seq 476 aa
MLCAISGEAPQVPVVSRKSGNVFEKRLIEAYISENGKDPVSGEDLTVEDLVELKTARIVR
PRPPTLTSIPSLLGVFQEEWDALALETYTLKQTLAQTRQELSTALYQQDAAVRVIARLTK
ERDEARDALSKVSVGAGRVHSNGDAMQVDSTGLPPAVIARIEATQEQLSKTRRKRTVPDE
WATGETIQEYKPTDSSDAIYPGGKSLSLDQSGNLVLVGGVDGVAGIYSLAEKRIVSSLKV
DGAVTDAVWIGDKAAVATSTGAVKIFENGTEVASFNSHAGKVTSLVTHATGDIIASVGVD
KSYVLYDLAANSVITQIYSDAALTCVKFHPDGHLVAAGGTDGQIKIFDVKSGTRAANFTA
GGPLKALFFSENGTWLASVTENSSTVSIWDLRKSAEIKVLETGNRVDSISWDYTGQFLLT
GGPNGVTVQQYSKASKKWSEPLRSAVPTVAVEWRKSAQGIVTLNGDGVLTVVEAKP
NT seq 1431 nt   +upstreamnt  +downstreamnt
atgctgtgcgcaatctccggagaagctccacaggtgcctgttgtttcacgaaagagcggt
aatgttttcgagaagcgtcttatcgaggcatacatctcagagaatggcaaagacccagtt
agtggagaggaccttactgtcgaggacctggtagaactcaaaaccgcgcgcatagttcga
ccacgtccgcctaccctcacatctattccgtccctcctaggcgttttccaggaagaatgg
gatgcgctcgcactcgaaacatatactttgaaacaaactctggctcagactcgacaggaa
ctcagcacagccctttaccaacaagatgcggccgtcagggtaattgcaagactgacaaag
gaaagagatgaggctcgcgacgccttgtcgaaagtatctgtcggtgcaggtcgcgttcac
agcaatggcgatgctatgcaagtagatagcactgggctgccacctgctgttattgctagg
atagaagctacacaagagcaattatcgaaaacacgtcgcaaacggactgttccagatgaa
tgggccacaggagaaacgatacaagagtataaaccgacggatagctctgatgctatctac
ccaggcgggaagtccttatccctcgatcaatccggtaatctcgtgttggtcggaggtgtt
gatggagtagctgggatatattcactggctgagaagcggatagtatcgtcgctgaaagtt
gacggtgctgtaacggatgcagtatggataggggacaaagcggctgttgcgacttcgact
ggcgcagtgaagatatttgagaatggcacggaggttgccagcttcaattcacatgctggc
aaagtaacttcactggtaacgcacgctacgggcgacatcattgcgtctgtgggcgtggat
aaaagctatgttctctacgaccttgctgccaattctgtcatcacccaaatttacagcgat
gctgccttaacttgtgttaaattccaccctgatggccatcttgtcgctgctggtggtacc
gacggccagattaaaattttcgatgtcaaaagcggaacaagggcagctaatttcacggcc
ggcggcccactcaaggctctgttcttctcagagaacggcacgtggctagcatctgtgact
gaaaactcttcaacagtttcaatatgggatttgcgcaagtcggcggagatcaaagtgcta
gaaacgggaaaccgcgtagattccatcagttgggactatactggacaatttttattgact
ggcgggccgaatggagtgacggtacagcaatattccaaagcatccaaaaaatggtcagag
cctctgcgaagcgcggtacccacggttgcagtagagtggagaaaatcggctcaagggatt
gtgacgctgaacggcgatggcgtccttacggtggtggaagcaaagccatga

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