KEGG   Histoplasma mississippiense: HCAG_02509
Entry
HCAG_02509        CDS       T02229                                 
Name
(RefSeq) hypothetical protein
  KO
K07573  exosome complex component CSL4
Organism
aje  Histoplasma mississippiense
Pathway
aje03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:aje00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    HCAG_02509
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:aje03019]
    HCAG_02509
Messenger RNA biogenesis [BR:aje03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     HCAG_02509
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Core exosome
     HCAG_02509
SSDB
Motif
Pfam: EXOSC1 ECR1_N
Other DBs
NCBI-GeneID: 5448873
NCBI-ProteinID: XP_001542338
UniProt: A6QYQ2
LinkDB
AA seq 289 aa
MTATGSVPSIAVPGQRLGPTSSFIPGPGTHIQHSFVCASIAGPVVIQKGEEELSRQYQQQ
PISKQQRTLVSVARSFAQTQTVAGNYTAVTGNNPTSSGSTNYVQQQQPQRPPNTTSSATT
PSTTKRHKKYKYNTLPTVDSVVLARVTRVQKRQATLSILVVLDDNPSSPYPATTAAADGL
PHSLLSTTNADPLNADDLRFQALIRKEDVRAVEKDRVVMDEMFRVGDIVRAVVISLGDQS
FYYCSTARNDLGVVMGRSEEGNVLVPVSWREMVDGRSGKREGRKVARPF
NT seq 870 nt   +upstreamnt  +downstreamnt
atgacggccacgggctctgttccatcgattgccgtcccaggccagcggcttggtcccaca
tcatcgttcattccgggccctggaacccacatccaacattcttttgtctgcgcctcgata
gccggcccggtcgttatacaaaagggggaggaggagttgtcgagacaataccagcaacaa
ccaattagtaaacagcaaagaacacttgtatcggtcgcacgatcctttgcgcagacgcaa
acggttgcggggaattacacagctgtgactgggaataatcctacgagcagcggcagcacg
aactatgtacaacaacaacagccgcaaaggcctccaaacacaacatcttccgcaaccaca
ccctcaacgacgaaaagacacaaaaaatacaaatataacacactccccaccgtagactcc
gtcgtccttgctcgcgtcacccgcgtccagaagcgccaagcaaccctctccatcctcgtc
gtcctggacgacaacccttcctccccctaccccgccaccaccgccgccgccgacgggctg
ccccactcccttctctccaccacgaacgccgaccccctcaacgccgacgacctccgcttc
caagccctaatccgcaaagaagatgtgcgggccgtggagaaggaccgcgtcgtgatggac
gagatgttccgcgtcggcgacattgtgcgggccgtggtgatttcgctgggcgatcagagc
ttttactactgctcgacggcgaggaatgacctgggtgttgttatggggaggagtgaggag
gggaatgtgcttgtgccggttagctggagggagatggttgatgggaggagtgggaagagg
gaggggaggaaggttgctaggccgttttga

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