Histoplasma mississippiense: HCAG_02724
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Entry
HCAG_02724 CDS
T02229
Name
(RefSeq) hypothetical protein
KO
K06100
symplekin
Organism
aje
Histoplasma mississippiense
Pathway
aje03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
aje00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
HCAG_02724
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aje03021
]
HCAG_02724
03019 Messenger RNA biogenesis [BR:
aje03019
]
HCAG_02724
Transcription machinery [BR:
aje03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
HCAG_02724
Messenger RNA biogenesis [BR:
aje03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
HCAG_02724
U7-dependent histone pre-mRNA processing factors
HCAG_02724
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SYMPK_PTA1_N
Motif
Other DBs
NCBI-GeneID:
5449067
NCBI-ProteinID:
XP_001542553
LinkDB
All DBs
AA seq
849 aa
AA seq
DB search
MALPFDNLAEQMSQLDTARNVVLGDAALYPQIVQGILPIIGAKARIELRRWGADFLAETF
ASPALAQQPKQKLSTQVVQTLWELLENPEEDASVVKGVIQTAASIYPLVFRTIIDNSNES
ALWEKMTAIKQNILKRWDTASNNIKACCIKFVQKVVQVQTTGVISDPRRPEQNETSLSIV
PRNHPLIPLPNLEAEASGLLDRLLNVFNENSRCVSESVCTGSKTRQPPINSYSDPILVNA
TLNCLPVMIRTRQSISSKIVNAILNFNPLKQANAPMTPTIRVNIKSMERTTRALLINLMK
RNPNHPLASRIQPYLERLAQSRNDIFEEASKKRALPTEPTDLVDSAKRARLGVDTPPQLK
IPPMPPGPNSFAQLFTLTDEAGLASFDVKQLPADLIVKITVPVLSRVDPEALDQAIGAVR
SRYLTLSKKQVFEQQSSQHAAPISTAGIEEDDDYEPEYQPMDIPTGTHMPTASSIAGNEQ
FQPDLVALGPFVLPQPPPLTEEEAAEIGKGAIERVFNMISTLEQPSKSTKGSQKPGFGRL
AASSFDRDSWLVLLTRLATRASAGLEVDETDENFKAEDGRQLLLNQRITMANGIREMLYR
YVLEDFRVRINAAISWMNEEWYNDQIQLKYAATEDNGEHGNMSSKHYEKWVMRLLEGILP
YLDSKDKVLIRFLSEIPELSPKLVQKTKSLANDPERVALCVQALHYLVLVRPPAREICLD
ALQDLYTKVDEAGPLVSKILLKWRPHAIPKQENSTSKPNPTSTTQTPRTASPSTDQDANF
NPRAVSSDNASNGVKSEPGAAGIVDAQNQDIKRESESIPGSTLSGTPQQEMKGMDNTADS
SSTTTTVPG
NT seq
2550 nt
NT seq
+upstream
nt +downstream
nt
atggctctgcctttcgacaatctcgcggagcagatgtcccagctggatactgctaggaat
gttgtgcttggtgatgctgctttgtatccacagatcgttcagggcatactcccaataata
ggcgccaaggcacggatagaactacgacgatggggcgccgatttcctagcagaaactttt
gccagccccgcgctggcccaacaaccgaagcagaagctgagtacacaggtggtgcagaca
ttgtgggaattattggaaaatccagaagaggatgccagtgtcgtaaagggcgttattcaa
actgctgctagtatttacccattggtgtttagaactatcattgataactccaacgaatct
gcattgtgggaaaaaatgacagccatcaagcagaatattttaaagcgatgggacactgct
tccaataacatcaaggcttgctgtatcaaatttgtccagaaggtggtgcaggtccaaact
actggcgtcatatctgatccaaggcgtcctgagcaaaatgaaacctccttgtcaattgtg
ccgagaaatcatccacttataccactacctaatctcgaagcagaagcttctggcttgcta
gataggctactcaacgtgttcaatgaaaattcgaggtgtgtatccgaatccgtttgtacc
ggtagtaagacaagacaaccaccgattaacagttatagtgatcctatcttggtcaacgca
acgttaaattgcctcccggtcatgatacgcacccgacagtccatttcaagtaagattgta
aatgcgattcttaatttcaacccgcttaaacaagcaaatgcgccaatgactcctacaatt
cgagtaaatatcaagtccatggaacggaccacgagggcactgctcatcaatttaatgaag
aggaacccaaatcatcctttggcaagccgcattcagccatatttggaacgattagcgcag
tcgcggaatgatatattcgaagaagcatcgaaaaaacgggcgctgccaaccgaaccgact
gatctcgtagatagcgcaaagcgtgcaagacttggcgttgatactccccctcaattgaag
atccctcccatgccccctggccccaattcttttgctcagctcttcacattgaccgatgaa
gcgggtttggcatcctttgatgtcaaacagcttcccgcagacctgattgtcaaaatcacc
gttcctgtgcttagtcgagttgatcctgaggcattagatcaagctattggcgctgttcgg
tctcgttacctcacattatctaagaaacaagtcttcgaacaacaatcctcacagcatgcc
gctccaatatcaacagccggcatagaagaggatgatgactacgaaccagaatatcagcca
atggacatcccaactgggactcatatgccaacggcatcgtccattgccggaaatgaacaa
ttccaaccagatctcgttgccctcggcccttttgtcctacctcagccaccaccattaaca
gaggaagaagccgccgaaattggaaagggtgcaattgaaagggtttttaacatgatttcc
accttagagcaaccatcaaagtcaaccaaaggctcccagaaaccaggtttcgggaggcta
gcagccagctcttttgatagggattcttggttggtcttgctcactcgattggcaactcga
gcctcggccggcttggaggtggatgaaacggatgagaattttaaagctgaagacggccgc
caattgttattgaaccaacgcatcaccatggcaaacggcatcagggagatgttatatcga
tatgtccttgaagattttcgtgttcgaatcaatgccgctatttcctggatgaacgaagag
tggtacaatgaccaaatacaactgaaatatgccgccacagaggataatggtgaacatggt
aacatgtcctcgaaacactatgagaaatgggttatgaggctactggaaggcatattgcct
tatttggacagcaaggataaagtgttgattaggtttctaagtgagataccggagctcagc
ccgaagctcgtgcaaaagacgaagagtttggcaaatgatcctgaacgtgttgccctatgt
gttcaagcccttcactatcttgtcctagtgcggcctccagcaagggaaatttgcctagat
gctctccaagacctctatacaaaagtggacgaagcggggccactcgtttcaaaaatcctc
ctcaaatggcgaccacatgccattccaaagcaagagaactctacctctaaacctaaccct
acatcaacaacacaaactccacgaacagcctcgccgtcgactgaccaagacgcaaacttc
aatcccagagctgtgtccagtgacaatgcgtcgaatggtgtaaaatcagaaccaggtgct
gctggcattgtcgacgcccaaaatcaggacattaagcgcgagtctgaatcgattcctggc
tcaacattgagcggcacgccgcagcaggaaatgaaggggatggataatacggctgattcg
tcatccacaactactactgtgcctggttga
DBGET
integrated database retrieval system