KEGG   Histoplasma mississippiense: HCAG_02811
Entry
HCAG_02811        CDS       T02229                                 
Name
(RefSeq) similar to DNA-directed RNA polymerase II subunit
  KO
K03015  DNA-directed RNA polymerase II subunit RPB7
Organism
aje  Histoplasma mississippiense
Pathway
aje03020  RNA polymerase
aje03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:aje00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    HCAG_02811
  09124 Replication and repair
   03420 Nucleotide excision repair
    HCAG_02811
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:aje03021]
    HCAG_02811
   03019 Messenger RNA biogenesis [BR:aje03019]
    HCAG_02811
   03400 DNA repair and recombination proteins [BR:aje03400]
    HCAG_02811
Transcription machinery [BR:aje03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     HCAG_02811
Messenger RNA biogenesis [BR:aje03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     HCAG_02811
DNA repair and recombination proteins [BR:aje03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      HCAG_02811
SSDB
Motif
Pfam: SHS2_Rpb7-N S1
Other DBs
NCBI-GeneID: 5448334
NCBI-ProteinID: XP_001542640
LinkDB
AA seq 169 aa
MFFIHFLEHVLTLHPTFFGSHVKEYLTQKLLDDVEGVCTGDYYIVCVMDTYDISEGRVLP
GSGLAEYTIMYRAIVWKPFKGETVDAIVTSVKNQGIFAEVGPLTVFVSKHLIPPEIKWDP
DATPPQYTDNGEQVIEKGTNLRIKLIGLRNDVRNMFAIGSIKEDYLGTL
NT seq 510 nt   +upstreamnt  +downstreamnt
atgttttttatccacttcctcgaacacgtcctcaccctccacccaaccttcttcggctca
cacgtgaaggaatacctgacgcagaagctgctagatgacgtggagggcgtgtgcacgggc
gactattatatcgtctgcgtgatggatacatatgatatttcggagggaagagtactgcct
ggtagcggattggcggagtatactatcatgtacagggctattgtgtggaagccttttaag
ggggagacggtcgatgctatcgtgacatctgttaagaatcaagggatatttgcagaggtt
ggcccgctgacggtcttcgtgtcgaaacatttgattccccccgaaatcaaatgggaccct
gacgcgactccgccgcaatatactgataatggagaacaggttattgagaaggggaccaat
ctgcgcatcaaactgattgggttgcgaaatgatgtgcgcaatatgtttgcgattggaagt
atcaaggaggattatctagggacgttgtga

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