Histoplasma mississippiense: HCAG_02811
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Entry
HCAG_02811 CDS
T02229
Name
(RefSeq) similar to DNA-directed RNA polymerase II subunit
KO
K03015
DNA-directed RNA polymerase II subunit RPB7
Organism
aje
Histoplasma mississippiense
Pathway
aje03020
RNA polymerase
aje03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
aje00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
HCAG_02811
09124 Replication and repair
03420 Nucleotide excision repair
HCAG_02811
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aje03021
]
HCAG_02811
03019 Messenger RNA biogenesis [BR:
aje03019
]
HCAG_02811
03400 DNA repair and recombination proteins [BR:
aje03400
]
HCAG_02811
Transcription machinery [BR:
aje03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Pol II specific subunits
HCAG_02811
Messenger RNA biogenesis [BR:
aje03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
HCAG_02811
DNA repair and recombination proteins [BR:
aje03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
HCAG_02811
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SHS2_Rpb7-N
S1
Motif
Other DBs
NCBI-GeneID:
5448334
NCBI-ProteinID:
XP_001542640
LinkDB
All DBs
AA seq
169 aa
AA seq
DB search
MFFIHFLEHVLTLHPTFFGSHVKEYLTQKLLDDVEGVCTGDYYIVCVMDTYDISEGRVLP
GSGLAEYTIMYRAIVWKPFKGETVDAIVTSVKNQGIFAEVGPLTVFVSKHLIPPEIKWDP
DATPPQYTDNGEQVIEKGTNLRIKLIGLRNDVRNMFAIGSIKEDYLGTL
NT seq
510 nt
NT seq
+upstream
nt +downstream
nt
atgttttttatccacttcctcgaacacgtcctcaccctccacccaaccttcttcggctca
cacgtgaaggaatacctgacgcagaagctgctagatgacgtggagggcgtgtgcacgggc
gactattatatcgtctgcgtgatggatacatatgatatttcggagggaagagtactgcct
ggtagcggattggcggagtatactatcatgtacagggctattgtgtggaagccttttaag
ggggagacggtcgatgctatcgtgacatctgttaagaatcaagggatatttgcagaggtt
ggcccgctgacggtcttcgtgtcgaaacatttgattccccccgaaatcaaatgggaccct
gacgcgactccgccgcaatatactgataatggagaacaggttattgagaaggggaccaat
ctgcgcatcaaactgattgggttgcgaaatgatgtgcgcaatatgtttgcgattggaagt
atcaaggaggattatctagggacgttgtga
DBGET
integrated database retrieval system