Histoplasma mississippiense: HCAG_02921
Help
Entry
HCAG_02921 CDS
T02229
Name
(RefSeq) hypothetical protein
KO
K12879
THO complex subunit 2
Organism
aje
Histoplasma mississippiense
Pathway
aje03013
Nucleocytoplasmic transport
aje03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aje00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
HCAG_02921
09122 Translation
03013 Nucleocytoplasmic transport
HCAG_02921
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aje03019
]
HCAG_02921
03041 Spliceosome [BR:
aje03041
]
HCAG_02921
Messenger RNA biogenesis [BR:
aje03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
HCAG_02921
Spliceosome [BR:
aje03041
]
Complex C
Other components
EJC/TREX
HCAG_02921
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
HCAG_02921
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tho2
Motif
Other DBs
NCBI-GeneID:
5448480
NCBI-ProteinID:
XP_001542750
UniProt:
A6QZW4
LinkDB
All DBs
AA seq
1327 aa
AA seq
DB search
MVDDGEAVEKEYPSEDVIMATEESVPISNDSQNETPSNLPYTPLPAKSTAENLPWHPVLE
SVMEKIKITMPRSTWEVVGLPFFVTFWQLSLYDIHVPQRAYEEELERLKKRIQAISQDRS
DVSVAGTLKKEKEKKQINDLHDRILAENKTHLRCYGLNRARLQKEKDRWFVGLRGKHEAL
NIAVMEQCLLPRLLLSPIDAFYSFKMLKYLHSSGTPNFRTVGFLDQLFREQRLTAIIFHC
TSKEADNFGRFLNEILRDLTRWHADKAVYEKEAYGPKRDLPGFAMAVDQEGKPKSFLDYE
NFRRILYKWHRIFGACLKTCLSGGEYMHIRNAISVLKAVVQHFPAVNWIGRDMHTCVNNL
KTMDPRDDVKIPAASLIGDLNRREKKWLLPQAFMIVSLPAKIMEDRANSPKNESLPGDKA
KVRTPQPPSTTPKPLNASAPDFKPSETSATVNGAKPSGPGKSEVEDGEIQDAKMSEARMN
DAATKQELTKDDTQLQQIPDTSSTGERAAPSTTARTEQSETHAATQEAQPAKPVKPAESA
TASTQLPSQPPVATLAPPADTQSLGSGRGSSSPAPSRVVSKSPSETPHPPGIPKRPDVDR
HLSQSGPTVRPLPNRPEPPRSFKHSDERTAMRPPSLPEERRDSRDNRHPDRLGRFGGPDR
EKLFDHSFPNDPRGHARQNDRIGDRDRLDGPRMERDFPPRPSEDHLGRPSYRDPHASPRD
QEWPDRTNRARLPQADAFQARHESERLFRDGDIHQYRPSNVSESHDRDHPPRLSYPEPPS
HQRHEPPRPERDDTRSYGSQPPSPTTVEDSNPPNRPEKRNEREEKKLANLNAHPLSRSED
LPTGPRGDRSTHPSAGDNRHGQDSRSSYPPLTSDSSYGRLNQDSRFPSRSKEQFERLQDI
PSGPRRNPSQRGGRNAPLLQPLPIKPQASDRQPPTGPSHRLPTRNPPHQDQQSASTSSSA
PAPLDNVDTSGIHPDRLKALQAPGDDGTQPSSPPSTLPPSGPRGGGHQHSVPPTTTRGAP
GPSFPGERGRADKRFAGLSSMLQQFGGAADKPGMGTSIRGRGANRAGSNSINAPSPQSTR
PQTPVGGKAENYSDRERDRERDRERERQRDRDRQYRDRDRERDSSRRGEEESVRPSAKRD
EYRERHRDGDRDRDRGRATETSTRDQARNSRESSSRRAAQSSSTNREPVSATRRRDKRER
EEGPQESHSRVSNSDLSPLPPPPPPPPPPSDQEGRRWSSGGRGDDRNRDRERDRDRDHDR
DRDRDRERRDVGSGRGGNGGGTGNNSNNGGTWPRKRGRPAVHSMDGRSNVAGSARNGAEN
KRPRRGH
NT seq
3984 nt
NT seq
+upstream
nt +downstream
nt
atggtcgatgatggcgaagctgtggaaaaagaatatccatctgaagatgtgatcatggct
actgaagaatctgtccctatttccaatgatagccagaacgaaacgccgtcaaaccttccg
tatactccacttccagctaaatccaccgctgaaaacctaccatggcatccagttctcgaa
agcgttatggaaaaaatcaaaatcacaatgccaagaagcacatgggaggttgttggtctt
ccattctttgtaacgttttggcaactgtcactgtatgacattcatgttcctcaacgcgct
tacgaagaggaactggaacgtctcaagaaaaggatccaggctatctcccaagacaggtcc
gatgttagcgttgctggtactttgaaaaaggagaaagaaaaaaaacaaattaacgacctc
cacgaccgaattctagcggagaacaagacccatcttagatgttacggtttaaatcgtgca
agattacagaaagaaaaggaccggtggtttgttggattgagagggaaacacgaagccctc
aacattgcggtcatggaacagtgtctattacctcgactacttctctcccctattgacgct
ttctacagtttcaagatgctcaaatacctacactcctcaggaacacccaatttccgaacg
gtgggattccttgaccaattgtttcgcgagcagcgtttgactgcaataattttccattgt
acatctaaggaagctgacaattttggtcgtttcctcaacgagatactgcgtgatttaact
cgatggcatgccgacaaggctgtctacgagaaggaagcgtacgggcctaaaagggacctc
ccaggattcgccatggctgtggaccaagagggaaagccgaagtcttttttggactatgag
aatttccgtcgaattttgtacaagtggcaccgcatttttggcgcttgcttaaagacctgt
ctttcaggaggcgaatatatgcatatccgcaatgccatcagcgtattgaaggccgtggtc
caacatttccctgcagttaactggattggccgagatatgcatacttgtgttaacaacctg
aaaaccatggatccacgtgacgatgtcaaaattccagctgcttcattgattggggatttg
aatagaagggaaaagaagtggttacttccacaagcgttcatgattgtgagtctacctgcg
aaaattatggaggacagagctaattcgccaaagaatgaatcattaccgggtgacaaggcc
aaagtacggacaccgcagcccccgtcaactactcccaaaccacttaatgcttcagctcct
gactttaaaccatctgagacgtcagccacggtaaatggtgcgaagccttcagggcccggg
aaatcagaggttgaagatggcgagattcaagacgcgaaaatgtcagaagctagaatgaac
gatgcagccacaaaacaagaactgacaaaggatgacacccaattgcaacaaatacctgac
acctctagcaccggagaacgcgccgctccaagtacaacggcgcgaacagaacagagtgaa
actcacgcggcaacacaagaagcgcagccagcgaaaccagtgaagcctgcggagtctgca
acggcttctacacaactcccttcacagccccccgtggccactcttgcgcccccagcagat
acacaatcccttggttcgggtcgtggttcatcctcacctgcaccgtcacgagtagttagt
aaatcaccttctgaaacaccccacccgccaggcatcccaaaacgtccggatgtagatcga
cacctttctcagtctggccctaccgtccgccctctccctaaccgaccggaacctcctcga
tcatttaaacattctgatgagcgaactgccatgaggccacccagccttccagaagaacga
agagattctagagacaatagacatccagatcgccttggacgatttggtggaccggatcgc
gagaagctgtttgatcattccttccctaacgatccccgaggccatgctcgccaaaatgac
cggattggggatagagataggcttgatggccctcggatggagagagattttcctccacgg
ccctccgaagatcatcttggacgtccaagctacagagacccgcacgcctctccaagagat
caggaatggcctgacaggacgaacagagcgaggttgccccaagcagacgccttccaagct
cggcatgaatcagagcgcctttttagagatggcgatatacatcaatatcgaccttctaat
gtttcagaatctcacgatcgagaccatcctccacgcttgtcttaccctgaacccccatct
caccagcgacatgagcctccaagacctgaacgggacgatacaagaagctatggctcacaa
cctcctagccctaccacagttgaggactccaatcctcctaatagacctgagaagcgaaat
gagcgtgaagagaagaaacttgcgaatcttaatgctcacccattatcacgctcagaggat
ctcccaacggggccaagaggagacagatccactcatccctcagcgggtgataaccgtcat
ggccaagactcgcgatcatcgtacccgccactaacgtcagactcgtcctatggcaggttg
aatcaagattcgagatttccctcacgctcgaaggagcagtttgagaggcttcaagatatc
ccgtcaggcccaaggagaaatccttcccagcgtggtgggagaaacgctccgttgttgcag
cctcttccaattaagccacaggcttcggaccgccagccacccacaggaccatctcaccga
ctacccacgcggaatcctccccatcaggatcagcagtccgcctcaacttcgtcatctgcg
cctgctcccctggacaatgttgacacgtccggcattcatcctgaccgcctaaaagcacta
caagctcccggggacgatggaactcaaccgtcttcgcctccatcaaccttaccaccttcc
ggtcctcggggtggtggccatcaacattctgtccctccgacaaccactcgaggcgcacct
ggaccttcatttccaggagagagggggcgggcagataaacgatttgcaggcttgagtagc
atgcttcagcaatttgggggtgcagcagataaacccgggatggggacttcaataagggga
agaggcgcgaatcgcgctggtagcaattcaatcaatgctccatcacctcaatctaccaga
ccgcaaactccagttggagggaaggctgaaaattattctgatcgggaaagagatcgtgaa
cgggaccgtgagagagaacgccaaagagacagggaccggcaataccgagatcgggaccga
gagcgcgactccagtcgtagaggtgaagaggaaagtgtgaggcccagtgctaaacgggat
gagtatcgagaacgccatcgagacggggatcgtgaccgtgatagaggtcgggcaacagaa
accagcactagggaccaagctcgcaactcacgagaatcctcatcgcgaagagctgcgcag
agctcgagcacaaacagggagcctgtctccgctaccaggcgaagggacaagcgagaacgt
gaagaggggccccaagagagccacagccgtgtcagtaattctgacctttccccgctgcca
cctccaccgcctcccccaccgcctccaagcgatcaggaaggccgcagatggagtagtggt
ggtcgaggtgacgatcgcaatagagatcgtgagcgggaccgggaccgggaccacgatcgc
gatcgagatcgagatcgagagcgtcgagatgtgggtagcggtcgtggaggtaatggtggt
gggacaggcaacaacagcaacaatggaggcacttggcccaggaaacgcggaagacccgct
gtccacagcatggatggccgatccaacgttgccggttccgcgagaaatggagctgaaaat
aaaagacccagacgcggccattga
DBGET
integrated database retrieval system
