KEGG   Histoplasma mississippiense: HCAG_03024
Entry
HCAG_03024        CDS       T02229                                 
Name
(RefSeq) hypothetical protein
  KO
K15176  RNA polymerase-associated protein CTR9
Organism
aje  Histoplasma mississippiense
Brite
KEGG Orthology (KO) [BR:aje00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:aje03021]
    HCAG_03024
Transcription machinery [BR:aje03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    PAF1 complex
     HCAG_03024
SSDB
Motif
Pfam: TPR_2 TPR_1 TPR_19 TPR_14 TPR_12 TPR_8 TPR_16 TPR_11 TPR_17 ANAPC3 TPR_6 TPR_CcmH_CycH TPR_7 ARM_TT21_4th TPR-S
Other DBs
NCBI-GeneID: 5449059
NCBI-ProteinID: XP_001542853
UniProt: A6R067
LinkDB
AA seq 1227 aa
MATVQNGYTNGSLTEQGILTHYRFSDIPSAIDIPASTFDSEVEISLEELPDDPTELCTLL
DNEKAAKNFWVIIALAYAKQNQIDHAIDILNRGLSSLAQGVTKEKLGLLGWICWLYMRKS
REAPRVAPEGQLVSEAKTKDYYLQAATSTLNEASRLNPAYPSLFLARGVLSILRASLQPP
AKALRPGMVDTSERVETLRQALKCFDESAKSFGNRNGMAILGRARAQYMLGRYAEALEGY
QEGSDKNAEYERSWILRLELGGCLWQLDFKRQAKAAGLVLWLCSRHATNDPAFGSLYKIA
MTQYTQKAFKVDKEYPMTCSMFGGYFLLRKHFPTVEALARKAIELTDVNAIASDGWYLLA
RKEHFEGNSARANEYYTRSDQARGGGDRGYLPAKFGAVQMQVRTGDYDGAKFRLEKIIQQ
TKNPESMTLLGALFAEEVFAAQSSPLKEDKSAEVKKATSLLESVRASWKDEKKKLSPDES
VLLYLARLYESGSPEKSMQCLQHVEQMQLAQIPDTERPEDIHDEETTTNLLREHLAPQLL
NNMGCFLYHSEKIELARNMFQTALNACVKSRDRDDSADTDAFVTTISYNLARTYEAASMP
EEAKKVYEGLLERHSDYTEANARLTYIALRQSPTDEGPKKMAKLYELESTNLEVRALFGW
YLSKSKRRVANIAEDHEQRHYKHTLQGYDKHDRYSLTGMGNIFLLAARDMRRDTEQDREK
RRKMYEKAVEFFDKALQLDPKNAYAAQGIAIALVDDRKDYTTAVQIFSRIRDTLRDASVY
LNLGHVYAELRQFSKSIENYEAALSKDRQRDTQILACLGRVWLLKGMQEMNLAAMNTALD
CTQRARAIAPEQIHLEFNVAFVQNQIAQLVVSLPETQKSLQDVQIASDGLDEAINTFSQI
AKAKHPPYPRGSLEQRANMGKNTIRRKLERTLQSQGEYEEKNATKLQQAREARETELRRR
EEEKRKVEEAELERKRQIAEDRQRLIEEAQRLAAIRAEEERAREEAEYTTDSETGDKVKR
KKKAAAASKRKKKDAGDDSGAAGRKSKDRSTGPESELESDAEDHPAPRKRRRLERRSTTK
SSKYKSSEIVVESESEDGEEGAGSGTREANGANRDAGSPVSDRDEDDDMRDTTAGGVSVD
EDKDADAVVRRRRTKLNLRIEDDEDEEGESEVESAGKKARPASPDAEPNDEDDLFEEKSG
DEAMDRAGSGDRDTEMKDRTDEDEDEE
NT seq 3684 nt   +upstreamnt  +downstreamnt
atggcaactgtccaaaatggatataccaacggctcgctcacagagcaaggcatcctaaca
cactaccgtttctccgatatcccctctgccatcgacatccccgcctccacattcgatagt
gaggtcgaaatcagtctcgaagagcttcctgacgatcccaccgagctctgcacactcctc
gacaacgaaaaagctgcgaagaacttctgggttatcattgcgcttgcatacgcgaaacaa
aaccagatcgatcatgccatcgacatcctcaatcgcggtctctcgtccctcgcgcagggc
gtgacgaaggagaagctcggtctcctaggatggatatgttggctatatatgcgaaagagc
agagaggccccccgcgtcgcgccggaaggccagctggtgtccgaagcgaagactaaagat
tactatctccaggcggctacgtcgactctaaacgaggcgtcgcgattaaatcccgcatac
ccttcccttttcctcgcacggggcgttctatcgatcttgcgcgcttccttacaacccccc
gccaaggctcttagacctgggatggtcgatacttcggaacgggtagagaccttgcgccag
gccttgaaatgtttcgatgagtcggcgaaatcctttggtaaccggaatggtatggccatt
ctcgggagggcgagggcacagtatatgttaggtagatatgccgaggcactggagggttat
caggagggttctgataaaaatgccgaatatgagagatcctggatcctccgattggaattg
ggtggctgtctctggcaactagacttcaagaggcaagcgaaagctgctggactcgtgctt
tggctctgctctcggcacgcaaccaacgacccggctttcggctctttgtacaaaatagcc
atgacgcagtacacgcagaaagcattcaaagtggacaaggaatatcccatgacctgttcc
atgtttggcggctatttcttactccgcaaacatttcccaactgtcgaagcgctagcccgc
aaggcgattgaactcactgatgttaacgcgattgctagtgatggatggtatttactcgcg
cgaaaggaacactttgaaggcaactctgcaagagccaacgagtattacacccggtcagac
caggcccgaggtggtggggatagaggatacctgccggcgaaattcggcgctgtgcaaatg
caagtgaggaccggtgactatgatggggccaaatttcgtctggaaaagattatccagcag
acgaagaatccagagtcgatgaccctgcttggggctctctttgcggaggaagtgtttgca
gcccagtctagcccgctcaaagaggacaagtccgctgaagtgaagaaagccacgagcctc
ctcgagtccgtgcgtgcgtcgtggaaagatgagaagaaaaaactttcgcctgatgagtct
gttttactttatcttgcacgactgtacgagagtggttcgccagagaagagcatgcagtgc
ctgcagcatgtcgagcagatgcagctggctcagatcccggataccgagcggcccgaggat
atccatgatgaggagacaacaacgaacctccttcgggaacatttggcgcctcagctgttg
aacaatatgggctgcttcttgtatcattctgagaagatagaacttgcacggaatatgttc
cagacagccctcaatgcttgcgtgaaatctcgtgacagagatgattcggccgacaccgat
gctttcgttaccacaatcagctataatctcgccagaacttatgaggccgcgtccatgccc
gaggaagccaaaaaggtatatgaaggacttctggagaggcatagtgattacaccgaagcc
aatgcccgattgacatatatcgctctccgccaaagcccaacagacgaaggacccaagaaa
atggccaaattatatgaactagagtctacaaatcttgaagtccgtgctctgtttggctgg
tacctaagcaaatcgaagagaagggtagcaaatatcgccgaagaccacgaacaacgtcac
tacaagcatacacttcagggatatgataaacatgacaggtactcgcttacgggaatgggc
aatatcttcctccttgccgctcgagacatgaggcgcgatacagagcaggatagagagaaa
cgaagaaagatgtacgagaaggctgtggagttctttgataaggcgctacaacttgatccg
aagaatgcttatgcggcgcaggggattgctattgcattggttgatgatagaaaggattac
acgactgcggtacagatcttctcacgcattcgagacacactgcgcgacgcgagcgtctac
cttaatcttggacatgtgtatgctgagcttaggcaattttctaagtccattgagaactac
gaagccgctctctccaaggatagacaacgcgatacccaaattctagcctgtctcggccgt
gtctggctcttgaaaggcatgcaagaaatgaacctggcggctatgaataccgccctggac
tgtacccaacgcgctcgcgccattgcccccgaacaaatccaccttgaatttaacgtcgca
ttcgtccaaaaccagatcgcgcaactggtagtctctctcccggaaacccaaaagtcgctc
caagacgtccaaatcgcttccgacggccttgatgaagcgatcaacaccttcagccaaatt
gcgaaagccaagcatccaccttacccccgcggctctttggagcagcgcgcgaacatgggc
aaaaataccatccgcagaaagctggagcggacgctacagagccagggggaatacgaggag
aagaacgccacgaagttacagcaggcgcgggaggcgcgggagactgaattgaggaggcgc
gaagaggagaagcggaaggtggaggaggctgagttggaacggaagagacagattgctgag
gaccggcagcggctaattgaggaagcgcagcgccttgctgcgatacgtgcagaggaagag
cgggctagggaagaagcagagtataccactgactccgagaccggggataaggtgaaaaga
aagaagaaggcggcggcggcgagtaagcggaagaaaaaggatgctggggacgatagtggt
gcggcagggaggaagtctaaggatcggagtacgggtccagaaagtgagctggaatctgat
gcagaagatcaccccgcgccgcggaaacggagacggctggagagacggtccactactaag
tctagtaagtataaaagtagtgagattgtggttgagtctgagagtgaggacggcgaagaa
ggcgcaggatctgggaccagggaagcgaatggggctaatcgtgatgctggttcccccgtt
tcggatcgtgacgaggatgacgatatgcgtgatactactgctggaggggtctctgtggat
gaggataaggatgctgatgctgttgtgcgacggcggcggacaaagttgaatcttcgcatt
gaggatgatgaggatgaagaaggggagagtgaagtggagagtgcagggaagaaagctcgc
cctgcctcgccggatgcggagccaaatgacgaggatgatctttttgaggagaaaagtggt
gacgaggccatggaccgtgctggtagtggggatagagatacggagatgaaggatcgcacg
gatgaagatgaagatgaagagtaa

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