Histoplasma mississippiense: HCAG_03024
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Entry
HCAG_03024 CDS
T02229
Name
(RefSeq) hypothetical protein
KO
K15176
RNA polymerase-associated protein CTR9
Organism
aje
Histoplasma mississippiense
Brite
KEGG Orthology (KO) [BR:
aje00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aje03021
]
HCAG_03024
Transcription machinery [BR:
aje03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
HCAG_03024
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_19
TPR_14
TPR_12
TPR_8
TPR_16
TPR_11
TPR_17
ANAPC3
TPR_6
TPR_CcmH_CycH
TPR_7
ARM_TT21_4th
TPR-S
Motif
Other DBs
NCBI-GeneID:
5449059
NCBI-ProteinID:
XP_001542853
UniProt:
A6R067
LinkDB
All DBs
AA seq
1227 aa
AA seq
DB search
MATVQNGYTNGSLTEQGILTHYRFSDIPSAIDIPASTFDSEVEISLEELPDDPTELCTLL
DNEKAAKNFWVIIALAYAKQNQIDHAIDILNRGLSSLAQGVTKEKLGLLGWICWLYMRKS
REAPRVAPEGQLVSEAKTKDYYLQAATSTLNEASRLNPAYPSLFLARGVLSILRASLQPP
AKALRPGMVDTSERVETLRQALKCFDESAKSFGNRNGMAILGRARAQYMLGRYAEALEGY
QEGSDKNAEYERSWILRLELGGCLWQLDFKRQAKAAGLVLWLCSRHATNDPAFGSLYKIA
MTQYTQKAFKVDKEYPMTCSMFGGYFLLRKHFPTVEALARKAIELTDVNAIASDGWYLLA
RKEHFEGNSARANEYYTRSDQARGGGDRGYLPAKFGAVQMQVRTGDYDGAKFRLEKIIQQ
TKNPESMTLLGALFAEEVFAAQSSPLKEDKSAEVKKATSLLESVRASWKDEKKKLSPDES
VLLYLARLYESGSPEKSMQCLQHVEQMQLAQIPDTERPEDIHDEETTTNLLREHLAPQLL
NNMGCFLYHSEKIELARNMFQTALNACVKSRDRDDSADTDAFVTTISYNLARTYEAASMP
EEAKKVYEGLLERHSDYTEANARLTYIALRQSPTDEGPKKMAKLYELESTNLEVRALFGW
YLSKSKRRVANIAEDHEQRHYKHTLQGYDKHDRYSLTGMGNIFLLAARDMRRDTEQDREK
RRKMYEKAVEFFDKALQLDPKNAYAAQGIAIALVDDRKDYTTAVQIFSRIRDTLRDASVY
LNLGHVYAELRQFSKSIENYEAALSKDRQRDTQILACLGRVWLLKGMQEMNLAAMNTALD
CTQRARAIAPEQIHLEFNVAFVQNQIAQLVVSLPETQKSLQDVQIASDGLDEAINTFSQI
AKAKHPPYPRGSLEQRANMGKNTIRRKLERTLQSQGEYEEKNATKLQQAREARETELRRR
EEEKRKVEEAELERKRQIAEDRQRLIEEAQRLAAIRAEEERAREEAEYTTDSETGDKVKR
KKKAAAASKRKKKDAGDDSGAAGRKSKDRSTGPESELESDAEDHPAPRKRRRLERRSTTK
SSKYKSSEIVVESESEDGEEGAGSGTREANGANRDAGSPVSDRDEDDDMRDTTAGGVSVD
EDKDADAVVRRRRTKLNLRIEDDEDEEGESEVESAGKKARPASPDAEPNDEDDLFEEKSG
DEAMDRAGSGDRDTEMKDRTDEDEDEE
NT seq
3684 nt
NT seq
+upstream
nt +downstream
nt
atggcaactgtccaaaatggatataccaacggctcgctcacagagcaaggcatcctaaca
cactaccgtttctccgatatcccctctgccatcgacatccccgcctccacattcgatagt
gaggtcgaaatcagtctcgaagagcttcctgacgatcccaccgagctctgcacactcctc
gacaacgaaaaagctgcgaagaacttctgggttatcattgcgcttgcatacgcgaaacaa
aaccagatcgatcatgccatcgacatcctcaatcgcggtctctcgtccctcgcgcagggc
gtgacgaaggagaagctcggtctcctaggatggatatgttggctatatatgcgaaagagc
agagaggccccccgcgtcgcgccggaaggccagctggtgtccgaagcgaagactaaagat
tactatctccaggcggctacgtcgactctaaacgaggcgtcgcgattaaatcccgcatac
ccttcccttttcctcgcacggggcgttctatcgatcttgcgcgcttccttacaacccccc
gccaaggctcttagacctgggatggtcgatacttcggaacgggtagagaccttgcgccag
gccttgaaatgtttcgatgagtcggcgaaatcctttggtaaccggaatggtatggccatt
ctcgggagggcgagggcacagtatatgttaggtagatatgccgaggcactggagggttat
caggagggttctgataaaaatgccgaatatgagagatcctggatcctccgattggaattg
ggtggctgtctctggcaactagacttcaagaggcaagcgaaagctgctggactcgtgctt
tggctctgctctcggcacgcaaccaacgacccggctttcggctctttgtacaaaatagcc
atgacgcagtacacgcagaaagcattcaaagtggacaaggaatatcccatgacctgttcc
atgtttggcggctatttcttactccgcaaacatttcccaactgtcgaagcgctagcccgc
aaggcgattgaactcactgatgttaacgcgattgctagtgatggatggtatttactcgcg
cgaaaggaacactttgaaggcaactctgcaagagccaacgagtattacacccggtcagac
caggcccgaggtggtggggatagaggatacctgccggcgaaattcggcgctgtgcaaatg
caagtgaggaccggtgactatgatggggccaaatttcgtctggaaaagattatccagcag
acgaagaatccagagtcgatgaccctgcttggggctctctttgcggaggaagtgtttgca
gcccagtctagcccgctcaaagaggacaagtccgctgaagtgaagaaagccacgagcctc
ctcgagtccgtgcgtgcgtcgtggaaagatgagaagaaaaaactttcgcctgatgagtct
gttttactttatcttgcacgactgtacgagagtggttcgccagagaagagcatgcagtgc
ctgcagcatgtcgagcagatgcagctggctcagatcccggataccgagcggcccgaggat
atccatgatgaggagacaacaacgaacctccttcgggaacatttggcgcctcagctgttg
aacaatatgggctgcttcttgtatcattctgagaagatagaacttgcacggaatatgttc
cagacagccctcaatgcttgcgtgaaatctcgtgacagagatgattcggccgacaccgat
gctttcgttaccacaatcagctataatctcgccagaacttatgaggccgcgtccatgccc
gaggaagccaaaaaggtatatgaaggacttctggagaggcatagtgattacaccgaagcc
aatgcccgattgacatatatcgctctccgccaaagcccaacagacgaaggacccaagaaa
atggccaaattatatgaactagagtctacaaatcttgaagtccgtgctctgtttggctgg
tacctaagcaaatcgaagagaagggtagcaaatatcgccgaagaccacgaacaacgtcac
tacaagcatacacttcagggatatgataaacatgacaggtactcgcttacgggaatgggc
aatatcttcctccttgccgctcgagacatgaggcgcgatacagagcaggatagagagaaa
cgaagaaagatgtacgagaaggctgtggagttctttgataaggcgctacaacttgatccg
aagaatgcttatgcggcgcaggggattgctattgcattggttgatgatagaaaggattac
acgactgcggtacagatcttctcacgcattcgagacacactgcgcgacgcgagcgtctac
cttaatcttggacatgtgtatgctgagcttaggcaattttctaagtccattgagaactac
gaagccgctctctccaaggatagacaacgcgatacccaaattctagcctgtctcggccgt
gtctggctcttgaaaggcatgcaagaaatgaacctggcggctatgaataccgccctggac
tgtacccaacgcgctcgcgccattgcccccgaacaaatccaccttgaatttaacgtcgca
ttcgtccaaaaccagatcgcgcaactggtagtctctctcccggaaacccaaaagtcgctc
caagacgtccaaatcgcttccgacggccttgatgaagcgatcaacaccttcagccaaatt
gcgaaagccaagcatccaccttacccccgcggctctttggagcagcgcgcgaacatgggc
aaaaataccatccgcagaaagctggagcggacgctacagagccagggggaatacgaggag
aagaacgccacgaagttacagcaggcgcgggaggcgcgggagactgaattgaggaggcgc
gaagaggagaagcggaaggtggaggaggctgagttggaacggaagagacagattgctgag
gaccggcagcggctaattgaggaagcgcagcgccttgctgcgatacgtgcagaggaagag
cgggctagggaagaagcagagtataccactgactccgagaccggggataaggtgaaaaga
aagaagaaggcggcggcggcgagtaagcggaagaaaaaggatgctggggacgatagtggt
gcggcagggaggaagtctaaggatcggagtacgggtccagaaagtgagctggaatctgat
gcagaagatcaccccgcgccgcggaaacggagacggctggagagacggtccactactaag
tctagtaagtataaaagtagtgagattgtggttgagtctgagagtgaggacggcgaagaa
ggcgcaggatctgggaccagggaagcgaatggggctaatcgtgatgctggttcccccgtt
tcggatcgtgacgaggatgacgatatgcgtgatactactgctggaggggtctctgtggat
gaggataaggatgctgatgctgttgtgcgacggcggcggacaaagttgaatcttcgcatt
gaggatgatgaggatgaagaaggggagagtgaagtggagagtgcagggaagaaagctcgc
cctgcctcgccggatgcggagccaaatgacgaggatgatctttttgaggagaaaagtggt
gacgaggccatggaccgtgctggtagtggggatagagatacggagatgaaggatcgcacg
gatgaagatgaagatgaagagtaa
DBGET
integrated database retrieval system