Histoplasma mississippiense: HCAG_03214 Help Entry HCAG_03214        CDS       T02229                                  Name (RefSeq) hypothetical protein   KO K10706   ATP-dependent RNA/DNA helicase, senataxin [EC:5.6.2.5 5.6.2.3] Organism aje  Histoplasma mississippiense Brite KEGG Orthology (KO) [BR:aje00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:aje03021]     HCAG_03214 Enzymes [BR:aje01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.3  DNA 5'-3' helicase      HCAG_03214     5.6.2.5  RNA 5'-3' helicase      HCAG_03214 Transcription machinery [BR:aje03021]  Eukaryotic type   RNA polymerase II system    Other transcription-related factors     Transcription termination factor      HCAG_03214 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  SEN1_N AAA_11 AAA_12 SEN1_barrel UvrD-helicase AAA_30 Viral_helicase1 AAA_19 DEAD nSTAND3 zf-CCHC zf-CCHC_5 ResIII T2SSE Motif Other DBs NCBI-GeneID:  5447788 NCBI-ProteinID:  XP_001541117 LinkDB All DBs AA seq 2150 aa AA seqDB search MAELMDVLEELKALPEQLHMLCPRQNDDDMGLYNDEHIHSLDPTDPDVKPNVENLNRISE ATSRRQKFLSSMRLLAFSGDEVEIQQEWIWRRLEHDLEKCDLCIKEYYKGKVWLMDMLGE SYDELEVEKFGRIIDEQDIKRIVKNLDRATEILKTVAPQQRSLSVLDRAALLSIFEAMSS KAMLNEDDILRAHFDEPFTLVQSNRTLKMPEYIPATTQFLFDANDQRRRWAFTSWGRMKA PPTTPEFDWAVKEPLLVALRKASCPPVQPDLVRRLWEGIHAIVQRLDKEQITHNLRALEI DPCRLSVDHLAVPTPGLRSLLNTVQIFLEKAPSDFWDAMQTISPQAIIEQIFYNPQFDAF LLESRDDNPFEKPSPLRDMLSWIEPFMASLQGTHQPQACRILVFQLLTRLQDSRFPAISR YICFRSGLSTLVSTLRTFTDNESTRGSVARVVLSDTLEVTSDNIGYFMEPPEFPIEGSKK VISGLCVDVIRNALALECQSLKSDYEVILRRKPMAHGVSTYSAKIWDAVVQHLHEDNLGL SNAALMGILPLVGLEKFSTKGENSKEKTHFNVIYGHLTHLACQILERLADFKPEHLDNLF KSHDTNGSLISALFSADLNTYQAAVDLIKTISGQSGRKEAISHLLQSFCATTMYGFSFSF RRISNMKTFASAPRMLKTGTDIIDVLCDSETGILRTRKLVDRVEAVSLQRLWEYQWQALS TIFQQTETWHLMGNDRMVMLEFCRDTIQFAELLFNQFTIFASSISEFDPSESQSAKENLV KAPAVTLDSMVRWLRLKDDYLATTLVGLVAKLLRRMGELDVTLAGDTLKYIEDVARTSLI KTILTAQEKAELVRALESYYKKPFVTVQNTTVQKKKKQTTITSYAKPIDLTSVSSPSKIS GSDEDEFDDIPDEVLMQLSGSVELNKARIAAQKRPEKSAIPSKSAPRPINPVTNVLSFRE KREREKEEKKRRDLAELARLKKKLPSQTANQGSGLQGINVNIDERGPVESMMVSDSDSDA DSEDSDGDDGDAPGRKATSKPDAVKAYEESRRKLISQRGPVRKVKLVRSAKDMRARLSPD LSLLHRTLLSWEFFANGDLPPNSGRTDYSLVSNTFADAADYQKTFEPLLILEAWQSFQSA KEEGGFKAFEIKVSNRMSVDAFVEVITFMQPTEAKDLGLAESDLVLLSKSNNPSSDEKAP HCLARIFRSIKKKGMMEISYRINPSNPLMSSILPGASLYAARVASLTPVEREYGALMALK YYDLSEEIIKAKPSPILNYSLESLKPIIDTYKVNPAQAKAVRSAMDNDAFTLIQGPPGSG KTKTIVALVGAILTPVFAEQKITRPGSSGDFRPVTRATTCGKLLVCAPSNAAVDELVMRF KEGVITSSGQKQNISVVRLGRSDAINSNVMDVTLDELVNAKLGQNGRKNGSEKDLQTYYS EHKGACTQFNEIRERLDQCRAKGQHVPSELEREFDLLKRKKAQLSQAIDNARDSNQAAAR NADLARKKVQQEIINGSHVICATLSGSGHEMFQSLSIEFETVVIDEAAQSIELSALIPLK YGCSKCILVGDPKQLPPTVLSKVASRFQYEQSLFVRMQANHPKDVHLLDTQYRMHPEISR FPSAAFYDGRLKDGPDMAKLRVRPWHSSELLGPYRFFDVQGLHSSAPKSHSLVNLAELRV AMKLYERLTIDYLTYDFKGKIGIITPYKGQLREMKNQFANKYGSSIFTTVEFNTTDAFQG RECEVIIFSCVRASNRGIGFLADIRRMNVGLTRAKSSLWVLGNSQSLVQGEFWNGLITDA QSRNLYTQGDILKLLQRPQISLDMELKDVQMIDAPSAKSSPPSRNGSMTPGWHGSSRPSS ALSTGRVSSTHPASSRDTPGHSPTLVPSTGPEGPSGGKFGLNDLAMCGFCGSYEHMTTNC DNAEAKMASHGACWRCGDVSHSKRDCKAERCLRCGAFGHSARQCTSTVVLSKQEKDKIAR DEHHHAQAQKANIERQRQKQLGDHDPKVPVIQVPSKVASNAPSSAGILHQGQGLQDSPNA DQGNSGKRKRMETDLPSSRPNLKVRKPNAQFNAQFAAPLNAPKGPRGKKLDPHIVAPPTS DLVIPSKSEQGHQPIASKDQQLSRARSGTEQEKQTTNVSSGKFFSPILSS NT seq 6453 nt NT seq  +upstreamnt  +downstreamnt atggcggagctgatggacgttctcgaggaattaaaagccctcccagaacagctacatatg ctctgtccccgccaaaacgatgatgacatgggactgtacaatgatgaacatatccattcc cttgacccgaccgacccagatgtgaaacccaatgtcgagaatctcaatcgtatctccgaa gccacctcgcgaagacagaaattcctatcctccatgcgtcttcttgcgttcagcggcgat gaagtcgagatccagcaggaatggatatggaggcgactcgagcacgacttggagaaatgc gacttgtgcattaaggaatattataagggaaaggtgtggctgatggatatgttgggcgag agctacgatgagttggaggtcgagaagtttggcagaatcattgatgaacaggatattaag cggattgtgaagaacttggatcgggcgacggagatattgaagactgttgcaccccaacag cgaagtctttcggtcttggatcgtgcagccttgttatcgattttcgaagccatgagctca aaggcgatgctgaacgaggacgacatactccgggcccattttgacgaaccgtttaccttg gtgcaaagcaaccggacattgaagatgcccgaatatatacccgcaaccactcagtttctt tttgatgcgaatgatcaacgccgccggtgggcgttcacttcatggggaaggatgaaagca ccccctaccaccccagagttcgactgggcagtcaaggagccgctacttgtagctcttcgc aaggcgtcttgccctcctgttcaaccagatctagtccggaggctgtgggagggcatccat gctattgtacaacggctagataaagaacaaatcactcacaaccttagagctttagaaatt gacccttgtcgattatcagttgaccaccttgctgtcccaacaccaggtttacgctcacta ttgaacaccgttcaaatttttctcgagaaagcgccaagtgatttctgggacgctatgcaa accatttccccgcaggctatcattgaacagatcttttataacccccagttcgatgcgttt ttacttgagtcgcgcgatgataatccctttgagaaaccttcacctttgagggatatgttg tcatggatcgagccgttcatggcttctcttcaaggcacacaccagcctcaagcatgcaga atacttgttttccaacttctcaccaggctacaggactcacgctttccagcaatttcgaga tatatttgctttcgaagcggactgtccaccctcgtttctacattgcggaccttcacggat aacgagtcaacaagaggttccgttgccagggttgttctatctgacactcttgaagttaca agtgataatatcggctatttcatggaacctcctgaatttccgatcgaaggaagtaaaaaa gttatctccggcctatgcgtggatgtaattcgaaacgcccttgctctagaatgtcagtcc ttgaagtctgactacgaggttattcttcgtcggaaacctatggcgcatggcgtgagcacg tactctgctaagatttgggatgctgttgtccagcatctgcatgaggataatcttgggctt tccaacgctgctctcatgggtattttgccccttgttggattagagaaattctccaccaaa ggcgagaatagcaaggagaaaacgcatttcaacgtcatctacggacacttgacacacctt gcttgtcagatccttgaaaggctagctgactttaagccggaacatttggataatttattt aagagccacgacacgaatggctcgttgatttcggcccttttctccgccgatctaaatacc tatcaagctgcagtagatcttatcaaaactattagtggtcaatctggccgcaaggaggca atatctcacctcctacagtccttctgtgcgacgacgatgtacgggttcagcttctcattc cgacgaatatccaacatgaaaacttttgcatctgcccctcggatgctaaaaactgggact gatattatagatgtgctctgcgactctgaaactggcattcttagaacgcgaaaacttgtt gatcgcgtggaggccgtttcccttcagagactatgggaatatcaatggcaagctctctcc actatattccagcaaacggagacctggcatttgatgggaaatgataggatggttatgcta gaattttgccgcgatactatccagtttgcggagcttcttttcaaccaattcactatcttt gcgagcagtatttccgaatttgacccttccgagtcccaatcagcaaaggaaaacctggtc aaagcccctgcggtgacattggactccatggtcagatggcttcgtttgaaagatgattat ttagcgaccacattagtaggccttgttgcgaagcttctccggcgtatgggagaattagac gtaacccttgctggagatactttgaagtatattgaggatgtggctcgaacttctctcatc aaaaccatattaactgcgcaggaaaaggctgagcttgtgagagctctcgaatcatactat aaaaagccattcgtaacagtgcagaataccactgtccaaaagaaaaagaagcagactacc atcacctcatatgcgaagccaatcgatcttacaagtgtttcaagcccctctaagatatct ggaagtgatgaggatgaatttgacgacatcccggacgaagtgcttatgcaactttctgga tctgttgaactcaacaaagcacgcatcgctgctcagaaacgtccggagaagtctgccatt ccgtctaaaagtgctcctcgacccatcaaccccgtcacaaatgtcctttccttccgtgag aaacgagaacgggagaaagaagaaaaaaaacgacgtgatttggctgagctagctcgattg aaaaagaagctcccatctcaaactgccaatcagggctctggtttgcaaggaattaatgtt aacattgatgaacgtgggcctgttgagagcatgatggtctccgactccgattcggatgcg gatagtgaggatagtgatggtgatgatggagacgcccctggacgaaaggccacatctaag ccagatgcagtgaaagcatatgaggaaagcaggagaaagctaataagccaacgtggtcct gttaggaaagttaaacttgtgcggtctgctaaagatatgcgagcgaggctctcaccagac ctatcactactccacaggaccttactgagctgggaattcttcgcgaatggtgaccttcct ccgaattctggccgtacagactatagccttgtttcaaatacgtttgctgatgcggcggat taccaaaaaactttcgaacccctgttgatattagaagcatggcaaagcttccagtcagcg aaagaagaaggtggtttcaaggccttcgaaatcaaggtttcaaatcgcatgtctgtggat gcctttgttgaggttatcaccttcatgcaacctacggaggctaaggatttgggattggcg gaatccgatcttgttctgctatctaagtcgaacaatccgagctctgatgaaaaggcgcca cattgtctcgcaagaattttccggtcaattaaaaagaaagggatgatggaaatttcctac cgcataaatccttcgaacccactcatgtcctcaattttaccaggagcttcactatatgcc gcccgggtcgcgtctttaactcccgttgagcgagaatacggagccttgatggcgctgaag tactacgatctgagcgaggaaatcatcaaagccaagccatcacccatattgaactattcg ctggagtctcttaagcccatcattgatacttacaaagtcaaccctgcacaggcaaaagct gtcaggtcggcaatggataatgacgcgttcacattgattcagggccctccgggttcgggc aaaaccaaaaccattgtcgccttggtgggtgccattttgacccctgtctttgctgagcaa aagatcacccgacccgggtcatcgggcgacttcagaccagtgacacgagctacgacctgc ggaaaacttcttgtttgcgcaccaagcaatgcagctgttgatgagttggttatgaggttc aaggaaggggtcatcacgtcgagtggacaaaagcaaaatatctccgttgtccgtctgggt cgaagtgatgcgataaactcgaatgtcatggatgtaactttggatgaacttgtaaatgca aagcttgggcaaaatggtcgcaaaaatggcagtgagaaggacctccaaacttactattcg gaacataagggagcttgcacccagttcaacgaaattcgcgaaagacttgatcagtgtcgt gcaaagggacaacatgttccgtctgagctggagcgggaatttgatctgttgaagcggaag aaagcgcaacttagtcaggccattgataatgccagggatagtaaccaggcagcagcccgt aatgctgaccttgcgagaaaaaaggttcagcaggagatcattaacgggtcgcatgtcata tgtgcaactttgagcggaagcggtcacgaaatgtttcagtcactgagcatcgagtttgaa acggtcgtcatcgatgaggcagcacagtctattgagcttagcgctcttatccctctcaag tacggttgttccaaatgtatccttgttggtgatcctaaacaactaccgccaacggttctc tcaaaagttgcgtcgcgcttccaatatgagcagagcttgttcgtcagaatgcaagccaat caccccaaagatgtccatctcctcgatacccagtaccgaatgcacccagagatcagtcgt ttcccaagcgccgcattttacgatggtcgacttaaagatgggccagatatggctaagttg cgagttcggccgtggcatagtagcgaacttctgggcccttatcgtttttttgacgtgcaa ggactccattcaagcgccccaaaaagccattcattggttaatttagcagaactccgcgta gcgatgaagctctacgaacggttgactattgattatttgacttacgactttaagggcaag atcggaattatcactccgtacaaaggccaacttagggaaatgaaaaatcagtttgcgaac aagtacgggagttcaatttttaccacagtcgagtttaacaccacagacgcatttcaggga cgggagtgtgaagttataattttctcttgtgtgcgagcatctaatcgtgggatcggtttc ttggctgatatccgccggatgaacgttgggctgactcgtgcaaaatcatcactttgggtg cttgggaattcacagtcactcgtccaaggcgaattctggaacgggctgattaccgacgct cagtcgagaaacttgtatacccagggggatatcctgaaactcttgcagaggccgcaaatc agcctagatatggagctgaaagatgtgcagatgattgacgctccgagcgcgaagagctca ccaccatcaagaaatggatctatgactccaggctggcatggaagtagccgtccgtcgtcg gctctatcaacaggtcgtgtttccagtacccatcctgcgtcctccagggacacaccgggc catagtcctacactagtgccttcaactggtcctgaagggccttcaggcggcaaattcggt ttgaacgacttagccatgtgtggattttgcgggagctacgagcacatgacgacaaactgc gataacgcggaagccaaaatggccagccacggcgcctgctggcgatgtggagatgtttca cactctaagcgcgattgtaaagcagaacgctgtctccggtgcggtgcctttggtcactca gcccgccaatgcacatcaacagttgtcctctccaaacaggagaaggataaaatcgcccgc gacgaacatcaccatgcgcaagctcaaaaagcaaatatcgagcgacagcggcaaaaacaa ctcggcgaccacgatccaaaagtgccagttatccaggtgccgtcaaaagtcgcctcgaat gcaccgtcatccgcaggaatacttcatcaaggacagggcttgcaggactcgccaaatgct gatcagggaaattcgggcaaacgaaagcggatggaaacagatcttcctagttcgcgccca aacttgaaagttcgaaaaccaaatgcccagtttaatgctcagtttgcggcgcctctgaat gccccaaagggcccacgggggaagaaattagacccccatatcgttgctcctcctaccagc gacctggtaataccgtctaaatctgaacagggacatcagccgatagcctccaaagatcaa caactttcacgcgctcgttcggggactgaacaggagaagcagacgacaaatgtaagttca ggcaaatttttctctcccatcctctcctcgtga

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