KEGG   Histoplasma mississippiense: HCAG_03437
Entry
HCAG_03437        CDS       T02229                                 
Name
(RefSeq) pre-mRNA splicing factor prp46
  KO
K12862  pleiotropic regulator 1
Organism
aje  Histoplasma mississippiense
Pathway
aje03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:aje00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    HCAG_03437
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:aje03041]
    HCAG_03437
   03400 DNA repair and recombination proteins [BR:aje03400]
    HCAG_03437
Spliceosome [BR:aje03041]
 Complex B
  Other components
   Prp19 complex
    HCAG_03437
 Complex C
   Prp19-CDC5 complex
    HCAG_03437
DNA repair and recombination proteins [BR:aje03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    HCAG_03437
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st WDR55 Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 EIF3I Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_2nd Beta-prop_SCAP Beta-prop_EML Beta-prop_WDR75_1st Beta-prop_TEP1_C WD40_MABP1-WDR62_2nd Beta-prop_SPT8 Beta-prop_DCAF4 WD40_MABP1-WDR62_1st Beta-prop_EIPR1 WD40_RFWD3 NBCH_WD40 Beta-prop_RIG_2nd Beta-prop_IFT122_1st Beta-prop_IFT140_1st Beta-prop_NOL10_N WDR90_beta-prop_4th WDR54 Beta-prop_WDR75_2nd Beta-prop_HPS5 WD40_like Beta-prop_DCAF12 KNTC1_N Beta-prop_IP5PC_F Beta-prop_WDR19_1st
Other DBs
NCBI-GeneID: 5448254
NCBI-ProteinID: XP_001541340
UniProt: A6R1D0
LinkDB
AA seq 458 aa
MEVTPSPPALDQVVRNSAKRTRDLFGSDYLLPSGFTANLGDSIGVSYRRKVEYDDVQTLP
PSLAEKQAKATASRTKRPKARTGAGIAGTGTETSGSSTALVKSSPVAGSQQSNGDNLPTS
LVRRPMVSQQPKPEWHAPWKLMRVISGHLGWVRSLAVEPNNQWFASGAGDRTIKIWDLAT
GSLRLTLTGHISTVRGLAVSPRHPYLFSCGEDKMVKCWDLETNKVIRHYHGHLSGVYTLD
LHPTLDVLVTGGRDAAARVWDMRTRSNVHVLSGHRTTVSDLKCQEADPQVITASLDSTVR
MWDLAAGKTMGVLTHHKKGVRALAVHPKEFTFASASAGSIKQWKCPEGAFMQNFEGHNAI
INNLAVNEDNVLFSGGDNGSMSFWDWKTGHRFQSLDTTAQPGSLDAEAGIMAATFDRTGL
RLLCGEADKTIKIWKPDDEATEETHPLDWKPTLGRQKY
NT seq 1377 nt   +upstreamnt  +downstreamnt
atggaggttactccatcccctccagcgctcgatcaagttgtgcgaaattcggcgaagcga
acccgcgatctcttcggctccgattatcttttaccctcaggattcaccgcaaatctcggc
gactcgattggtgtgtcatatcgacgaaaagtagagtacgatgatgtgcaaacgctcccc
ccttcccttgctgagaagcaggcaaaggcaacagcgagcagaacgaaacgcccgaaggca
aggactggtgctggcattgctggtaccgggacagaaacatctggctcttcaactgccctc
gtgaaatcttcaccggtggctggctcacaacaatccaatggagataatttgcctacgagt
cttgtacggcgtccgatggtatctcaacagccaaaaccagaatggcacgcgccctggaag
cttatgcgagtgatatcgggacacttgggttgggtccgcagtttggcggtggaacctaat
aatcagtggtttgcaagtggtgcaggagatcgaacaattaaaatatgggatttggcaact
ggcagccttcgtttgacccttaccggccacatatctacggtgcgaggtctggcagtgtct
ccacgacatccataccttttctcttgcggtgaggataagatggtcaaatgctgggatctc
gaaacaaacaaggtcatccgacattaccacggccatctaagcggtgtctacaccctcgat
ttacatcccactctcgacgtcctcgtaacaggaggacgagacgccgccgctagagtgtgg
gacatgcgaacacgcagcaacgtccacgtgctttccggacatagaacaaccgtctcagac
ctgaaatgtcaagaagctgacccacaagtcattaccgcctcccttgattcaaccgttcgg
atgtgggacctggccgcaggcaaaaccatgggcgtcctaacccaccataaaaaaggggtt
cgagcgttggctgtccatccgaaggaattcactttcgccagtgccagcgccggaagcatt
aaacagtggaaatgtcccgaaggcgccttcatgcagaatttcgagggccataatgccatc
atcaataatcttgcggtcaatgaggataatgtattgttctctggtggcgacaatggctcc
atgtccttctgggactggaagactggccatcgattccagtctctggatacaactgctcaa
cccggttcattggatgcggaggctggtattatggctgctacgtttgatcggaccggcctc
cgattgctctgtggagaggctgataaaactattaagatctggaagccggacgacgaggcg
acagaagagacgcatccgttggattggaagccgacattagggagacagaaatattaa

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