Histoplasma mississippiense: HCAG_03830
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Entry
HCAG_03830 CDS
T02229
Name
(RefSeq) similar to replication factor C protein
KO
K10754
replication factor C subunit 1
Organism
aje
Histoplasma mississippiense
Pathway
aje03030
DNA replication
aje03410
Base excision repair
aje03420
Nucleotide excision repair
aje03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
aje00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HCAG_03830
03410 Base excision repair
HCAG_03830
03420 Nucleotide excision repair
HCAG_03830
03430 Mismatch repair
HCAG_03830
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aje03032
]
HCAG_03830
03400 DNA repair and recombination proteins [BR:
aje03400
]
HCAG_03830
DNA replication proteins [BR:
aje03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
HCAG_03830
DNA repair and recombination proteins [BR:
aje03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
HCAG_03830
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFC1
AAA_lid_RFC1
BRCT
AAA
Rad17
AAA_22
AAA_16
AAA_33
nSTAND3
RuvB_N
RCF1-5-like_lid
AAA_28
AAA_14
AAA_5
AAA_18
Gp44_lid
NACHT
AAA_11
Motif
Other DBs
NCBI-GeneID:
5448238
NCBI-ProteinID:
XP_001541732
LinkDB
All DBs
AA seq
1066 aa
AA seq
DB search
MPADIRNFFGGGRQLNSSRKASGPAKKQEDVSSSRKRLEDSDEDEDIEQAPPPKPQPQKK
QKPEESKGEPTTTSAYFASSKKNKAQFKENESRETRDSRDVTLENKSNSKPKVERNDQIE
IPVRSPASMRKTNPKRESIKTARIVETEEDLGADDIFATGYRNPGRGGDDDYVEGDSNSD
FEDMEVEPPKAASPKSKPTKTSPRIKRDSGTKDLGPTDMKSPARTGRKRKSEALRVGEES
DDYVDTKKKPSRSQAQKSPSKPAVKKTKATKTDRPENKGIQDIFDSIPTVRPPSPPAADG
AKKFNFAQRSRDPVTSGSKDLPVGAENCLAGLSFVFTGVLDTLGREEGQSLVKRYGGKVT
SAPSSKTNYVVLGSDAGPKKLETIRKFGLKSINEDGLFELIRRLPANGGDGKAAEKHAAK
KKVEDQRIKDMAAEIDREEKKNAASSIASTTKSLNGAGNPAPAQVDDRLWTSKYAPTSLS
MICGNKGAVEKLQTWLRNWRNSSMADFKKGGKDGTGIYRAVMIHGPPGIGKTTAAHLVAK
LENYDVVESNASDTRSKSLVETGLRGVLDTTSLQGYFSGEGKKVESGKKNLVLIMDEVDG
MSAGDRGGVGALAAVAKKTRIPMILICNERRLPKMRPFDSVTFDLPFRRPTVEQIRARLS
TICYREGLKIPPQVLDNLIQGTHADIRQVINMLSTAKLDQPTLDYDQGKQMSKAWEKHII
LKPWDIVGKILSAQMFSKSSETTLNEKIELYFNDHEFSYLMLQENYLNTRPSAANSYQGR
EQKFKLLELADNAAQSISDGDLVDRMIHGSQQQWSLMPTHAVFSFVRPASFMAGNMTDRP
AFTSWLGNNSKQGKMARQIKEIQGHMRLRSSGDRHEIRQQYLPALWNKLVLPLQVQGKDS
VEGVIDLMDSYFLTREDWDSIVELGLSSMDQKKLKIDSQTKATFTRLYNQQSHPLPFMKA
TSVVAPKHVAKVKPDLEDAIDESDEGEEILGEEETKDDESDMDLKKDKYVKLPKKAPSRK
AKAAAKPQTKKTKKNVADDDDDEDDSEEDVKPKKGPRNARKSKAKT
NT seq
3201 nt
NT seq
+upstream
nt +downstream
nt
atgcccgcagacattaggaacttttttggcggcggaaggcagctaaacagctccaggaag
gcaagcggtcctgccaaaaagcaagaggatgtatcctcctcgagaaaacggctggaagat
agcgatgaagatgaagatattgaacaggctcctccaccaaaacctcagccacaaaaaaaa
cagaagcccgaagagtcgaaaggagagcctacgacgacatctgcttattttgcatcatcc
aaaaagaacaaagctcaatttaaagagaacgaatctcgcgaaacacgagactcgagggat
gttactctagaaaacaaatcgaattctaaaccaaaagtggaaaggaatgaccaaatagaa
attccggttcgcagcccagcttcaatgcggaagaccaacccaaagcgtgaatcaattaaa
accgcccgaatcgtggagaccgaggaggatcttggggcagatgacatttttgctactggc
tatcgaaatccagggaggggtggcgacgacgactatgtggagggggatagcaacagcgat
ttcgaggacatggaagtggaaccaccaaaggctgcatctcccaaatcgaagccaaccaaa
acttccccacgtatcaaacgtgatagcggaacaaaggacctcggcccaaccgacatgaaa
tctcctgctcgaactggacggaagcgtaaatcagaagcattacgcgtgggtgaagaaagt
gatgactacgtcgatacgaagaaaaagccatcccgttcccaagctcaaaaaagcccttcc
aagcctgcagtgaagaaaacaaaagctacgaaaacagacaggccggaaaacaagggaatc
caggatatctttgacagcattccgacagtgcgcccaccgtctcctccagctgcagatggc
gctaaaaaattcaattttgcacaacgatccagagaccctgttacatctggctccaaagat
ctacccgttggcgctgaaaattgccttgctggcctgtcgtttgtcttcacgggcgttctt
gatacattaggtcgagaagaaggccagtcattggtgaagcgatatggtggaaaagtcact
tcggctcccagctctaaaaccaattatgtcgttttgggtagtgacgcagggcctaaaaag
ttggaaactattcggaagttcggtctcaaatccataaacgaggatggcctattcgaattg
atccgaaggcttcccgctaatggaggggatgggaaagccgctgaaaaacacgcagcgaag
aagaaagtggaggatcaaagaatcaaagacatggcggcggaaatagatcgtgaagaaaag
aaaaacgctgcgtcctctatagcatcaaccaccaagtccctgaacggtgcaggtaatcca
gcgcctgcccaggttgacgatcgactctggacctcaaagtacgcacctacctcacttagc
atgatatgcggaaataagggtgctgtggaaaaacttcaaacttggcttcgaaactggaga
aacagctcaatggcggactttaaaaagggagggaaagatggtacaggtatttatcgtgcg
gtcatgatccatgggccgcccggtatcggcaaaacaacagctgcacatctcgtggccaaa
ctcgagaactatgatgttgtcgaaagcaatgcaagtgatactcgaagcaaaagccttgtg
gaaaccggccttcgaggggtgctggataccacttctctccaaggttacttctctggagaa
ggaaagaaagtcgagagtggcaaaaagaatttggttcttatcatggatgaagtagatggg
atgtcggctggagaccgtggtggtgttggggccctagctgccgtggctaagaagacgcga
ataccgatgatactaatttgcaatgaacgaagacttccgaaaatgagacctttcgattcc
gtcacatttgacctgccattcaggcgcccgacggtagaacagatccgtgcgcggttatcc
actatctgttaccgagaaggactgaaaataccgccacaggttcttgacaatctaatccaa
ggcacccacgctgatattagacaagtaattaatatgttgtctactgcgaaactcgaccaa
ccaacccttgattacgaccaaggcaagcaaatgtctaaggcctgggaaaagcatattatc
ctgaaaccctgggatattgttggcaaaatcctgagtgcccaaatgttctctaaaagctcc
gagacaactctgaatgaaaaaatcgaactttattttaacgatcacgaattcagttaccta
atgttacaggaaaattaccttaatacaagaccatcagcagcgaactcgtaccaaggcaga
gagcagaagttcaagttgttggagttggctgacaatgcggcccaaagcatcagtgatggt
gatttagtggatcgcatgatacatggaagtcaacaacaatggagtttgatgcccacacat
gcggtatttagctttgtccgacctgctagcttcatggctggcaacatgacagaccgccca
gcattcacaagctggcttggtaataatagcaaacaaggtaaaatggcgcgccagataaaa
gaaatacagggccatatgcgtctacgttcttctggtgacagacacgaaatccgccagcaa
tacctcccagcgctatggaacaaactggtattaccattacaagtccaaggcaaagattcg
gttgaaggcgttatagacttgatggacagctacttcctcacacgagaggactgggattcc
atcgtcgaacttggtctcagctcgatggatcaaaagaaattaaaaattgactcgcaaaca
aaagccactttcacacgcctgtataatcaacagtcccatcccctcccgtttatgaaagcc
acaagtgttgttgcgccgaagcacgttgccaaggtgaaacctgacctcgaagatgcgatt
gatgagtctgacgaaggtgaggagattttgggtgaagaagaaactaaagacgacgagagt
gatatggatttgaaaaaggataaatatgtgaaattaccgaagaaagccccgtcgaggaaa
gccaaggctgccgcaaagccacaaacgaagaagaccaaaaagaatgttgctgacgatgat
gacgatgaggacgatagcgaagaggatgttaaaccaaagaaggggccacggaatgctcgc
aaatccaaggcaaaaacatag
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integrated database retrieval system
