Histoplasma mississippiense: HCAG_04071
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Entry
HCAG_04071 CDS
T02229
Name
(RefSeq) similar to U6 snRNA-associated Sm-like protein LSm6
KO
K12625
U6 snRNA-associated Sm-like protein LSm6
Organism
aje
Histoplasma mississippiense
Pathway
aje03018
RNA degradation
aje03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aje00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
HCAG_04071
09123 Folding, sorting and degradation
03018 RNA degradation
HCAG_04071
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aje03019
]
HCAG_04071
03041 Spliceosome [BR:
aje03041
]
HCAG_04071
Messenger RNA biogenesis [BR:
aje03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
HCAG_04071
mRNA degradation factors
5'-3' decay
Lsm complex
HCAG_04071
Spliceosome [BR:
aje03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
HCAG_04071
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
SM-ATX
Hfq
Motif
Other DBs
NCBI-GeneID:
5447261
NCBI-ProteinID:
XP_001540231
UniProt:
A6R363
LinkDB
All DBs
AA seq
80 aa
AA seq
DB search
MENGSASEGKDPSAFLSEITGAPVTVKLNSGVVYKGELQSVDGYMNIALEKTEEYVDGKL
RRSYGDAFVRGNNVLYISAD
NT seq
243 nt
NT seq
+upstream
nt +downstream
nt
atggaaaacggctctgcctctgagggcaaagatccctccgcattcctcagcgaaatcact
ggtgcccccgtcacggtcaagctgaattcgggcgtggtctacaaaggagagctacagtct
gtcgatggctatatgaatatcgcgctggagaagactgaggaatacgttgatggaaaactg
agacggagttatggcgatgcttttgtgagggggaataatgtcctctatatctcagctgat
taa
DBGET
integrated database retrieval system
