Histoplasma mississippiense: HCAG_04202
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Entry
HCAG_04202 CDS
T02229
Name
(RefSeq) hypothetical protein
KO
K14555
U3 small nucleolar RNA-associated protein 13
Organism
aje
Histoplasma mississippiense
Pathway
aje03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
aje00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
HCAG_04202
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
aje03009
]
HCAG_04202
Ribosome biogenesis [BR:
aje03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
HCAG_04202
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR3_1st
Beta-prop_WDR5
WD40
Beta-prop_THOC3
WD40_Prp19
Utp13
WD40_CDC20-Fz
Beta-prop_WDR3_2nd
WD40_WDHD1_1st
EIF3I
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_EML_2
WDR55
WD40_Gbeta
Beta-prop_CAF1B_HIR1
Beta-prop_WDR41
Beta-prop_SCAP
Beta-prop_WDR36-Utp21_1st
Beta-prop_EML
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
WDR90_beta-prop_4th
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR36-Utp21_2nd
ANAPC4_WD40
Beta-prop_Aladin
NBCH_WD40
Beta-prop_ACSF4
Beta-prop_Vps41
Beta-prop_SPT8
Beta-prop_DCAF4
Beta-prop_Nup120_160
WD40_RFWD3
Beta-prop_EIPR1
WD40_MABP1-WDR62_1st
Beta-prop_IFT140_1st
Beta-prop_RIG_1st
Ge1_WD40
Beta-prop_WDR19_1st
Beta-prop_IFT140_2nd
Motif
Other DBs
NCBI-GeneID:
5446681
NCBI-ProteinID:
XP_001540362
LinkDB
All DBs
AA seq
957 aa
AA seq
DB search
MSKINIKTTFEVANTIRPIYTGGSISLDASGRHLVTCVGEDVVITDLRAGGQLATIEGDG
AVVTSISITPSASHLAICSRSLSMRIYSLTQLEEPSPSIQVELLRTLKPHTSPVVTSAID
ATGTLLATGSSDGSIKIWDIRRGFATHTFHGHGGVISALSFFEAAGSNAADGPSRNKKST
GSKSSYASDRHRNGDRGPSAAGFRLASGSEDGKILIWDLHKRSSIASLESHVSVVRSLSF
SPSENALLSASRDKTLIMWDARTWKTRRIIPALESVEAAGFLSDESLCYTGGENGRLRIW
DPNRGSEVIRDQDPGHEQEAIIACEYSVNLPWIMTIHADQTLRLNSIEPLLSLKPGMKIE
PLPIIRRISGNDDEVIDLACVGRDRSLVALATNTEYIRIVSTNKEHATDSQSREEQNYFG
AEVTHLEGHDDIIICLDVDWSGCWLATGAKDNTARLWRIDAESSSFTCFATLTGHAESLG
AIAFPRSQPPPSSPAYKDPLNHPPPFLFTGSQDRTLKRWDTSKISASNGHNPSAPKALYT
RKAHDKDINALDVNHSSTLFASASQDRTAKIWSVEDGSVLGILRGHKRGVWSIRFGPKDT
PVITSDSGTSTSRGVVATGSADKTIKLWSLSDYSCLLTFEGHTNSVLKLLWLPPPLIDGE
NEDISARGAIQMHPLVASAGADGLVKIWSPYSGEIETTLDNHEDRVWALATPSTSSIDKS
TDGNLGFALISGGADSVVTFWKDTTSATLSAAVNASTERIEQDQQLQNYIHAGAYREAIT
LALQLNHPARLLSLLTAALNGSQTTSCAEREKESLTGNPDIDIVLQSLDKDNLYSLLLRV
RDWNTNARTAPIAQRILYALSRSYPPSIFIDLASHRRAVPRDQAGGRNKYKPQSMKEILD
TLVAYTERHYKRIEELVDESYLVEWVLGEMDGGIGGGGLLNGEAEMGRGQDVIMAGV
NT seq
2874 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaaatcaatattaaaacgaccttcgaagtagcaaataccattcgtcccatttat
acaggtggaagtatttcgctcgacgcaagcggccggcatttggtgacatgtgtcggcgaa
gatgtcgtgattacagatctaagggccggtgggcaattggcgacgattgagggggatgga
gctgtggttacaagcatatcaataaccccgtcagcatctcacctagcaatatgctcgcga
tcgttgtcgatgcggatttactcgctgacgcaattggaggaaccctctccttcaatacaa
gtggagctcctcagaacccttaaaccccatacatctcctgtagtaacttcagccattgat
gcgacgggaacccttttggctacaggaagctcagatgggtcgataaaaatatgggatata
cgacggggatttgctacacatactttccatggccatggaggggtaatatctgccctatcc
tttttcgaagcagcaggatccaatgctgccgatggaccttccagaaataagaagagtaca
ggatcgaaatcctcatatgccagcgatcgccacagaaatggagatcgtggcccctccgct
gcgggattccgccttgcctctggtagtgaagatggcaaaattctaatatgggatcttcac
aagaggagcagcatcgcatctctcgagtctcacgtttctgttgtgcgcagcctgtccttt
tcgccttctgagaatgcgcttttatccgcaagccgcgataaaaccttgattatgtgggat
gctagaacttggaaaacccgaaggattattccggctcttgagagtgttgaagcagcaggt
tttttgtcggatgaatcgctctgctacactggcggagaaaatggccgtttgagaatatgg
gatccaaacaggggcagtgaagtcataagagaccaagatcccggccatgaacaagaagct
ataattgcatgcgaatactctgtaaatttgccctggatcatgacgatccatgcggatcaa
actttgagactgaattccatcgagccccttctgtcgttaaagcccggcatgaaaatcgag
cccctacctataatacgccgaatttctggaaacgatgacgaagttatcgacttggcttgc
gttggccgcgatcgatccttggtggcgttggcaaccaacactgaatatattagaatcgta
tccacaaacaaggagcatgctacggattctcagtccagggaagagcaaaattattttggt
gcggaagtcactcacctagaagggcatgatgatattattatctgcctggatgtcgactgg
tcaggttgttggctggcgacgggtgctaaagataatacggcacggttatggcgtatcgat
gccgaatcatcatctttcacctgctttgcgactcttactggccatgcagagtcattgggt
gctattgcatttccacggtcccaacctccacccagctctcccgcttacaaagatccactg
aaccatccaccccctttccttttcactggatctcaagaccgcactctcaaacgatgggat
acgtctaaaatatcagcgtccaacggtcacaaccccagtgcaccgaaggcgttatacacg
cggaaagcacacgacaaagatatcaatgcgcttgatgtcaatcattcttctacccttttt
gcctctgcttcccaagatcgcactgcgaaaatatggtccgtagaagacggctccgttcta
ggaatcctacgtggccacaagcgaggcgtctggtctatccgcttcggtcccaaagatact
ccagtcataacttcagattcaggaactagtactagtcgaggtgtcgtcgcaaccggctcg
gccgacaagactatcaagctctggagtctttcagattacagctgcctcctgacttttgaa
ggacataccaacagtgttctgaagctgctctggctacccccgccactaattgatggtgaa
aacgaagacatatccgcacgtggtgccatacagatgcatcctttagtcgcatcagccggc
gctgatggcctagtcaagatttggtccccgtacagcggagaaatagaaacaactcttgat
aaccacgaggatcgcgtctgggcattagcaacaccgtctacatcctcgattgataaatcg
accgatggtaatctcggcttcgctttaatatctggcggagccgactcagtcgtcaccttc
tggaaggacaccacttccgccacactgtcggcagcggtaaatgccagtaccgagcggatt
gagcaggaccagcaacttcagaactacatacatgctggagcttaccgagaggccattact
ctcgcactacaattaaaccaccccgctcgactcctatccctgctcaccgccgctctgaat
ggatcacaaactacaagttgcgcagaacgagaaaaggagagccttactgggaatccagac
atcgatatcgttctccaatccctcgacaaagataatctctactctctcctcctgcgtgtt
cgagactggaacaccaatgctagaactgcgcccatagcgcagcgcattctttacgcgctg
tcaagatcctacccaccctcgatattcatcgacttagccagccatcgccgtgcggtgcca
agggaccaagctggtggtcggaataaatataagccgcagtccatgaaagagattctagat
acgctagtggcgtatacggaacggcattataagaggattgaggagcttgtagatgaaagc
tatcttgtagaatgggttcttggcgagatggatgggggaattggcggcggcgggttgtta
aatggagaggcagagatgggacgaggtcaagatgtcattatggctggcgtttga
DBGET
integrated database retrieval system