Histoplasma mississippiense: HCAG_04441
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Entry
HCAG_04441 CDS
T02229
Name
(RefSeq) DNA-directed RNA polymerase II 138 kDa polypeptide
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
aje
Histoplasma mississippiense
Pathway
aje03020
RNA polymerase
aje03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
aje00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
HCAG_04441
09124 Replication and repair
03420 Nucleotide excision repair
HCAG_04441
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aje03021
]
HCAG_04441
03400 DNA repair and recombination proteins [BR:
aje03400
]
HCAG_04441
Enzymes [BR:
aje01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
HCAG_04441
Transcription machinery [BR:
aje03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
HCAG_04441
DNA repair and recombination proteins [BR:
aje03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
HCAG_04441
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
CTNNBL
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_5
RNA_pol_Rpb2_3
MRNIP
Mo25
GLTP
Motif
Other DBs
NCBI-GeneID:
5446708
NCBI-ProteinID:
XP_001540601
UniProt:
A6R483
LinkDB
All DBs
AA seq
1743 aa
AA seq
DB search
MANIDDLFKKPLLPSKRKSEPLRDASMYPSIVFSPQFYEHSNRAESQTIENDFLSGTLYK
SAKVDANGDVSSNRATAVEDGFDEQDEAGPELPPDFNPDEDIPDDEEGRFFGGGISRDTA
GAMDFVEKLDQGDPGNFALSLRMNPKTIDAIEILGELTDEDVEAEQEEWDFLVTAMVDGD
VIALLSQNLARLDEDNDADRAGVYHVMSVLENLASQLPIAEKIGQDTDMIAWLKNRIQKK
EKPVSQNKQFAAEILAILQDHRSIEHLLGIFSSLLRLLPGDSSSRIRTLAKFMEKDYEKI
KKLIKLRREYASKVSTVDQIIDQERKPMSSDEQELMASEWLSRRLDAGLFCLQNIDVILA
WLVAEDDGAKAKIKSLLLEQDEDLGVIKATLQVIYRKRGSDLEVRGRELVNFINFTVRSL
CSFSLLSYTLVLRVNHYPGIATAISNLRTNGIKLFPPSESFKLPTPTPHVLRFSASNHPT
EISSSMEDYEEEYGEDAYYDQDEGITSEDCWTVISSFFESKGLVSQQLDSFDEFISTTMQ
ELVEEQGQVTLDQTLAPAEDKIDPVVLRRYELKFGTVMLARPSMTEGDGATSIMLPQEAR
LRNLTYASPLYLGITKRVTEGRERLIAERDDAEQGEEDNDEERRSRGTYLHWEPKALNED
EPEEENVFIGRMPIMLKSKYCILKDLNEQSLYNWNECPYDSGGYFIINGSEKVLIAQERS
AGNIVQVFKKAPPSPTPYVAEIRSAVEKGSRILSQLSIKLFGKGDTSKSGFGPTIRSTLP
YIKTDIPIVVVFRALGVVSDEDILNHICYDRNDTPMLEMLKPCIEEGFVIQDREVALDFI
SKRGSSPTSMNHEKRVRYARDIIQKEFLPHISQSEGSETRKAFFLGYMVHRLLQCALGRR
DVDDRDHFGKKRLDLAGPLLANLFRILFMRVTKDLYKYVQRCVETNRQLYLNIGVKASTL
SGGLKYALATGNWGEQKKAASSKAGVSQVLNRYTYASTLSHLRRTNTPIGRDGKIAKPRQ
LHNTHWGLVCPAETPEGQACGLVKNLALMCCITVGTPSEPIIDFMIQRNMEVLEEFEPQV
SPNATKVFVNGVWVGVHRDPSHLVSTVQSLRRRNMISHEVSLVRDIRDREFKIFTDAGRV
CRPLFVVENDPKSENCGSLVLSKEHIHKLEADKELPPDLDPEERRERYFGWDGLVKSGVV
EYVDAEEEETIMIVMTPEDLETSKQLQAGFSLPEEDNNDPNRRVRSTLSQKTHTWTHCEI
HPSMILGICASIIPFPDHNQSPRNTYQSAMGKQAMGVFLTNFDQRMETMANILYYPQKPL
ATTRSMEFLKFRELPAGQNAIVAIACYSGYNQEDSVIMNQSSIDRGLFRSLFYRTYTDSE
KMVGMTVVERFEKPMRSDTLRMKHGTYDKVDDDGIVAPGVRVSGEDIIIGKTAPLAPEAE
ELGQRTKQHTKLDVSTPLRSTESGIVDQVLVSTSNDDLKFVKVRMRTTKIPQIGDKFASR
HGQKGTIGITYRQEDMPFTREGIVPDLIINPHAIPSRMTIAHLIECQLSKVSSLRGFEGD
ATPFTDVTVDSISSLLREHGYQSRGFEVMYNGYTGRKLVAQVFLGPTYYQRLRHMVDDKI
HARARGPTQILTRQPVEGRARDGGLRFGEMERDCMIAHGASAFLKERLFDVSDPFRVHIC
DICGLMTPIAKLKKGDFECRACKNKNKISQVHIPYAAKLLFQELMSMNIAARMFTKRSGV
SLR
NT seq
5232 nt
NT seq
+upstream
nt +downstream
nt
atggccaacatagatgatctattcaagaaaccattattgccgtctaaacgcaaatctgaa
ccgttacgagatgccagtatgtacccctcgatcgtcttttcgccccaattttatgaacat
tcgaatagggctgagtctcaaaccattgaaaatgattttctctcaggcacactttataaa
agcgcgaaggtggatgccaacggagatgtgagcagtaatcgggcgactgccgtggaggac
ggttttgacgagcaagatgaagctggtcctgaactcccaccagacttcaacccagacgag
gatatcccggatgacgaggaagggcgatttttcggtggtggcatatcgcgggacacggct
ggtgcaatggacttcgttgaaaaactagaccaaggagatcctgggaacttcgcgctaagt
ttgagaatgaaccccaaaactattgacgcgatcgagattcttggggaattgactgatgaa
gacgttgaagctgagcaggaagagtgggattttttggtcactgctatggtggacggggat
gttattgccctcctgagtcaaaatcttgcgcgacttgatgaggacaacgatgcggacaga
gccggagtttatcatgtcatgagcgttcttgagaacctcgcatcccaattgcccattgcc
gagaaaatcggacaagataccgacatgatagcctggctgaaaaatcgaatccagaagaag
gaaaaaccagtgagccagaataagcagttcgcggccgagattctagcaatcttgcaagat
cacagatcaatagagcacctgttgggaatattttcttcgcttctacgactacttcctggg
gactcttctagccggatacggacgcttgcaaaattcatggagaaagactatgagaagatc
aagaagctgattaaactgcgacgggaatatgcgtcgaaagtttcaacagttgatcaaata
attgatcaagaacggaaacctatgagctcggatgagcaagagctcatggcgagtgaatgg
ctctctcgacgcctggatgctgggctcttctgcttgcagaacattgatgtcatcttagca
tggctggtggcagaagatgacggagcgaaggcaaagattaagtctctgctcttggagcaa
gatgaggatttaggcgttatcaaggccacattgcaggttatctatcgtaaacgtggatct
gatctcgaagttcgcggtcgggagctggtgaattttatcaacttcaccgttcgcagtctc
tgttcgttctctctgctaagctatactctagtgctccgcgtcaaccactatcctggaatt
gctactgcgatatccaatttgcgaacaaatggaataaagcttttcccgcccagtgagagc
ttcaaactacccactccaactcctcacgtcctgcgcttctccgcaagcaaccaccctacc
gagatctcgtccagcatggaggattacgaggaagaatatggagaagatgcctactatgat
caagatgaagggattacttcagaagactgctggacggtgatttcatccttcttcgagtcg
aaaggtctggtgtcgcagcagcttgattcttttgatgagtttatctcgacgaccatgcag
gagctagtggaggagcaaggacaggtaactcttgaccaaacactggctcctgctgaagat
aagatagatcctgtcgttctgcgacgctacgagttaaaattcggtactgtcatgcttgcg
cgaccgtctatgactgagggtgatggtgcgaccagcattatgttgccccaggaggcgcga
cttcgaaacctcacatatgctagtcccctctaccttgggattacgaagagagtcacggaa
ggacgagagcgtctcattgccgagcgcgatgatgctgagcaaggcgaagaggataacgat
gaggagagacggagtagaggaacatatttgcactgggaaccgaaggctctgaacgaggat
gagccagaagaagagaacgttttcattgggagaatgccgatcatgttgaagtcgaaatac
tgcatcctcaaggatttaaatgaacaatcgctatacaactggaacgagtgtccttacgat
tccggtggatatttcattataaacggcagtgaaaaggttcttatcgcgcaggagcgaagt
gcaggcaatattgttcaagtttttaagaaagctcctccaagcccaacaccgtacgtcgcg
gaaatccgaagtgctgttgagaaagggtccaggatattgtctcaactgtcaataaagctt
ttcggtaagggtgacacctccaagagcgggtttggcccaacgatccgatctactctccct
tacatcaaaaccgacatcccgatcgttgttgtgttccgagcgcttggtgtggtgtccgac
gaagatatcctcaatcatatttgctatgaccggaatgatacaccaatgctggaaatgctt
aagccatgtatcgaggaagggttcgttatccaggatcgcgaagtagctcttgatttcatt
agtaagcgaggatcttcgcctacgagcatgaaccacgaaaagcgggttagatacgcgagg
gatattatccagaaggaatttcttcctcatatctcacagagtgaaggtagcgagacgcgg
aaagcatttttcttgggatacatggttcatagacttcttcagtgcgctcttggccgtcga
gatgtcgatgatcgtgatcattttggaaagaagagactggacttggccggtccactactc
gccaaccttttcagaattctgttcatgagagtcacgaaggatctttacaaatacgtccaa
agatgcgtggaaactaatcggcaattatatctaaacattggtgtgaaggctagtacccta
tctggtggtcttaagtatgctcttgctacaggtaactggggtgagcagaaaaaggcggcc
agctccaaggctggtgtttcgcaagtgcttaatcgttacacatatgcctctacactttca
catcttcgccgaaccaacacgccaattggtcgtgatggcaaaattgctaagcctcgacaa
cttcataacactcattggggtcttgtctgtccagctgaaacgccggaaggccaagcttgt
ggccttgttaagaatttggctctgatgtgttgcatcactgttggtacaccgagcgagccg
atcattgatttcatgattcaacgcaatatggaagtcctagaggagtttgagcctcaggtg
tcgccgaatgctaccaaggtttttgtcaacggtgtgtgggtgggagtccatagagatcct
tctcaccttgtaagtacagtccaatcgttgagacgacggaacatgatttcgcatgaagtc
agtttggtacgagacattcgagaccgggaattcaagatcttcaccgatgctggacgagtc
tgtcgcccccttttcgtggttgagaatgacccgaagagtgaaaattgcggctcactggta
ctatctaaagagcacatccacaaactcgaagcggacaaagagcttccaccagacttagat
cctgaggagcgcagagagcggtattttggctgggacggtcttgttaaatccggtgtcgtt
gaatatgtggatgcagaggaggaagaaaccatcatgattgtcatgacaccggaggacctt
gaaacgtcgaaacaattacaagcaggctttagtcttcctgaagaagataacaacgaccct
aaccgacgtgtccgatcgacccttagccaaaaaacacatacttggactcactgtgagatt
catcccagtatgattctaggcatctgtgctagcatcattccgttccccgaccacaaccaa
tcccctcgtaatacataccaatctgctatgggtaagcaagccatgggtgtcttccttaca
aatttcgaccaacggatggaaacgatggcaaacattttgtactatccgcaaaagccactt
gctacgacacgatctatggagttcctgaaattccgtgaacttcctgctggacaaaatgct
atcgtggcaattgcttgctattccggatacaaccaggaggactctgttatcatgaaccag
agcagtatcgatcgcggtcttttccggagtctgttctaccgaacgtacaccgactcggag
aagatggttggtatgacggttgttgaaagatttgagaaacccatgagatcggataccctt
cgcatgaaacatgggacttatgataaggttgatgacgacggtattgttgcccccggtgtt
cgtgtgtcaggtgaggatatcattatcgggaaaacagctcccttggcaccggaagcagaa
gaactaggtcagcggacgaagcaacataccaaactcgatgtctctacccctctgcggagt
actgagagcggtatcgtcgaccaggtcttggtctccacgagcaacgatgatctgaaattc
gtcaaggttcggatgagaacgacgaagattcctcaaatcggtgacaaattcgcatctcgg
cacggccaaaaaggaaccattggcattacgtatcggcaggaggatatgccgttcacccgc
gagggcattgttccggacctgattatcaatccccacgcgattccttctcgaatgaccatt
gctcatttgatcgagtgccagctcagtaaagtttcttcgctacgtgggtttgaaggtgat
gcgacgccgtttacagatgtgacggtggattccatatccagcttgctccgtgaacacgga
tatcagtcccgcggcttcgaggtgatgtacaatggctacacaggtcgaaagttggttgcc
caggttttcctaggtccaacttactaccaacgtctacgacacatggtcgatgataagatc
catgcacgcgcacggggcccaacccagattctcacacgccagcccgtcgaaggccgggcg
agagatggtggtcttcgattcggagagatggaacgcgattgtatgattgctcacggtgct
agtgcattcctcaaggaaagattatttgacgtatctgatccattccgtgtccacatctgc
gatatctgtgggctgatgacacccattgcgaaactgaaaaagggcgactttgaatgtcgg
gcttgcaaaaacaagaacaagatctcgcaggtccacattccttacgccgccaagcttctt
ttccaggagctgatgtcgatgaatatcgcggcacggatgtttacgaagaggtctggggtg
tcattacggtag
DBGET
integrated database retrieval system
