KEGG   Histoplasma mississippiense: HCAG_04484
Entry
HCAG_04484        CDS       T02229                                 
Name
(RefSeq) hypothetical protein
  KO
K11600  exosome complex component RRP41
Organism
aje  Histoplasma mississippiense
Pathway
aje03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:aje00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    HCAG_04484
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:aje03019]
    HCAG_04484
Messenger RNA biogenesis [BR:aje03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     HCAG_04484
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Cofactors
     HCAG_04484
SSDB
Motif
Pfam: RNase_PH
Other DBs
NCBI-GeneID: 5447348
NCBI-ProteinID: XP_001540644
LinkDB
AA seq 291 aa
MPLDTSTTYRLTRLRLDGRRWNELRLMQAQISTNPASSGSSYLSMGNTVVICMVHGPAEG
RRSEATGPAREGAVVSVAVNVAGFSGVDRKKKSATGGGGDRQASTDLAFALRDAFQPHLH
THIYPHSTISLHVSVLSSDGSLFAACINACTLALVDAGIPMPGLLCACTVGMSGRASTPA
EPELTRVGGINESLDPLLDMSMPEEQELPFMTVANTNPAPTGDDSMDDQEENQMLSIVQM
GAGVHISYLETMFAVGLDGCKQVREILNGVVKAAGRKVLEGEGEILPGVEQ
NT seq 876 nt   +upstreamnt  +downstreamnt
atgcccctcgacacctcaacaacataccgccttaccaggcttcggcttgacggcaggcgt
tggaatgaactccgcttaatgcaggcccagatctcgacgaaccctgccagctctggatca
tcgtatctctcaatgggcaatacagtggttatctgtatggttcatgggccagcagaaggc
cgacgatccgaagcaacgggccccgctcgtgagggggctgttgtatccgttgccgttaat
gttgcaggtttttccggcgttgacaggaaaaagaagagtgcaactggtggcggaggcgat
agacaagcatctacagatctagccttcgccctccgtgatgcctttcagccacatctccac
acccacatatatccgcatagcacaatatccctccatgtttctgtcctatcgtccgacggc
tccctcttcgcagcatgcataaatgcatgcactctagcactagtggatgccgggatacca
atgccgggccttctttgcgcttgcaccgtcggaatgagtggaagagcatccactccggcc
gaacctgaacttactcgcgtgggcggaattaacgaaagtttggatccgcttcttgacatg
tccatgcctgaagaacaagaacttccattcatgactgtcgcgaatacgaacccagcaccc
acgggcgacgattccatggatgaccaagaggagaaccagatgctgtcgatcgtccagatg
ggggctggcgtacatatttcatatctggaaactatgtttgcagtagggctggacgggtgt
aagcaggtcagggagatactgaatggcgttgtgaaagcagcgggacggaaggtgctagaa
ggggagggtgaaatattgcctggtgtcgaacaatga

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