Histoplasma mississippiense: HCAG_04562
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Entry
HCAG_04562 CDS
T02229
Name
(RefSeq) pre-mRNA processing splicing factor 8
KO
K12856
pre-mRNA-processing factor 8
Organism
aje
Histoplasma mississippiense
Pathway
aje03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aje00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
HCAG_04562
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aje03041
]
HCAG_04562
Spliceosome [BR:
aje03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
HCAG_04562
Complex C
U5 SnRNP specific factors
HCAG_04562
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PROCN
PRP8_domainIV
U6-snRNA_bdg
PRO8NT
U5_2-snRNA_bdg
PROCT
RRM_4
Hom_end_hint
Hom_end
Motif
Other DBs
NCBI-GeneID:
5446814
NCBI-ProteinID:
XP_001540722
UniProt:
A6R4K4
LinkDB
All DBs
AA seq
2739 aa
AA seq
DB search
MSALPPPPPPGWGAAAPPSMPLAPPPPGFRPPADPLVGKFAQKKNEWLRTQRNRFGEKRK
AGFVESQKADLPPEHLRKIVKDIGDVSQKKFSTDKRSYLGALKFMPHAVLKLLENMPMPW
ESAREVKVLYHVNGCLTLVNEIPRVIEPVFHAQWATMWMTMRREKSDRRHFKRMRFPPFD
DEEPPLSWSENIEDVEPLEPIQMELDESEDAPVYEWFYDHRPLLDTPHVNGPSYKEWNLT
LPQMATLYRLSRQLLSDVVDKNYFHMFDLNSFLTAKALNVAIPGGPRFEPLYKDVDPNDE
DFGEFNAIDRIIFRAPIRTEYRVAFPYLYNSLPRSVKLSWYSYPQIVYVQSDPNLPAFYF
DPVINPISSRSVAPKNITVSHEDHIFGAGNDEDEFTLPGNAEPFLADEELYTSETASAIA
LWWAPYPFDTPLWKNVKTLTTKERKKSRFGNAFHLMREILRLTKLIVDAQVQYRLGNIDA
FQLADGILYAFNHVGQLTGMYRYKYKLMHQIRSCKDLKHLIYYRFNSGPVGKGPGCGFWA
PAWRVWLFFLRGIIPLLERWLGNLLSRQFEGRHSKGVAKTVTKQRVESHFDLELRASVMA
DLMDMMPEGIKQNKVNIVLQHLSEAWRCWKSNIPWKVPGLPAPIENIILRYVKSKADWWI
SVAHYNRERIRRGATVDKTVAKKNLGRLTRLWLKAEQERQHNYLKDGPYVSSEEAVAIYT
TTVHWLESRKFSPIPFPSVSYKHDTKILILALERLREAYSVKGRLNQSQREELALIEQAY
DSPGTTLARIKRFLLTQRAFKEVGIDMNDNYSNINPVYDIEPIEKITDAYLDQYLWYQAD
QRHLFPAWIKPSDSEVPPLLTYKWAQGINNLSNVWETADGECNVMIETELSKVYEKIDLT
LLNRLLRLIMDHNLADYITSKNNVQLNYKDMNHTNSYGMIRGLQFSGFVFQYYGLVIDLL
LLGLQRASEIAGPPQSPNDFLQFKDRSTETRHPIRLYTRYIDKIWVFLRFSADESRDLIQ
RFLTEQPDPNFENVIGYRNKKCWPRDSRMRLMRHDVNLGRAVFWDLKNRLPRSITTIEWD
DTFASVYSKDNPNMLFSMCGFEVRILPKIRNQNDEFQVKDSVWSLANNTTKERTAYAFLQ
VTEEDIQKFNNRIRQILMSSGSTTFTKIANKWNTSLIALFTYYREAAVSTVNLLDTIVKC
ETKIQTRVKIGLNSKMPSRFPPAVFYTPKELGGLGMISGSHILIPASDKRWWKQTDTGVT
HYRAGMSHDEETLIPNIFRYIIPWEAEFTDSQRVWMEYSQKRQEANQQNRRLTLEDLEDS
WDRGLPRINTLFQKDRSTLSFDKGFRTRTEFKTYQLMKSNPFWWTSQRHDGKLWNLNAYR
TDVIQALGGVETILEHTLFKATAFPSWEGLFWERACLAKGTQLLRYDGTKVRVEDVREGN
LLLGPDGEPRRAFNIVSGRDRLYRISIDADKEDLVVTPNHILVLHLEKENQKRQSELPAS
AAERYDTVEMTAADFAALDPEERRWYRLFRSPGFELGQQNVPIDPYFLGFWLCDGIRAST
TIYTSPEEAAREFIINHAAELDLQLASKEYMQHPVRRVARQTILEQRLAVQCTAPQETDG
TLLSHILLKAAKSGLAPSTRTMSTSRNRQPLSETSAATSMNILPGFASNSTSVVSPGIHS
HEILSLRSSCSQLVQIAEKSGLREECMINPPSSREDLRLDLFDTHIEADEIHGLDENLTG
QKHRLRTGCRAYGDLTVHEEEQILDNIISRPVGTPDIALLAGLIDSDGWYCQPQNTFCFG
ESERISPTLFWDIVTLARSLGLSVSTEQHTMRSPACTACKPRFVAQISGNVAEVTCLLAR
KKGVKSPVSQAHSFTIKGIHLESEMTEWAGFRVDKDQLYLRHDFLVLHNSGFEESMKFKK
LTNAQRSGLNQIPNRRFTLWWSPTINRANVYVGFQVQLDLTGIFLHGKIPTLKISLIQIF
RAHLWQKIHESVVMDLCQVFDQELEQLGIETVQKETIHPRKSYKMNSSCADILLFATHKW
NVTRPSLLFDTKDVIEPTTTNKFWLDVQLRYGDYDSHDIERYVRAKYLDYTTDSMSIYPS
ATGLMIGIDLAYKPYSAYGQYFPGLKALVQQAMAKIMKANPALYVLRERIRKGLQLYASE
SNQEFLNSQNYSELFSNKIQLFIDDTNVYRVTIHKTFEGNLTTKPINGAIFIFNPRTGQL
FLKIIHTSVWAGQKRLGQLAKWKTAEEVAALIRSLPVEEQPKQLIVTRKGLLDPLEVHLL
DFPNISIRASELQLPFQAAMKVEKLADMILRATEPQMVLFNLYDEWLKTISSYTAFSRLI
LILRALHVNPEKTKILLRPDKTVITQEHHIWPTLSDEDWIKVEVQLRDLILNDYGKKNNV
NTQSLTSSEVRDIILGMEISAPSMQRQQAAEIEKQQEEQKQLTAVTTKTQNVRGEEIVVT
TTSQYEQQAFASKTEWRTRAIATSNLRTRANNIYISSDDIQEEGHYTYIMPKNILKRFIT
IADLRVQVAGYLYGGSPPDNDQVKEIRTIVMIPQVGNTRDIQLPHQLPQHEYLSSLEPLG
VIHTLSGNEPSYMTAMDVTQHARLMNAHSSWDKKTVTMTVSFTPGSVSLSAWALTPQGYK
WGAENKDTSSDQPQGYSTSMGEKCQLLLSDKIRGYFLVPENNVWNYSFMGSSFSSLEKRP
IYVKIDTPLRFYDDQHRPLHFQNFAELEDIWVDRVDNFA
NT seq
8220 nt
NT seq
+upstream
nt +downstream
nt
atgtcagctcttcctcctcctccgcctccgggatggggtgctgcagctcccccgtcgatg
cctctcgctcccccaccacccggattccgacccccagctgatcctttggtcgggaagttt
gcacagaagaaaaacgaatggctcaggacgcaacgaaaccgtttcggggagaagagaaaa
gccggctttgtggaaagccagaaggcggatctgccaccggaacatctccggaagattgtt
aaggatataggagatgtgtctcagaaaaagttcagtaccgacaaaaggagctatttgggg
gcattgaaattcatgcctcatgcggtccttaagttgctggagaatatgccgatgccttgg
gaatcagctcgggaagtcaaagtgctctaccatgtaaatggttgcttgacactggtcaac
gagatcccccgagttatagagcctgtttttcatgcgcaatgggctaccatgtggatgacg
atgcgacgagagaaaagtgaccgccggcatttcaaaagaatgcgctttcctcctttcgat
gacgaagagccaccgttgtcgtggtcggaaaatattgaagatgttgaacctttagaaccc
attcagatggaacttgacgaatcagaagatgctccagtatacgagtggttttacgatcat
cgaccacttcttgataccccccatgtgaatggcccaagctacaaggagtggaatttgact
cttccacaaatggcaacgctatatcgattgagccgccaattgctcagcgacgtggtcgat
aaaaattatttccatatgttcgatctaaacagctttttaacagcaaaagctcttaacgtc
gcgattcctggtggaccacgatttgagccgttatataaagacgtcgacccaaatgatgaa
gatttcggagaattcaatgcgatcgatcgtatcatcttcagagctccaatccgaacggaa
tatcgagtcgctttcccatacctatacaattcgttaccacgaagtgtcaagctgtcttgg
tactcctaccctcagatcgtttatgtccaatcagaccccaatctgcctgcgttttatttt
gacccagtcattaatccgatatcatcccgttctgtcgctcccaagaatataactgtcagc
cacgaagaccatatttttggagctggaaatgacgaggatgaatttacactccctggaaat
gctgagccgttcttggctgatgaagagctgtacaccagtgaaacggcctctgcaattgct
ctttggtgggcgccatacccatttgacacgccgctctggaaaaatgtgaagactctgacc
acaaaggagcgaaagaagtcccgttttggaaatgctttccatctaatgcgggaaatcctt
cgcttaacgaagcttatcgttgatgcccaggtccaatatcgtttgggtaacatcgatgct
ttccaacttgctgacggcatcctctatgcttttaatcatgttggccaactgacgggcatg
tacagatacaagtacaaactaatgcaccagatcagatcatgtaaagatctgaagcatctc
atatactatcgcttcaactctggtccggttggaaaaggtccggggtgcgggttctgggca
cctgcttggagggtttggttattcttcctgagagggattatacctctcctggagcgctgg
ttaggaaatttactttcccgtcagtttgaagggcgccacagcaagggtgtcgcaaaaact
gttacgaaacaacgtgttgaatcccatttcgatcttgagcttcgcgcttcagtcatggca
gatcttatggacatgatgcctgaaggcatcaaacaaaataaggttaacattgttttgcaa
catctctcggaggcctggcgatgctggaaaagtaatatcccctggaaagtcccggggctt
cctgctcctatagagaatattatcttaagatatgtcaaaagtaaggcagattggtggatt
tctgttgctcattacaaccgggagcgtattcggcgcggagcgacggttgataagactgtg
gctaagaaaaacctcggacgactcacgcgactctggctcaaagctgaacaagagcggcaa
cacaactacctgaaagatggcccttacgtctcttctgaagaagccgttgcaatttacact
accacggtccactggctggaatcccgaaaattctcccctattccgtttcctagcgtatct
tacaagcatgatacgaagattttaattttggctctagagcgtttgcgcgaagcttattct
gttaagggccgcttaaatcaaagccaacgggaagaacttgctctcattgaacaagcctat
gattctccgggtacaactctggcgagaattaagagattccttctcacacagcgagctttc
aaggaagttggtattgacatgaacgacaactattcaaacatcaatccagtgtacgatatc
gagcccattgagaaaatcactgatgcgtacttggatcagtatctttggtatcaagcagat
caacgtcacctatttccggcctggatcaaaccgtcagattctgaggttccccctcttctt
acatacaaatgggctcaaggcattaataacctttcaaatgtatgggaaaccgcggatggt
gaatgtaatgtcatgattgagacggagctatctaaggtttatgagaaaattgacctcacc
ttactcaatcgacttctccgtctcatcatggaccataatttggctgattacatcacctcg
aaaaataatgttcaactcaactacaaggacatgaaccacacgaatagttatggtatgatc
cgtggccttcaattctctggtttcgtcttccagtattatggcctcgtaatcgatttgctc
ttgctgggcttgcaacgagcaagcgagattgcaggccctccccagagtccaaatgatttc
ttgcagtttaaagatcggtcaaccgaaactagacatcctattcgtctctacacaagatat
attgacaagatttgggtgttcttgagattctcagccgatgaatcacgagatcttattcaa
aggtttttgaccgaacagccagacccgaatttcgagaacgtaatcggttatagaaataaa
aaatgctggcccagggactctcgaatgcggttgatgagacacgacgttaatttgggtcgt
gcagttttttgggatctgaagaaccgccttccgagatccatcaccaccattgagtgggat
gacacttttgccagtgtgtacagcaaggacaatccaaatatgttattttcgatgtgtggc
ttcgaggtccgcattttaccgaagatccgcaaccaaaatgacgagttccaagtcaaggac
agtgtctggtcgttagcgaataacacgactaaagaacgaactgcatatgcgttcctgcag
gtcacggaagaggatatccagaagtttaacaatcggatcaggcaaattttaatgtcttcc
ggctcgactacgtttacaaaaattgccaataagtggaatacgagtttgatcgctctgttc
acatattatcgagaagcagcggtatccactgttaatctcttggacacaattgttaaatgc
gaaaccaaaatccaaacccgggttaaaattggcctgaactcgaaaatgccgtcccgcttc
ccccccgccgtgttctacacccctaaagaattgggaggcctgggaatgatttctggttct
cacatacttattccggccagcgacaaacgctggtggaagcaaactgatactggagtcacc
cactaccgagcgggtatgtcacacgatgaggaaactttgattcctaacatttttagatac
ataataccctgggaggcggagtttaccgactcgcaacgggtgtggatggagtactctcaa
aaacgacaagaggcgaatcagcaaaatcgtcgattgacacttgaggatttggaagatagc
tgggaccgcggccttccacgtatcaatactctcttccaaaaagaccggagcactctcagt
tttgacaaaggcttccgtacgcgaaccgaattcaaaacctatcaactgatgaagagcaat
ccattctggtggacaagccagaggcatgacggtaaattgtggaacctcaatgcctatcgg
accgatgtgattcaggcccttgggggtgttgaaacgatcttggaacataccttgttcaaa
gctacagcgtttccttcgtgggagggattgttttgggaacgagcctgccttgccaaggga
acacagttgcttcggtacgatggtaccaaggttagagtcgaggatgttagagaaggaaac
cttctccttggtcccgacggcgagcctcggcgcgctttcaacattgtcagtggacgagat
cgtctgtatcgcattagtattgacgctgacaaggaagaccttgttgtaacgccaaaccat
attcttgttcttcatcttgaaaaggaaaaccaaaagcgacagagcgaattgccggcttct
gcggcagagcgctacgatactgtggaaatgacagccgccgattttgctgctctggatcca
gaagaaaggcgttggtaccgactctttagatcccctggcttcgagttgggccagcaaaac
gtacccatagacccatatttccttggtttttggttatgcgatggaattcgcgcgagtacc
acaatctataccagtcccgaagaagcagccagagagtttatcatcaaccatgctgctgaa
ttggatctgcaacttgcttcgaaagaatatatgcaacacccagtccgtcgtgtagcccga
caaaccatcttggagcaacggctcgccgttcaatgcacagcaccacaagaaactgacggg
acacttctcagccatatcttgctgaaagctgcgaaaagtggcctagcccccagcacgcga
accatgtcaaccagccgaaatcgccagcctctttccgaaacctcagcagcaacttccatg
aatattcttcccgggtttgcgtctaattcgacttcagtcgtttcccctggtatccactct
cacgaaattctgtcgttgcgtagctcctgttcgcagctcgtgcagatagcggagaagtct
gggttacgtgaagagtgcatgattaacccgccgtcatcgagagaggatctcaggctcgat
ttatttgacacacatattgaagccgatgaaatccacggcctggatgaaaacttgaccgga
cagaagcaccgcctacgaacgggctgtcgagcatatggagatctcactgtccacgaggaa
gaacaaattcttgataatatcattagccgacctgttggcactcctgatattgctcttctc
gcggggctgatcgatagtgatggctggtactgtcaacctcagaatacgttctgttttggc
gagagtgaacgcatttcgcctactcttttctgggacatcgtcacgttagcacgatcacta
ggtctgagtgtttctacagagcagcatacgatgcgtagcccggcttgcacagcatgtaaa
ccccggtttgttgcccagatatccggaaatgtggcagaagttacctgcctcttggcgcga
aagaaaggtgtcaaaagtcccgtttctcaggctcatagtttcactattaaggggattcat
cttgagtcggagatgacggaatgggcgggcttcagagtcgataaagaccaactctaccta
cgacacgactttcttgtattacataacagtggatttgaagaatctatgaaattcaagaag
ttgaccaacgcgcagagatcaggtttgaatcagattcctaaccgtcgctttactctgtgg
tggtcaccaacaattaatcgtgcaaatgtttatgttggtttccaggtccagcttgacttg
acaggcatattcctacacgggaagatcccaaccttgaagatttcattgatccaaatcttc
cgtgcccacttgtggcaaaagattcacgagtctgtcgtcatggatctctgtcaagtattc
gaccaagaattggagcaattaggtatcgaaactgttcagaaagaaactatccaccccagg
aagtcttataagatgaatagctcatgtgccgatattctactattcgccacccacaagtgg
aatgtcactagaccgtctcttctttttgacaccaaggatgtgattgaacccactacgacg
aataaattctggctagatgtacaactgcgttacggtgactacgattctcatgatatcgag
aggtacgttcgtgccaagtacctcgattacacgacagatagcatgagcatatacccatcc
gcaactggcctaatgattgggatcgacctggcgtataaaccatactcggcctatggtcaa
tacttccctggtttgaaggctctggtgcagcaagccatggcaaagatcatgaaggcaaat
ccggccttgtacgtactaagagaacgtattcggaaaggcctccagctttatgcctcagaa
agcaaccaggaattcttgaattcccaaaattattccgaattgtttagtaacaaaattcag
ctttttattgatgacactaatgtctaccgtgtcacaattcataaaacattcgagggtaat
ttgacgaccaaaccaatcaatggtgcgattttcatattcaatccgcgcaccggacagctg
ttcctgaaaatcatccacactagtgtctgggcgggccaaaagcgtctcggtcaattagcc
aaatggaaaacggcagaagaagttgccgcacttatcagatctctgccggttgaagaacaa
ccgaagcaactgatagtcacaagaaagggtctcctcgatccactcgaggttcatttgcta
gatttccccaatatctccatcagagcgtctgagcttcagctacctttccaagctgcgatg
aaggtcgagaagcttgcggacatgattttgcgcgcgactgaaccgcaaatggttcttttt
aacctctatgatgagtggctgaagacaatatcgtcatacactgcattttcccggcttatt
ctaatacttcgagctctccatgtgaatcctgagaaaacgaaaatccttcttcgtccagat
aagacagtcattacccaagaacaccatatctggcccacactgtcagatgaggattggatc
aaggttgaagtccagctccgtgacttgattctgaatgactacggcaaaaagaataacgtt
aacactcaaagtctgactagcagcgaagttcgtgatattattcttggaatggagattagt
gcgccgtccatgcagcgacagcaggctgcggaaattgaaaaacagcaggaggaacagaag
cagctcacagcggtcacaaccaaaactcaaaacgtccgaggagaagagatcgttgttacg
actacttcccagtatgaacaacaagcatttgcttcaaagaccgagtggaggactcgggct
attgcaacatcaaatctccgaacccgggccaacaacatctatatttcttctgacgatatc
caagaggagggacactacacgtatatcatgccaaagaatatcttaaagcggtttatcaca
atcgcagatcttcgagtgcaggttgctggatatttatatggtgggtcaccgcctgacaat
gatcaagttaaggagatccggacgatcgtgatgatcccacaagttggaaatactcgtgat
atacaattaccacatcaacttccccagcatgaatatctcagttctcttgagccccttgga
gttattcatacgctctctggaaacgaaccatcgtatatgacagcgatggatgttacgcag
catgcgcgcctcatgaatgcgcactcatcctgggacaagaaaactgtgacgatgactgta
tcgttcaccccaggttctgtgtcgttgagcgcgtgggcattgacaccccagggttataaa
tggggggctgaaaataaggacacatcctctgatcaacctcaaggttactcaaccagcatg
ggagaaaaatgtcagctgttgctcagtgacaaaatacgcggttactttttagttccggag
aacaatgtctggaactacagctttatgggcagttctttcagtagtttagaaaagcgaccc
atatatgtgaagattgataccccattacgcttctatgatgaccaacaccgcccattacat
ttccaaaattttgccgagttagaggatatctgggttgacagagttgataactttgcatga
DBGET
integrated database retrieval system
