Histoplasma mississippiense: HCAG_04602
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Entry
HCAG_04602 CDS
T02229
Name
(RefSeq) pre-mRNA splicing factor ATP-dependent RNA helicase prp16
KO
K12815
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX38/PRP16 [EC:
5.6.2.6
]
Organism
aje
Histoplasma mississippiense
Pathway
aje03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aje00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
HCAG_04602
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aje03041
]
HCAG_04602
Enzymes [BR:
aje01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
HCAG_04602
Spliceosome [BR:
aje03041
]
Complex C
Other components
Step II factors
HCAG_04602
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
DEAD
HA2_N
AAA_22
AAA_19
nSTAND3
T2SSE
SRP54
SLFN-g3_helicase
ATPase
Flavi_DEAD
AAA_16
AAA_7
PhoH
Microtub_bd
NACHT
Motif
Other DBs
NCBI-GeneID:
5446684
NCBI-ProteinID:
XP_001540762
UniProt:
A6R4P4
LinkDB
All DBs
AA seq
968 aa
AA seq
DB search
MAREGSPKRRKLDSDRLTPTSSSQPSRHLYAPRSRLQTNRDDKLVSTSRASTPRGIRNGD
STPHQEAFQGPESLVDIEDTLALDRDWYTGDELGHTFGDETHNPFGGADSTWADQQREAA
LSERKNNKRISARAAQKQKDVDAWETNRMLTSGVAQRREYDADFDDDEESTRVHLLVHDL
RPPFLDGRTVFTKQLDPVSAVRDPQSDMAVFSRKGSKVVREKRAQKERQKQAQDATKMAG
TALGNLMGIKEDDGDSAAAIPAEEEGQHKGSKFAEHLKKSEGASAFSKSKSLKEQREYLP
AFAVREELLRVIRDNQVVIVVGQTGSGKTTQLTQFLYEDGYAKLGMIGCTQPRRVAAMSV
AKRVSEEMEVKLGGLVGYAIRFEDCTSNETAIKYMTDGVLLRESLVQPDLDKYSCIIMDE
AHERALNTDVLMGLIKKVLARRRDLKLIVTSATMNAERFSKFYGGAPEFFIPGRTFPVDI
QYSRSPCEDYVDSAVKQVLAIHVSQGPGDILVFMTGQEDIEVTCEIIAERLALLNDPPKI
SILPIYSQMPADLQAKIFDRAPPGVRKVIVATNIAETSLTVDGIMYVVDAGFSKLKVYNP
RMGMDTLQITPISQANASQRAGRAGRTGPGKAYHLFTELAFKNELYIQTIPEIQRTNLSN
TVLLLKSLGVKDLLDFDFMDPPPQDTITTSLFDLWALGAIDNLGDLTPMGRRMSAFPMDP
SLAKLLISASEEYDCSEEMLTIVSMLSVPGVFYRPKERQEESDAAREKFFVPESDHLTLL
HVYTQWKSNGYSDACCGTDWDVIRKCICSGYYHQAARVKGIGEYINLRTSVTIQLHPTSA
LYGLGYLPDYVVYHELILTSKEYMSTVTSVDPRWLADLGGVFYSIKEKGYSARERRVTEH
EFNRRMEIEAQMAADRERAAEQKRKAAEEDTLRRKQDAEGSSAHVGMKPVVKLPVRKPGS
YVPAGALH
NT seq
2907 nt
NT seq
+upstream
nt +downstream
nt
atggcccgagaaggcagccctaagcgccggaagctggactcagaccgcttgactccaact
tcgtccagccagccatccagacacctttacgccccacgaagtcgactacaaactaaccga
gatgacaagcttgtcagcaccagtcgtgcgtccactccccgcggcatacgcaatggagat
tctacccctcaccaggaggcgtttcaaggcccagaatcacttgtcgatatcgaagacacc
ctcgcactagatcgggactggtacacaggtgacgaattaggacataccttcggtgacgag
actcataacccgttcggtggggcggacagcacatgggcggatcaacagcgcgaagcagca
ctgtccgagaggaagaataacaagcgcattagtgcccgcgcagcgcagaagcagaaggat
gtcgacgcctgggagacgaatcgcatgttgacctctggcgtggcacagaggagagaatac
gatgccgactttgacgacgatgaagaatccactcgtgttcatttgctcgtgcatgatttg
cgcccaccgtttctagacggccggacggtttttacaaagcaactggatcctgtctctgct
gtgcgggatccacagagtgatatggcagtgttcagccggaagggaagtaaggttgtgcgc
gagaagagagcgcagaaggaacgacagaagcaggcacaggatgctactaagatggctggg
acggcactagggaatctcatgggcattaaggaggatgatggagatagtgcagcagcgatc
cctgcggaggaggagggccaacataagggtagtaaatttgcggagcatttgaagaagagt
gaaggagccagtgcttttagcaagagcaaatcgcttaaggagcagcgggagtatttgcca
gcttttgcagtcagagaggagcttttaagggttatcagggataaccaggtagtaattgtc
gttgggcaaactggttcaggaaaaaccacccaattgacgcaatttctttacgaggatgga
tatgcaaaacttggaatgattggctgtacgcaaccaagacgtgtcgctgcgatgagtgtc
gcgaagcgcgtcagtgaggagatggaggttaaattgggaggtcttgttggatatgccatt
cgttttgaggattgcaccagcaatgaaacagctatcaaatatatgaccgacggcgtgctg
ttaagagagtctctggttcaacctgaccttgacaaatattcttgtattatcatggatgaa
gcccatgagcgggccttgaatacggacgtcttgatgggtctcattaaaaaagttcttgcc
cgtagacgggacttgaagctcattgtcacttcagccaccatgaacgcagaacgattctcg
aaattctacggcggagctccagagttcttcatccctggacggacatttcctgtagatatt
caatactcgcgatcaccttgtgaagactatgtcgacagtgcagtgaaacaagttttggct
atccatgtttcgcaaggacctggggatattcttgttttcatgaccgggcaagaggatatc
gaggtgacttgtgaaataatagcagagcgattagccctcctaaatgaccccccgaagatt
agcattctgccaatatacagtcagatgccggctgacctgcaagcaaaaattttcgacagg
gccccgcccggagttaggaaggtgattgttgccaccaacattgcggaaactagtttaact
gtcgatggaatcatgtatgtggtcgatgctggattttctaaattaaaggtttataatcca
cgaatgggaatggacaccctccaaatcacacccatctcgcaagcgaacgcgtcgcagcgt
gctggtcgtgctggacgaactggacctggcaaagcttatcacttgttcacagaacttgcg
tttaaaaacgaattatacatccagaccatccctgaaatccagcgaacaaacctgtccaat
acagtgcttttgttgaaatccttaggggtcaaggatctgctcgatttcgactttatggac
ccaccgccacaggacactattactacgtcgctctttgatctctgggcactgggcgccatt
gataatcttggagacttgacaccaatgggtcgccgcatgagtgcttttccaatggaccca
tctctcgcgaagcttctcatcagcgcgtctgaagaatatgactgtagtgaggagatgcta
acgattgtttcaatgctttccgtacctggtgtattctaccggcccaaagagcgccaggaa
gaatcagatgctgcccgagagaaatttttcgtgcctgaatccgaccatctgactctgctc
catgtatacacacagtggaaatcgaacggctactcggatgcatgctgcggaactgactgg
gacgttatacgaaagtgtatatgttctggctactaccaccaggctgccagggtcaaaggg
attggcgagtatattaatctccgcactagcgtaaccatacaacttcaccctacgagcgcg
ctatacggtcttggttaccttcccgactatgtggtataccacgaattgattctaacgagc
aaggagtatatgtctaccgttacatctgtggaccctcggtggcttgcggacctaggtgga
gttttctactcgataaaagaaaaaggttactcggcccgtgagcgccgtgtgacggagcat
gaattcaacaggcggatggaaatcgaggcacagatggctgctgatcgcgaacgtgcagct
gagcaaaaacggaaagctgctgaagaggatacactgcgacggaagcaggatgcggaaggt
agctctgctcatgtagggatgaaacctgtagtaaaactgccagtgaggaagcctggatct
tatgtccctgctggggctttgcattga
DBGET
integrated database retrieval system
