Histoplasma mississippiense: HCAG_05902
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Entry
HCAG_05902 CDS
T02229
Name
(RefSeq) hypothetical protein
KO
K14772
U3 small nucleolar RNA-associated protein 20
Organism
aje
Histoplasma mississippiense
Brite
KEGG Orthology (KO) [BR:
aje00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
aje03009
]
HCAG_05902
Ribosome biogenesis [BR:
aje03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
HCAG_05902
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UTP20_N
UTP20
UTP20_C
Op_neuropeptide
Motif
Other DBs
NCBI-GeneID:
5444747
NCBI-ProteinID:
XP_001538297
UniProt:
A6RAB4
LinkDB
All DBs
AA seq
2307 aa
AA seq
DB search
MATVHSGRQGKPANLLKKGTVTTKTHRFESFSQRVVKLKIDPIHRVRRTSVGDDSDSDSD
TYFRASLERWMELNLSENFTQFSQRVNRLCESLPQILHHEDRIMGLLAEYIAKGDEMSME
PLLSLVAQFSRDLGQRFERHFASAVTLVASVAATHSNIEVIEWSFTCLAWIFKFLSRLLV
PDLRQLLGIMSPYLGKEKQKHFVTRFAAESMSFLVRKAALVYYKNKAPLDRAVTFLFEDL
ASIDGARQISMYQQGLMSMFADAIKGVNGGIHSSGADILRCLISAAVVQDETQSALAGQV
LSGVVTNLVHHTSVNTFGSVLDVICDHVESTKHNGDIAAMKIDIRLVFVSVTARKGSRVK
NWRRAHEALMILLTRVVKSSSTPGYSVQLLLAAVVVAVQTSPMDELLAFMRPIMELISDD
QLRDYFLPFCSFFSTFGAERFQSVVLPYFQRGWKDAIVERLRKPNPSAQDISFLNSYTKL
HNAISLSSEPSILPQLVRCLHGQLTAALAQAPKLGESQIIFARGQGFLAYVHLASVMGLL
DLQLWRLIVSNGPDCANCPVFLEATLAYLSACHKCDQATDVNLEPFATILIHNLSSPSHE
IRLFSLKILQILLSQENDGNNTYIEIAIEIEQSELTLHAARTLSMQVRKLAIAYPTLSSQ
KWLDRIIPNFCFGLLSKRLASLWDDACETIKAICEVRNGETVVAELAMRWLQEPGSLRTD
ASTPGEEPQESHISSDFECFNVSNIEKTSLVNFIDSHNYDSLLAEDFKSTHSTEVKHSTS
PRTQALKVLGSVPQVAEKRSRLFVPLFLTWAAYDDDITTVNESNASGTGGGEYGSPSSWN
LRDRKAMLDIFGKFVNPKVLYKAAEVHEALLGLLGNGDSEVQKSALKAIFTWKSPAIQPY
ETNILNLVDDARFRDELSVFLNVSQEANMIKEDHRADLLPVLLRLLYGKIVARGGSRGGQ
GTQEARRKTILRTISQLSENDFDNFIQISFGPLNNVSVLETDAKHVQPLEQEIIGVRKQY
GLLKMVETMFETLKTKMSPFVERSMNVILYCLFRAALYFLYGNQQIIQRIVDCLAVESAR
EEVKIFVLNEILNSLISRADGEINDPENLPDAATTDLIRCKVLAPHVEHILTHVEFLLRS
QSTRQLTMAAIETLSKLAPFVQSSQETTKLISTVTFLLNEPADRVPPKAKSGLLRVMQYF
LPLYDPRDNVDLSRRIFEVISSLFDYFKDNPNRETLSSLEDDNGDSFFLPLIEHFVFDQE
ENDSAHNLAAEAVTTIGVLSEWLEWSQFRAIFRRYRGYVRSRLGMEKNIIRLLGQLTDGL
SRAMNIIGKEEQPVIEDGNMGSIEEKPAIKTNLSKTLPAETRIYTELKSNFIPFLSEFVH
QKDESEVHLRIPVAVITVKLLRLLPEEDMALFLPSLLLDLANVLKSRSQDARDLTRRTLA
DVALILGPSYFGYILKELRSTLTKGYQLHVLSFTVHSILVATSDHFEPGDLDQNLDALAA
VVMDDIFGTVGQEKDAEEYVSKMQEVKSSKSYDSMELLAKISTIRHLSALINPVQALLRE
KLTAAIIRKVDELLRRIGIGLLRNPGAESRDLLVFCYEVIKESYKTEAPQIETHEQGNRI
RFIVNLLNPRNRMNRGSTSSYIYKLSRFGLDVLRAVLNKHQSLMTAANVAGFLPIIGDAM
LQSYEEVKLSAIRLLSTIIKIPLPELDRNSEVYLMEAIKMIKEAPNTNTEAAQAALKLIA
SILRELKSTKLKDSHLGYLLKRITADIEEPDRQGVTFNFIRAVMSRKFIVPEIYELVDNV
AAMMVTNHTRSARDLARGVFVHFMIEYPQAKSRWTKQLGFLAKNLDYQHKEGRQCVMEAI
HLLLSKTNGDPAQNIVSTFFIPVVMVMSNDDAVECREMAGVLLHDIFSRADSEQLQSMLS
PLRSWLEQSQNPLLTTTGLQAIRIFLESDRKNKDDEVRFVAHRLPRIIGPAVKNREGEGW
EVLYHSLQLFTKVCQLFPGIALSGDCENIWRYVCESLFYPHVWIKSCAANLIGIWLADEA
KGNASIGYGSVPLISASGLKLEGSTMLDITRASLLCLKSATVSEDLATQTIRNLVFLGRC
FSQNNLELSKKVEDLSDDVSNDSDESDNIDPAAAKPMKQNKPAIEFIFERAAAILRQEPR
TTRADSLISKKASMKLLAALCTHLDVAHLIPSLQTILLPLLHLTDPSIHAPRSLDEQFQD
TYKSLVSSSQEILDLLQKRLGTTDFVTQLTVARESVRSRREARRVKRRVEAVTDPEKFGR
EKKRKNDRKREKRKEKGIEYQERRRGW
NT seq
6924 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccgtacattctggacgccagggcaagcctgccaatctcttaaagaaaggcaca
gtgacgacaaaaacccaccgatttgaatctttctcccagcgcgtcgttaaattaaaaatt
gatcctatccatcgtgtgcggcgaaccagcgttggtgatgacagcgactcggactcggac
acgtacttcagggcttccctggagcgctggatggaacttaacctgtcggaaaattttact
cagttctcccaacgagttaatcgactgtgcgaaagcttaccgcagattcttcatcatgag
gatcgaataatgggattgttggccgagtatatcgcaaaaggagatgagatgagcatggaa
cccctgctgagtcttgtagctcagttttcgcgggacttgggccagcgatttgaaagacac
tttgcgtcggccgtcacgttggtggcttccgtcgccgctacacactcaaatatcgaggtg
atagaatggagttttacatgtctggcatggattttcaagttcctatcccgtctccttgtc
ccggacctacgccaactgctgggaataatgtctccgtaccttgggaaggaaaaacaaaaa
cactttgtgacaagatttgctgcggagtctatgtccttcttggtccggaaggccgcactt
gtctactacaaaaacaaggcaccgcttgacagagccgttaccttccttttcgaggacctc
gctagcattgatggggcgcgccaaatttcaatgtatcaacagggccttatgtcaatgttt
gcagatgcgattaagggggttaatggtggtattcattcaagtggagcagatatcttgcgt
tgcctaatcagtgccgctgttgtgcaagacgaaacccagagtgccctcgcagggcaggtt
cttagcggggttgtcactaatttggttcatcatacttctgtaaacacctttggttcagtg
cttgatgtgatctgtgatcatgttgaatccactaaacacaatggcgacattgcagcgatg
aagattgacatccgcttggtttttgttagcgtaaccgcgcgcaagggctctagggttaaa
aactggagaagagcacatgaagctctcatgatccttctcactcgcgtcgttaagtcatct
agtaccccggggtattccgttcaactgctcttagctgctgtggtcgttgcagtgcagacc
tcccccatggatgaattgctggcgtttatgcgccctattatggaattaatcagcgatgat
caactgagggactacttcctcccattttgctcttttttctctacttttggggctgaacgc
tttcagagcgttgtgctcccatactttcagcgtggctggaaggatgcaattgtcgaaagg
ctgcgcaaacccaatccaagtgcccaggatatctcattcctaaattcttatactaagctt
cacaacgctatatccctctcttctgagccttcgattcttccacaattagtccgctgcctc
cacggtcaactaacggctgctttggcacaagctcccaaacttggagaaagccaaattata
tttgctcgaggccaaggttttttggcttatgtccacctcgcttctgtaatgggcttactt
gatttacagctttggagattgatagtttccaacggacccgactgcgcaaattgcccggtt
ttccttgaagctaccttggcttatttgtccgcttgtcacaaatgcgatcaggcaaccgat
gtcaaccttgagccgtttgctacaattctgatccacaatctttctagtccatcacacgaa
attagactgttttcccttaaaattctacaaattttgttgtctcaggagaacgatggcaac
aatacttacatagaaatagcaatcgaaattgaacaaagcgagctaaccctccatgcagcg
aggactctatcaatgcaagtacgcaaacttgccatcgcatacccaacattgtcttcccag
aagtggttggatcggattattccgaatttctgttttggcttgctatcgaaaaggctagca
tctctgtgggatgacgcatgtgaaacaattaaggcaatttgcgaggtgcgaaatggagag
accgttgttgcggagcttgctatgcgctggctgcaagagcctggctcgcttagaaccgat
gccagtacgcctggggaagagccgcaggaatcgcatatctcgtcggacttcgaatgcttt
aacgtttcaaatatcgagaaaacctccttagtaaatttcattgattcccacaactacgat
tctttgcttgcagaagatttcaagtctacacattcgacggaagtaaaacactctacttct
cctcgaacacaggctctcaaggtccttggatctgtgcctcaggtggcagagaagcgatct
cgactatttgttcctctatttctaacatgggcagcttatgatgatgacattactaccgtt
aacgagtccaatgcttcaggtacaggtggaggagaatatggctccccttcttcctggaat
ttgcgcgaccggaaagctatgctcgacatctttggaaaattcgtgaaccccaaggtttta
tacaaggcagcagaggtccatgaagcgttacttggccttcttggcaacggtgattcggaa
gttcagaaatctgcactgaaggctatattcacatggaagtcgccagcaattcaaccatat
gagacgaacatattgaatcttgtggatgatgcaaggttccgagatgaattatctgttttc
ttaaatgttagccaagaggctaatatgattaaggaagatcaccgtgcagatttattgcca
gttttgctaagacttctgtatggcaaaattgttgctcgcgggggctctcgtggtggacaa
gggacccaggaggcacgcagaaaaaccattttaagaacgatatcccagctttctgaaaat
gattttgacaactttattcaaatatcgtttggtcctttgaacaatgttagtgtcctcgaa
accgacgccaagcatgtccaacccctagaacaagagataattggcgtcagaaagcagtat
ggtcttctgaaaatggtggaaactatgttcgaaactttgaagacgaagatgtcacccttt
gttgaacgttccatgaatgtgattctatactgtcttttccgagcagcactctacttcctt
tacggaaaccaacagatcattcaacgaatagttgattgtctggctgtggaatctgcccgt
gaggaagtcaagatattcgttctaaatgagatcctgaacagcctcattagtcgtgcggat
ggagagataaacgatccggagaatttaccagatgcagcaacaacggatctaattcggtgc
aaagtactggcacctcatgtcgagcacatattaactcatgtcgaatttctccttagaagt
caatctacccgtcaacttacgatggctgcaattgagacgctgtctaagctcgcaccgttt
gtccaatcatcacaagagaccacgaagttaattagtacagtaacgtttcttcttaatgaa
cctgcagatcgagtacctcccaaagccaaaagcggacttctacgtgtcatgcaatatttc
ctacccttatatgatccacgcgataacgtggacctcagccggcgaatctttgaagtcatt
tcctctctattcgattacttcaaggataatccgaaccgtgaaacgctctcttccctagag
gatgataatggagactcctttttcctacctctcattgaacattttgtgtttgatcaggag
gaaaatgatagtgcccataacctggcggcggaggcagttacaactatcggggttctgtcc
gaatggctagagtggagccaattcagagcaatattccgcaggtataggggttacgtgcga
agtcgcctcggaatggaaaagaacatcatacgtcttctaggacagctgaccgatggtttg
tctcgagccatgaatattattggcaaagaagaacaacctgttattgaggatggaaatatg
ggaagcattgaggaaaaacctgcaattaagaccaatctctccaagactttgcctgcggaa
actcgcatttacacagaactgaaaagcaacttcatccctttcttatctgaatttgtgcat
cagaaggatgaatctgaagttcatcttcgcattccagtcgcagttataactgtcaagtta
ctgaggcttcttcctgaggaagacatggctcttttcctcccctccctacttctagaccta
gctaatgttctcaaaagtcggtctcaggatgctagagatttgaccagaagaacactcgct
gatgtcgcacttattcttgggccgtcttattttggatatattctaaaagaattgcggagc
acgttgacaaagggataccaacttcacgtgttatcctttacagtacattctattctcgtg
gcgaccagtgatcattttgagccgggcgacttggatcagaatcttgacgccctcgcagcg
gtagtgatggatgatattttcggcaccgttggccaggagaaggacgctgaagagtatgtg
agcaaaatgcaggaggtaaaaagtagcaaaagctatgattccatggaacttctcgcaaaa
atctccacaattcgccatctctcggctcttatcaacccagtgcaagcgcttttgcgagag
aaactcacggccgctatcatcagaaaagtcgatgaactgcttagacgaattggcatcggc
ctgctgcggaaccctggtgctgaaagccgcgatcttctagttttctgttacgaggtgata
aaggagtcatacaaaactgaagcgccgcagattgaaacccatgagcaaggaaacagaatc
cgtttcatcgtcaatttgctcaatccgaggaaccgcatgaatcgaggaagcacatcctca
tatatttacaagctttctcgctttgggcttgatgttctccgcgccgtactaaataagcac
caatcgctcatgactgctgccaacgttgccggattccttcccattattggagacgctatg
ttacagagctacgaagaggtcaaactgtctgccattaggctcctatccacgatcattaaa
atcccactccccgaactcgatagaaactctgaggtatatctaatggaagccattaaaatg
atcaaggaagccccaaacacaaatacagaagctgcgcaagccgccttgaaacttatcgct
tccattctacgcgaactcaagagcacaaagctgaaggactctcaccttggttatttgttg
aagcgaataactgccgatatcgaggaacctgatcgccaaggggttactttcaatttcatt
cgggcagtgatgtctcgtaaatttatcgttcctgagatatatgagcttgttgacaatgtt
gcggcgatgatggtaacaaatcatacaaggagcgctcgcgacctcgcaagaggcgtcttc
gtacactttatgattgaataccctcaagccaagagcagatggacaaaacaacttgggttc
ctcgccaaaaaccttgactatcagcataaagaaggccgtcagtgtgttatggaagcgatt
catcttcttctctcaaagaccaatggcgaccctgctcagaatattgttagcacatttttt
ataccagtggtaatggttatgtctaacgatgacgcagttgaatgtcgggagatggctgga
gttcttctgcatgatatcttcagccgtgctgattcagagcagttacagtctatgctctct
cctctccggtcttggttggaacaatcccaaaacccattgctcacaaccactgggttacaa
gcaatcaggatattcttggaatcagatcggaagaataaggatgatgaagtgcggtttgtt
gcgcaccgattgcctcgaatcattggccctgcagtgaagaatcgcgaaggggagggatgg
gaagtgttatatcattcgctacagctcttcacaaaagtatgccaactctttccaggcatc
gcattgtcgggggattgcgagaatatttggcgctatgtttgcgaaagtcttttctatcca
catgtctggataaagtcatgcgcagcaaatttaattggaatatggcttgcagacgaagcg
aaaggaaatgcctccatcggttatggttccgttccgctcatcagcgcatctggtcttaaa
ctcgaaggcagcacgatgctggacattacgcgagccagcctgctatgtctaaagtcagca
accgtttctgaagatctcgcaacccaaacgatcagaaacctggtgttccttggacgttgc
ttcagccagaataacctcgagctttcaaagaaggtagaagatttgtctgacgatgttagc
aacgatagcgacgaaagcgacaacattgacccagctgcggcgaaacccatgaaacaaaac
aagccagcaatcgaatttatcttcgaacgagcagctgccatccttcggcaagaacctaga
accacccgtgcagattctttgatcagtaaaaaggcttccatgaaacttctcgcagccctt
tgcactcatcttgacgtcgctcatttaattccatctctccagacaattcttcttccgtta
ctacatctaactgacccatccatccatgcgcctcgctccctcgacgagcagttccaggat
acttacaagtcccttgttagcagcagccaggagatcctcgatttgctgcaaaagaggtta
ggcacgactgatttcgtaactcaattgacggttgctcgtgagagtgttaggtccagacgg
gaggccagaagagtcaagaggcgcgtcgaagctgttactgatcctgagaagtttggcaga
gaaaagaagcggaagaatgaccgcaagcgggagaagaggaaggaaaagggcatagaatat
caggagcggagacgtggttggtag
DBGET
integrated database retrieval system