Histoplasma mississippiense: HCAG_05932
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Entry
HCAG_05932 CDS
T02229
Name
(RefSeq) hypothetical protein
KO
K03011
DNA-directed RNA polymerase II subunit RPB3
Organism
aje
Histoplasma mississippiense
Pathway
aje03020
RNA polymerase
aje03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
aje00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
HCAG_05932
09124 Replication and repair
03420 Nucleotide excision repair
HCAG_05932
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aje03021
]
HCAG_05932
03400 DNA repair and recombination proteins [BR:
aje03400
]
HCAG_05932
Transcription machinery [BR:
aje03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
HCAG_05932
DNA repair and recombination proteins [BR:
aje03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
HCAG_05932
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
Motif
Other DBs
NCBI-GeneID:
5444628
NCBI-ProteinID:
XP_001538327
UniProt:
A6RAE4
LinkDB
All DBs
AA seq
576 aa
AA seq
DB search
MDYDEMDIEPQGPQVTVREVNRRKEETKKKIHPNEYKTTNQQAEPHRVDFRLSSVDLAFA
NSLRRTLLAEIPTVAIDVVEIESNTSVLPDEFISHRLGLIPLNSKNCDADMEYSRDCDCE
GGCARCVVTLQLQARCTGEDIMKVYARDLVIVGDRANEWVGNPVIMDAEGKGPVICKLRR
GQEIKMTCIAKKGIAKEHAKWAPTAAVGFEYDPHNNLKHVDYWYEEDPIKEWPISANAEW
ETPAQPDMPFDYDAQPSTFYIDVESIGNLEPDAIVQQGITVLQRKLAEIISALTGAGDTD
RNGATMNGIGEDGGRSPDAYEPPEGMDGGYTAYASNGVGGAAGGGSVWGGAGGATPYGAT
PHFEIRRESGPQALCDKRSEQSDTTKKEKRIRWQTELKGGVGHAAVLGMPDRVCLERWLA
LRKANLLLPEEKEKGGTECQHLKAMRGYTGSNLAPRCGWMDGWMDGRGMKEERECNDGAQ
ASFSPEAISSGKSPALLPPDLYYYAMQSQRRENGAKPTRSASSKGVNRKKKTQNDQEPLL
TGAPTYTLCGAFQVSQENTSPEGPTAWLVGNWCFLF
NT seq
1731 nt
NT seq
+upstream
nt +downstream
nt
atggactatgatgaaatggacattgagccccaggggcctcaagtcacagtcagagaggta
aatagacgaaaggaagagaccaaaaagaagatccatcctaacgaatataaaaccacaaac
caacaggctgaaccacatcgtgttgacttccgcctcagctccgtcgacctcgctttcgcc
aactccctccgccgcaccctcctcgccgaaatccccaccgtcgccatcgacgtcgtcgaa
atcgaatccaatacctccgttctccccgatgaattcatctctcaccgcctcggcctcatc
ccgctcaactccaaaaattgcgacgccgacatggaatactcgcgcgactgcgactgcgag
ggcggctgtgcgcgctgcgtcgtcaccttgcaactgcaagcgcgctgcacgggcgaggat
attatgaaggtgtacgcgcgcgatctggtgatcgtcggggatcgggcgaatgagtgggtg
ggcaacccggttatcatggatgcggaaggaaaaggccctgtgatttgcaagttgcgcagg
ggccaggagattaaaatgacgtgtattgcgaagaaggggattgcgaaggagcatgcgaag
tgggcgccgactgcggcggtggggtttgagtatgatccgcataacaatttaaagcatgtg
gattattggtatgaagaggatccgattaaggaatggcccatctctgcaaacgcagaatgg
gaaaccccagcccaacccgacatgcccttcgactatgacgcgcagccctccaccttctac
atcgatgtcgaaagcatcggcaaccttgaaccagacgccatcgtccaacagggtatcact
gtcctccaacgcaagctcgcagagatcatttctgccctaaccggcgcgggagatacggat
cgcaacggcgctacgatgaacggcatcggtgaggacggtggccgtagtcccgacgcttac
gagccacctgagggaatggatggtggctacacagcttatgcgtctaatggtgttggcggt
gctgctggaggtgggagtgtttggggtggtgcgggcggcgcgacgccgtatggggctaca
ccccatttcgagataagacgagaaagtgggcctcaggctctgtgtgacaagagaagcgaa
cagagtgacaccaccaagaaagaaaaacggatacggtggcaaactgagttgaagggaggt
gtgggacacgcggcggtgttggggatgcctgatcgcgtctgtcttgaacggtggctggct
ctacgaaaggcgaatcttctactaccagaggaaaaggaaaaaggaggaactgaatgccag
catcttaaggcgatgagggggtatacaggttcgaatttggctccacggtgcggatggatg
gatggatggatggatggacgggggatgaaagaggaacgggaatgtaatgacggggcacag
gcttccttttcccccgaagctatatcctctggcaaatcgcccgccctcctgccacccgat
ctatattattatgccatgcaaagtcaacggcgcgaaaacggcgcgaagccgacgcgctcg
gcgtcctcaaaaggggtgaatagaaaaaaaaaaactcaaaacgatcaggagccgttgtta
acaggcgctcccacatacacactttgcggcgcttttcaagtttctcaggaaaacacatcg
cctgaaggaccaactgcttggttggttggtaattggtgtttcctcttttaa
DBGET
integrated database retrieval system
