Histoplasma mississippiense: HCAG_06417
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Entry
HCAG_06417 CDS
T02229
Name
(RefSeq) DNA-directed RNA polymerase II 13.3 kDa polypeptide
KO
K03008
DNA-directed RNA polymerase II subunit RPB11
Organism
aje
Histoplasma mississippiense
Pathway
aje03020
RNA polymerase
aje03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
aje00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
HCAG_06417
09124 Replication and repair
03420 Nucleotide excision repair
HCAG_06417
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aje03021
]
HCAG_06417
03400 DNA repair and recombination proteins [BR:
aje03400
]
HCAG_06417
Transcription machinery [BR:
aje03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
HCAG_06417
DNA repair and recombination proteins [BR:
aje03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
HCAG_06417
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_L_2
RNA_pol_L
CorA
Motif
Other DBs
NCBI-GeneID:
5445395
NCBI-ProteinID:
XP_001538812
LinkDB
All DBs
AA seq
168 aa
AA seq
DB search
MENQQPTKPLDPERERSMTFFDSSAASYRQNPCKTKVRPHLDMVARFESFVLLPGEKKVE
VEVDTRIPSTAIFTFNKEDHTLGNMIRSRLITSSHVLFSGYKVPHPLVPKFILRVQTDGQ
ITPKEAVITACHELVKDLGSLSREFTKEYELRKMVGTGAQQQNAQNGV
NT seq
507 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaccaacaacccactaagccgcttgatcccgaacgggagcgctccatgaccttc
ttcgactcctctgcggcgagctaccgccagaacccttgcaagaccaaagttcgtccgcac
ctggacatggtagctagattcgaatccttcgttcttctcccaggcgagaagaaggtcgag
gttgaggttgatacccgcatcccgtccaccgccattttcaccttcaacaaggaggaccac
acgcttggcaatatgatccgctcgcgtcttattaccagctcacacgtccttttctcgggc
tacaaggtccctcaccctctggtcccaaaattcattctacgggtacaaacagacggtcaa
atcacccccaaggaagccgttatcaccgcatgccacgaactagtgaaggatttgggctcc
ctcagccgcgagtttacgaaggaatacgaattgcggaagatggttgggacgggtgctcag
caacagaacgcgcagaacggtgtttag
DBGET
integrated database retrieval system
