Histoplasma mississippiense: HCAG_06498
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Entry
HCAG_06498 CDS
T02229
Name
(RefSeq) DNA polymerase delta catalytic subunit
KO
K02327
DNA polymerase delta subunit 1 [EC:
2.7.7.7
]
Organism
aje
Histoplasma mississippiense
Pathway
aje03030
DNA replication
aje03410
Base excision repair
aje03420
Nucleotide excision repair
aje03430
Mismatch repair
aje03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aje00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HCAG_06498
03410 Base excision repair
HCAG_06498
03420 Nucleotide excision repair
HCAG_06498
03430 Mismatch repair
HCAG_06498
03440 Homologous recombination
HCAG_06498
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aje03032
]
HCAG_06498
03400 DNA repair and recombination proteins [BR:
aje03400
]
HCAG_06498
Enzymes [BR:
aje01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HCAG_06498
DNA replication proteins [BR:
aje03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
HCAG_06498
DNA repair and recombination proteins [BR:
aje03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
HCAG_06498
MMR (mismatch excision repair)
DNA polymerase delta complex
HCAG_06498
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_B
DNA_pol_B_exo1
zf-C4pol
POL3_N
Motif
Other DBs
NCBI-GeneID:
5445489
NCBI-ProteinID:
XP_001538893
UniProt:
A6R857
LinkDB
All DBs
AA seq
1086 aa
AA seq
DB search
MQLPAREVGDSTTSVNPKQNRVSVNDLVSGYASGNNYESTTTSTMSSTMLKPPQKRVLGD
ATINRHNVMPKSPSTAKKRKLEAEQPTIGIKPSSQTGNRKLISSGPRQSQQKSQFEEEVL
EKLTQDISGLKENNSEKDQQWARPSLDNFDASRDNLCFQQIEAEEGTIGGGKQPAVKLFG
VTEAGHSVLLHVTHFLHYLYVAAPVSFAPTDCEGFKAYLEHEIEIHHPAIHSVQMVMREN
LFGFQGNQKSPYLKITVTDPRHINKLRTLIETGRANYRGMWRADADGILTFDNIEYILRF
MIDTGMSGMSWVEAPASKYQILPMVERMSNCQIEATIHYRDLIAHPNDGEWAKMAPLRIL
SFDIECAGRKGVFPEANQDPVIQIANVVTRYGESKPFIRNVFVLGTCSLIVNTQLLEFDT
EEKMLMAWKNFLVEVDPDVIIGYNIANFDFPYLLKRAEHLKSGLSAAKLHPKFELFNGTP
DSRRRLAVYCLKDAYLPQRLMDKLMCLVNYTEMARVTGVPFNFLLSRGQQVKFISQLFRK
ALEQQLVIPNLRNESTSEQYEGATVIEPIRDFYDVPIATLDFASLYPSIIQAHNLCYTTL
LKKSTIDAHQMKEGEDYIVTPNGDRFCTSKVRKGLLTQILEELLGARKRAKKELAVETDP
FKKAVLNGRQLALKISANSVYGLTGATVGKLPCLPIASSTTSYGRQMIEKTKEEVEAKYT
IANGYSHDAKVVYGDTDSVMVKFGMKDLAEAMKLGQEAADYVSSKFINPIKLEFEKVYFP
YLLINKKRYAGLYWTKPDKYDKMDTKGIETVRRDNCRMVQTVIETVLRKILIDRDVDGAQ
SYVKDTISDLLQNKIDMSKLVITKALSKKDYTAKQAHVELAERMKKRDAGSAPTLGDRVA
YVIVKGAGGSKNYEKSEDPIYVLENNIPIDTKYYLDNQLAKPLTRIFEPILGEKKAGQLL
TGEHTRSISVAAPTLGGLMKFTKKTQTCMGCKKPLTGKEGSDGAVCQDCLPRLGELYTKT
LTKVSDLEVRFGRLWTQCQRCQGSLHCEVICSSRDCPIFYMRMKAKKDVEDAEKELARFD
HDLGAW
NT seq
3261 nt
NT seq
+upstream
nt +downstream
nt
atgcagcttcccgcacgcgaagtgggagattcaaccacctcagtcaatcccaagcaaaac
cgtgtgtctgtgaacgatctcgtttccggatatgcttcaggaaataattacgaatccact
acgacatccacaatgagctcaactatgctaaagcctcctcaaaaacgagttctcggcgat
gctaccatcaaccgtcacaatgtaatgccgaagtcacccagtaccgcaaagaagcggaag
ctcgaagctgaacagcccactatcggaattaagccgtcctcgcagaccggcaacaggaaa
ctcatttcctcaggccctcgtcaatcgcagcagaaaagccagttcgaggaggaagtcttg
gagaagctgacgcaggacatttcaggactgaaggaaaacaactcggagaaagaccagcag
tgggctcggccaagtttggataactttgacgcatcgcgagacaatctttgcttccagcaa
attgaagcggaggaaggtactatagggggcggaaagcaacctgcggttaagcttttcggg
gttactgaggctggccattcggttctcttacatgttacgcatttcctacactatctctat
gtggctgctccagtctcgtttgctccaacggactgtgaaggattcaaggcatatctcgag
cacgaaattgagatccatcacccagctatacattcagtacaaatggtaatgcgagaaaac
ctattcggctttcagggcaaccagaaaagcccctatttgaagatcacagtgacggacccg
cgacatatcaacaaattgcgaacgctgattgaaacaggcagggcgaattatcgaggaatg
tggagagccgatgctgatgggatattgacctttgataatattgaatatattttacggttt
atgattgatacaggaatgtcgggcatgtcatgggtagaagcgccggcttccaaataccaa
atcctcccgatggtcgagcggatgtcaaattgccaaatagaagctacaattcattaccgt
gacctcattgcccatcccaacgatggcgagtgggcaaaaatggcaccactccgaatcctt
tccttcgatattgagtgtgctggtcgcaagggtgtgtttcccgaggccaatcaagacccg
gtaattcaaatcgccaatgtcgttacacgttatggggaatcaaaaccttttatccgaaat
gtgtttgttttgggcacatgtagcttgattgtcaacacccaacttttggaattcgacact
gaagaaaaaatgctgatggcttggaagaacttcctggtggaagttgatccagatgttatc
atcggatacaatattgctaacttcgatttcccctacctccttaagcgcgcagaacatctc
aaatcgggattatcagctgcgaagctacaccctaaattcgaacttttcaatggaaccccg
gattcgaggcgacggttggcagtttactgcttgaaggatgcatacttgccccaacgactt
atggataaactcatgtgccttgtcaattatactgaaatggcgagagttactggcgtgcct
ttcaactttctcctttcccgtggacaacaagtcaagtttatcagtcaactattccgcaag
gctctcgaacaacaactggttattcccaacctacggaacgaatcaactagcgaacagtac
gaaggagcaacagtcattgagcctattagagatttctacgacgttccgatagctaccctt
gatttcgcgtctctataccccagtattattcaagcacataacctctgttacaccactctt
ttaaaaaagtcaaccatcgacgcacaccagatgaaagaaggagaagactatatcgtgaca
ccaaacggggatagattctgcacgtcgaaagtccgcaaaggactcctgactcagatcctg
gaagaacttcttggagcgagaaagcgtgcgaagaaggagcttgcagtggaaacggatccg
ttcaaaaaggctgtattgaacggacgacaacttgctcttaaaatcagcgccaacagcgtt
tacggactgactggcgcaactgttggtaaactgccatgtttgccaattgccagtagcacg
actagttacggccgccaaatgattgagaagactaaagaagaagtagaggctaaatatacc
atcgccaacgggtattctcatgatgctaaagttgtgtacggtgatacggactccgtaatg
gttaagtttggaatgaaagaccttgcagaggcgatgaaacttggccaggaagcagctgat
tatgtttcatccaagttcatcaatcctataaaattggaattcgagaaagtgtatttccca
tacctccttatcaataagaaacgctatgctggtctctattggaccaagccagacaagtat
gataaaatggataccaagggaattgaaacagtccgcagagacaactgccgtatggttcag
acggttatcgaaactgtcctcaggaaaatactcattgatcgggacgttgatggtgcccaa
agttatgtgaaggatacgatatctgatctactccaaaacaaaatcgatatgtctaaactc
gtgattacgaaggccctctcgaaaaaggattacacagcgaaacaagcgcacgtcgagctg
gcagagagaatgaagaagcgcgacgctggctctgccccaactctgggtgaccgagttgca
tatgtcattgttaaaggtgctggaggatcaaagaattatgaaaaatcggaagaccctata
tacgtgctcgaaaacaacattccaatagacacgaaatactacctcgacaatcagctcgcg
aaacctctcacacgtatcttcgagcccatccttggcgaaaagaaagctggccagttgctc
actggagaacacactcgatccatctcagtcgcagccccgacattgggtggtctgatgaaa
ttcactaagaaaacacaaacctgtatgggctgcaagaagccccttacagggaaagagggc
tctgacggcgcggtttgtcaggattgtctcccgcggctcggtgagctatacactaaaact
ctaactaaagtgtctgatctggaggtgaggttcgggcgcttgtggacgcagtgccagcga
tgtcagggcagtttgcactgtgaggttatctgctcaagcagagattgtccgatattctac
atgcgaatgaaggcgaagaaggatgttgaggatgctgagaaggagttagcgcgctttgat
cacgacctaggggcctggtga
DBGET
integrated database retrieval system
