KEGG   Histoplasma mississippiense: HCAG_06542
Entry
HCAG_06542        CDS       T02229                                 
Name
(RefSeq) hypothetical protein
  KO
K01148  poly(A)-specific ribonuclease [EC:3.1.13.4]
Organism
aje  Histoplasma mississippiense
Pathway
aje03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:aje00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    HCAG_06542
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:aje03019]
    HCAG_06542
Enzymes [BR:aje01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.4  poly(A)-specific ribonuclease
     HCAG_06542
Messenger RNA biogenesis [BR:aje03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Other 3'-5' decay factors
     HCAG_06542
SSDB
Motif
Pfam: CAF1 FAM212 PUS7L_N
Other DBs
NCBI-GeneID: 5445527
NCBI-ProteinID: XP_001538937
UniProt: A6R8A1
LinkDB
AA seq 421 aa
MDVTKQSFSQHLPRLLNDLAESTFVALDLEFSGIVARQSGPSPGSDLWGEKQTLQERYEE
VKYAAETYQVLQIGLTFAREDTETGQSDRVQLTKLWGLKDDGRIKAVFLMKNGFRMEAPF
VEGLPYLSRLEEKQAMAKLAESEHSITKIMDVNPKDMDPESQAFLTQVRRLIDAWINETG
DKEDYLNIPEPCPLENGNTESPLGSWRFSLNSYQKRLVHQLVRVEYPSLVSIGRQTFVQI
IPYDKQREESIRVDKSRALRERVIQKTGFRWVVEGMVGGGLSAMDPRVFLSCISNPAPVN
TSTSALLSYSDDLQLKLKSRQPVLVGHNLFTDLINFYKCFIGDLPDRIEDFKNAIHALFP
LVIDTKYMATHNCSSMTPSSSLTEINDKLEQRRTPRIRSDQAGCGVVGRRNYFQPFRASD
Y
NT seq 1266 nt   +upstreamnt  +downstreamnt
atggatgtgacaaagcaatcgtttagccagcacctacctagactactgaatgacctggcc
gagtccactttcgttgccctagacctagagttttctggaatcgtcgcaagacagtctggc
cctagtcccggaagcgatctgtggggagagaaacaaactcttcaggaaagatacgaggaa
gttaaatatgcagctgagacctatcaagtgttgcaaattggcttgacctttgcaagggag
gacacggagactggtcagagtgatcgtgtgcagttgaccaaactttgggggttgaaagac
gatggtcgtatcaaagccgtgtttttgatgaaaaatggattccgaatggaagcaccgttt
gtagaggggctgccatatctgtcgcgcctcgaggaaaaacaagcgatggcgaaattagca
gagagtgagcatagtatcacaaaaattatggatgtcaaccccaaagacatggacccagaa
tcccaagcctttttaacccaggttcgccgtcttattgacgcttggattaacgagacagga
gataaggaagactacctcaacattccggaaccttgtcccctagaaaatggaaacacagaa
agcccattaggaagctggaggttcagtctaaacagttaccaaaaacgcttggtacatcag
ctggttcgggtagagtatccttcgctcgtctcaatcggtcgacaaacattcgtacaaatc
attccatacgacaaacagcgtgaggagagcatacgtgttgataaatcacgagctcttcga
gagcgggttatccaaaaaacggggtttcggtgggttgttgagggcatggttggaggtggc
ctctctgcaatggacccaagggtttttcttagctgtatctcaaatcccgctccagttaac
acgagcacgagcgccttgttgagctactctgacgacttacagttgaaattaaaatcaagg
cagcctgtgttggttgggcataacttgttcactgacctcattaacttttacaaatgcttc
attggggaccttccggatcgcatcgaagatttcaagaacgctatccatgctttatttccc
ctcgttattgacacgaaatatatggcaacgcacaattgttcatcaatgacaccctcgtcg
tccctgacagaaattaacgacaaactggagcagaggaggactccaagaatacgttctgat
caggctggctgcggagttgttgggagaaggaactatttccagcccttccgcgcctccgat
tactga

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