KEGG   Histoplasma mississippiense: HCAG_07349
Entry
HCAG_07349        CDS       T02229                                 
Name
(RefSeq) hypothetical protein
  KO
K15542  polyadenylation factor subunit 2
Organism
aje  Histoplasma mississippiense
Pathway
aje03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:aje00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    HCAG_07349
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:aje03019]
    HCAG_07349
Messenger RNA biogenesis [BR:aje03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     HCAG_07349
SSDB
Motif
Pfam: Beta-prop_WDR5 Beta-prop_WDR3_1st Beta-prop_THOC3 WD40 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_WDR3_2nd Beta-prop_CAF1B_HIR1 EIF3I WDR55 WD40_Gbeta ANAPC4_WD40 Beta-prop_Aladin Beta-prop_WDR36-Utp21_2nd Beta-prop_IFT140_1st Beta-prop_WDR36-Utp21_1st Beta-prop_EML Beta-prop_TEP1_2nd Beta-prop_RIG_2nd Beta-prop_TEP1_C Beta-prop_EIPR1 Beta-prop_WDR19_1st Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd Beta-prop_RIG_1st WDR90_beta-prop_4th Beta-prop_SCAP MIOS_WD40 Beta-prop_HPS5 Beta-prop_WDR41 Beta-prop_ACSF4
Other DBs
NCBI-GeneID: 5444011
NCBI-ProteinID: XP_001537927
LinkDB
AA seq 619 aa
MSSYDHDAAEGSFPRPLRSYEGGVGGPRRPRPVTDYGSSMVQWMRVRQPRYKGSHRLERE
RPSASYTVDMLPPLARIDSPADTIPVRHLHQSIGKSKKPITVVRWTPEGRRLLTGGHTGE
FMLWNGTAFNFETVMDGDIKYWRPNFNNVETVDDAHHDAVRDLSWCPSDTKFVSASDDTT
LKIFYFTARMCELVLTGHGWDAKSCDWHPSKGLLVSGSKDHQVKFWDPRTGRCLTTLHSR
KNTVTWTRFSRVNSNLVATSSRDHCARVFDLRMMRDICILRGHEKPISSMTWHPIHSSLI
STGSEDGSIHHYLLDEQNLPAGQVPTVAPYDSADPANTPAQLIFPAHRIPYAHSSTIWTL
DWHPLGHILASGSKDNFTRFWSRARPGETSYLKDRFHIGEEAAEAQGTWSRGFGRRQMKE
EEEQELQDEAEGLVDQKKRDASVLLGIQGVPGVGDNVGLPGLIPGIGAVQPPPPPPSGTV
SSMSQVEPSRLAAMISSGSFPPPQLESLPPNLRPPAYPMPGMQGGGFVPHMDLSSLQNQF
FSPQQQHQQQSYTLQQNQNFPTQGGGGFTSSGIPGLQGQAPTGDPNEDFTNGIRKRGPLP
SQQDSLMEEQRRGNWRNIR
NT seq 1860 nt   +upstreamnt  +downstreamnt
atgagttcttacgaccacgatgctgcggaggggtcattcccacgcccgctgaggtcatac
gagggaggggtgggaggtccccgaagacccagacctgtgaccgactatggctcgtcaatg
gtgcagtggatgcgggtgcgccagcctcgatacaaaggatcacataggttggaacgtgaa
agaccaagcgccagctacactgtggatatgctccctcccttggcccgaatcgattcacct
gctgacaccatccccgttcgtcatctccaccaatcaatcggtaaatcgaagaagcctatt
acggtcgtcagatggacgccggagggacgacggttgttgacaggaggtcacactggcgag
ttcatgctatggaatggtacagcattcaatttcgaaacggttatggatggagacatcaag
tactggcggcccaacttcaacaacgtcgaaaccgtcgacgacgcccaccacgacgccgtc
agggatttgtcgtggtgtccaagcgatacgaaattcgtctctgcctctgacgacacgaca
ctaaagatcttctacttcaccgcccgcatgtgcgagctggtgctgacgggccacggctgg
gatgcaaagtcgtgcgattggcatccgtccaagggcctcctagtctccggatccaaggac
caccaggtcaagttttgggacccccgcaccggccggtgtttgactaccctccacagccgt
aagaatacagtcacttggactagattctcgcgtgtgaacagtaacctagtggcgacatca
tcccgggaccattgcgcccgcgtcttcgatctacggatgatgcgagacatatgcatttta
cgaggacatgagaagccgatatcttccatgacgtggcacccgattcatagttcgcttatc
tctacgggaagtgaagatggttcaattcatcattatttattggatgagcagaatctacct
gctgggcaggtccccactgtcgcgccatacgacagcgctgatcctgctaatacccccgcc
caacttatattccccgctcatcgtattccctatgcccattcgtctactatatggaccctc
gactggcatcccctcggccacattctggcgtccggctccaaggataattttacccgattt
tggtcccgcgcccgacccggcgaaaccagctatctgaaggatagattccacattggcgaa
gaagccgcagaagcccagggaacttggagccgtggctttggccgtcgacagatgaaggaa
gaagaggagcaggaacttcaagatgaggcggagggacttgttgaccagaagaagcgcgat
gcttcagttctcctcggaatccagggtgttcccggggttggggataatgtcgggcttcca
gggctgataccaggaattggggcagttcagccacccccgccacccccttcaggtacggtt
tcatccatgtcgcaagtcgaaccgagccgtctggcggcgatgatatcctccggctcgttt
cctccgccacaactcgaatccttaccaccaaacttacgtccgccggcatatcccatgcct
ggtatgcagggaggtggtttcgtcccacatatggatctatcatccttacaaaaccagttc
ttttctccacaacaacagcaccagcagcaatcctacacgttgcagcaaaaccaaaacttt
cctacgcagggtggcggaggcttcacgtcttcaggaatccccggtcttcagggccaagcc
ccaaccggcgaccccaatgaggatttcacgaatggaataaggaaacgcgggcctttgcca
agccagcaagatagcttgatggaagaacaacgacggggaaactggcgaaatattagataa

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