Histoplasma mississippiense: HCAG_07426
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Entry
HCAG_07426 CDS
T02229
Name
(RefSeq) similar to ATP dependent helicase
KO
K12813
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 [EC:
5.6.2.6
]
Organism
aje
Histoplasma mississippiense
Pathway
aje03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aje00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
HCAG_07426
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aje03041
]
HCAG_07426
Enzymes [BR:
aje01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
HCAG_07426
Spliceosome [BR:
aje03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
HCAG_07426
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helicase_C
DEAD
AAA_22
AAA_19
PWI
AAA_30
SRP54
nSTAND3
Cas3-like_C_2
ATG43
Sigma54_activ_2
TsaE
AAA_23
ABC_tran
Motif
Other DBs
NCBI-GeneID:
5444280
NCBI-ProteinID:
XP_001538004
UniProt:
A6RCR8
LinkDB
All DBs
AA seq
823 aa
AA seq
DB search
MDIRTYISDSLLRLTGASDATVIDYILATTSSAKSAGSLHEKLGPFLDGDEGDIHSFCAE
LWKRVRGGSSAEDGGKKASKEKGGDGLKKRYKLVDMEEEDVDVNAGLAPLQSTEAGKLRR
KAKENGESGQSRDRDDDSRRRRAHRDARGERKREREGDHDRDGRHRWKKREEREPRQHSR
SPRSSSPSSDIDPETKAERARQRDLKERDEFAKRLAQKDESKSKKIVEDRSSTKDSQAAR
RRALADDAAARSAAMPDLRLRSRQEYLKKREAERLALLRKQVAEETAELRENPNLTRREK
DEFAKNREVLRLAEERMRIDDYRDGYALPEDYITEKGKIDRKRKEEALYKRYVDRDEHGH
ERFITEHEEWENEQTAKAKAQIQRAEFVDEGDYEYVFDDAQKINFIMDSKLEGDRKPLTK
DQLLFQQKLDAAEQKAASIEETRKSLPIYRFREEIIQAVADHQVIIIVGETGSGKTTQIP
QYLHEAGYTKGGMKIGCTQPRRVAAMSVAARVAEEMGVKVGNEVGYAIRFEDATSDKTVL
KYMTDGMLLRELLTEPDLGGYSALMIDEAHERTVSTDIACGLLKDIAKARPDLKLLISSA
TIDAQKFQKYFDDAPIFNIPGRRYPVDIHYTSQPEANYLAAAITTVFHIHISQGAGDVLV
FLTGQEEIEAAEQSIQETARKLGSKIPELIICPIYANLPSELQAKIFEPTPPGARKVVLA
TNIAETSLTIDGIVYVIDPGFVKENVFNPRTGMESLVVTPCSRASAGQRAGRAGRVGPGK
CFRLYTKWAFYNELEENTTPEIQRTNLNGVVLMLKYSRDRPAS
NT seq
2472 nt
NT seq
+upstream
nt +downstream
nt
atggatatccggacatatatctctgactccctcctacggctaacgggtgcgtcggacgcg
acagtcatcgattacatcctcgccaccacaagctctgcgaaatctgccggctccttacac
gagaagctaggaccgttcctggacggagatgagggtgatatccattcgttctgcgctgag
ctctggaaacgggtgcgtggcggttcaagtgcggaggatggcggcaaaaaggccagcaag
gaaaagggaggggatgggttgaagaaaagatacaaattggttgatatggaagaagaggat
gtggatgttaatgctggattggccccgctgcagagtacggaggcggggaagctgagaagg
aaggcgaaggagaacggggagagtggacagagtcgggatcgcgatgatgattccaggcgc
aggcgtgcgcatcgcgatgcgagaggggagcggaagcgagagcgagagggcgaccatgat
cgtgatggtcggcatcggtggaagaagcgcgaggaaagagaaccacgacaacactctcga
agccctcgatcctcttctccctcttcggatatagatcccgagaccaaagcagagcgagcc
agacagcgcgaccttaaggaacgagatgaattcgcgaaacgccttgcgcaaaaggacgag
tcgaagtcgaagaagatcgttgaagatcggtcttctacgaaggactcacaagctgcccga
cgtcgtgcgctggctgacgacgctgcagcgaggtcggcggcgatgccggatctgcggctt
cgctcgcggcaggaatatctcaagaaacgtgaagcggagcggttagctctgctgcgcaag
caagtggcggaggaaaccgctgagcttcgcgagaatccaaacttgacgcgtcgggaaaaa
gacgagtttgcgaagaatagagaagttcttcggttagcggaggaaagaatgcggattgac
gattatcgggatggctatgcgttgccggaagattatatcactgaaaaaggcaagattgat
cgaaaacggaaagaagaagcgctttacaagcgatatgttgatcgggacgagcatgggcat
gagcgattcattaccgagcatgaggagtgggagaatgagcagacggccaaggctaaagcg
caaattcaaagggcggagtttgttgatgagggagactacgaatatgtgtttgacgatgcg
cagaaaataaatttcatcatggattcgaagttggaaggggaccgaaagccgttaacaaag
gaccagctactgttccagcagaagctagatgcggcggagcagaaagcagcttccattgaa
gagacaaggaagagtttacctatctaccgattcagagaggaaattatacaagctgtagcg
gatcatcaggttattatcatcgttggagaaactggtagtgggaaaactactcagattcct
cagtatttgcacgaggcgggttatactaaaggggggatgaagattggttgcacacagcct
agacgagttgcagcgatgagcgttgctgcgcgtgtcgctgaggagatgggtgttaaagtt
gggaatgaagttggatatgccatccggtttgaggatgctaccagcgacaaaacagtgctc
aaatatatgactgatggtatgctactgcgtgaactgctcacggagcctgacctcggggga
tattctgcactgatgattgatgaagctcacgagagaaccgtatccacggacattgcgtgt
ggcctgttaaaggacattgccaaggcaagacctgatctaaaattacttatctcgtcagcg
acaattgatgctcaaaaatttcagaaatattttgatgatgcgccaattttcaacattcct
ggccggagatatcctgttgacatacactatacgtcgcagccagaggcaaattatcttgcc
gcagcgatcactaccgtgttccacatccacatcagtcagggtgctggtgacgtcttggtc
tttctcacgggccaagaggagattgaagctgcagaacagagtatacaagaaacggctcgg
aaactaggatccaagataccggaactgataatatgtcccatctacgcgaacttgccttcg
gaacttcaagccaaaatctttgaacctacgccccccggagcgcgaaaagtggtccttgct
acaaacattgcagagaccagtctgaccattgacggaatcgtgtacgtgattgacccaggc
tttgtgaaagaaaacgtgttcaaccctcgtactggaatggagagccttgtcgttaccccc
tgctcgcgcgcatctgcaggccaaagagcaggaagagcaggccgtgttggcccgggcaaa
tgtttccggttatatacaaaatgggcattctacaacgagctagaggaaaatactacgcca
gaaatccaacggacaaacctcaacggagtcgtcttgatgttgaaatactctcgggatcga
ccagcttcttga
DBGET
integrated database retrieval system
