Histoplasma mississippiense: HCAG_07565
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Entry
HCAG_07565 CDS
T02229
Name
(RefSeq) pre-mRNA splicing factor slt-11
KO
K12872
pre-mRNA-splicing factor RBM22/SLT11
Organism
aje
Histoplasma mississippiense
Pathway
aje03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aje00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
HCAG_07565
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aje03041
]
HCAG_07565
Spliceosome [BR:
aje03041
]
Complex B
Other components
Prp19-related factors
HCAG_07565
Complex C
HCAG_07565
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
STL11_N
RRM_1
Nup35_RRM_2
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
5443934
NCBI-ProteinID:
XP_001537256
UniProt:
A6RD57
LinkDB
All DBs
AA seq
405 aa
AA seq
DB search
MPPPQIKQDINRSGWETTDFPSVCESCLPDNPYVQMLKEDYAAECKICTRPMTMFQWKPD
RTARTKRTNICLTCARLKNCCQCCMLDLSFGLPIVVRDAALKMVAPGPQSSINREYYAQE
HEKEIEEGRGAVEEYAKTDEKARDLLRRLANSEPYYKRQRRMDNTNTRNRENEDLQEDGS
SGQRQIGYGPGPNTGGSTPGPIRSSDIRRGGPHGRGRGGGMRGGRGRGGGRGFPSVAQLP
PGPQDILPPDDPNITSLFITGVEDDLPEHALRTFFTEFGTLRSLICSHRSHCAFINYASR
EAAEKAANHCQGKAVIQGCPLRVQWGKPRPLDNMEREERMQYARQGRAVVPRKNQGAGGA
GRTTNEAALGGSAGATGQEEQHQPSFVVAPPPGSGEVQYASLAGD
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atgccccctcctcagataaaacaagatatcaaccgctctggctgggagacaacagatttc
ccctccgtctgcgaatcatgtcttcccgacaacccttacgtccaaatgctcaaggaagac
tatgccgctgagtgtaaaatatgcacccgcccaatgaccatgttccaatggaaaccagat
cgcacagcacgcacaaaacggacaaatatctgcctgacatgcgctcggctgaagaactgt
tgtcagtgttgcatgctggatctgtccttcggcctgcctatcgttgttcgggatgcggcc
ttaaagatggtggcgccaggtccgcagagctcgataaacagagaatactacgcacaggaa
catgagaaggagattgaggaagggagaggggcggtggaggaatacgcaaagactgatgag
aaggctagagacctgctgcggaggctggcgaatagtgaaccatactacaagcgtcaacga
aggatggataacaccaacaccaggaacagagagaacgaagatctgcaagaagatggaagc
tcaggacaaaggcaaataggatacggaccgggaccgaacaccggaggatctaccccgggg
cccattcgaagtagcgatattaggcgtggcgggcctcatggtcgcggaagaggaggaggg
atgcggggcgggcgtggtcgtggtggtggacgaggttttcccagcgtcgcccaactccct
ccaggaccccaagacatccttccccccgatgatccgaacataacctctcttttcatcacc
ggtgtcgaagacgatctccccgaacacgcccttcgcacattcttcaccgaattcggcacc
ctgcgctccctcatctgctcccaccgctcacactgcgcttttatcaattacgcgtcgcga
gaggcggcggagaaagctgcaaaccattgtcaaggcaaagccgtgatacagggctgcccc
ttgcgtgtgcagtggggtaaaccgcgaccgttggataatatggaaagggaggagagaatg
cagtatgcacggcagggacgggcggtggtccctagaaagaatcaaggcgcaggaggtgca
gggagaaccactaatgaagctgctcttggagggagtgcgggggcgactgggcaagaagaa
cagcaccagccatcgtttgtcgtcgcgccgccgccggggagtggggaggtgcagtatgcc
agtttggcgggtgattga
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