Histoplasma mississippiense: HCAG_07796
Help
Entry
HCAG_07796 CDS
T02229
Name
(RefSeq) hypothetical protein
KO
K12816
pre-mRNA-processing factor 17
Organism
aje
Histoplasma mississippiense
Pathway
aje03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aje00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
HCAG_07796
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aje03041
]
HCAG_07796
Spliceosome [BR:
aje03041
]
Complex C
Other components
Step II factors
HCAG_07796
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
EIF3I
Beta-prop_EML_2
WDR55
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
Beta-prop_EIPR1
Beta-prop_IFT122_1st
Beta-prop_RIG_2nd
Beta-prop_TEP1_2nd
Beta-prop_SPT8
WD40_RFWD3
Beta-prop_SCAP
WDR90_beta-prop_4th
Beta-prop_DCAF4
WD40_MABP1-WDR62_1st
Motif
Other DBs
NCBI-GeneID:
5443875
NCBI-ProteinID:
XP_001537487
UniProt:
A6RDT8
LinkDB
All DBs
AA seq
583 aa
AA seq
DB search
MASLLGANYESSSDDEVKQNVPVKSTPAPVPASGIVAAPDVSIEDSSRLQLMLAKSTDTA
LTYNATYDDLSRPTLGPENPFRSAHGGNALKRKNVLTGHAEETLISEATFNSQHRTFQAF
GYTQDPSVPGAFVGDLEAAARLGGKNVVQMRPSKEASAALRRKRQKKGDSSIVEGEGAYL
GPWARYEDDDLMYEEELDLAGRELASDEEYIDEAIVPSNVPAMDKKATAYKEDTSHTETT
EFHGSEQFDYQGRTYMHVPQDLDIDLKKEVGSIKNYVPKKLVHTWKSHTKPITSLRFFPN
SGHLLLSSSADSKIKIWDAYHSRELLRTYSGHSNAVTDTTFHPTGTTFLSGSYDRQIKLW
DTEYGKCISRFSTGKTPHVIRFNPDPDHSHEFLAGMSDKKIIQFDTRTGAITQEYDHHLA
AVNTLTFVDNNRRFISTSDDKSLRAWEYNIPVPIKFIAEPYLYALVRAAPHPNGKYVAFQ
SGDNQIVVYASTDKFRQNRKKSFRGHNNAGYAIDVAISPDGQFVTSGDSGGYVCFWDWKT
GKMWHKIMAGGKEGAAITCVEWHPQETSKVATAGLEGVIKYWD
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atggcttctcttctgggtgccaattatgaatcttccagcgacgatgaagttaaacaaaat
gtgccagtcaagtcaacaccagctcccgtcccagcttcagggatcgtcgcagcacctgac
gtctccatagaggattcttcgcgcttacagctgatgcttgcaaaatcgaccgacaccgcc
ttaacttacaacgccacctatgatgacctatcacgaccaactttgggaccggaaaatccc
ttccgctccgctcatgggggtaacgcgctgaagaggaaaaacgtattaacggggcatgcg
gaagaaactttgataagcgaggcgacgtttaattctcagcatcgaacatttcaggccttt
ggatacacacaggatccaagtgtccctggggcatttgtcggggatttggaggccgctgca
cgtctggggggtaaaaatgtggtgcaaatgcgtccttccaaggaggccagcgctgcattg
aggaggaagaggcaaaagaaaggggattctagtatcgtcgaaggagaaggcgcatatctc
ggcccttgggcgagatacgaggatgatgatctcatgtacgaggaagaattggacctagcc
ggtcgggaactggccagcgatgaggaatatattgacgaagcgattgtgccgtcgaatgta
ccagctatggataaaaaggctacggcgtacaaggaagatacgtcccataccgaaacgaca
gaatttcatggttcggagcagttcgattatcaaggaaggacatacatgcacgttccccag
gatctggacatcgacctcaaaaaggaggtgggcagtatcaaaaactacgtacccaaaaag
ctggtccatacttggaaatcacacacaaaacccattacttccttgcgcttcttccccaac
tcaggacacctcctcctctcctcctctgccgattcgaaaattaaaatatgggatgcgtac
cactcccgagagcttctgcggacatattccggccattccaacgcagtcaccgacaccacc
ttccacccaacgggcaccacttttctctcaggctcatacgaccgccaaatcaagctctgg
gacacagagtacggcaagtgtatctcccgcttctcaacgggaaaaacaccacacgtcatc
cgcttcaacccagacccagatcactcccatgaattcctcgctggtatgtccgataaaaaa
atcatccaattcgacacccgcaccggcgccatcacgcaagaatacgaccaccatctcgcc
gccgtcaacacacttacttttgtcgataacaaccgccgcttcatctccacctcagacgac
aaatcgctgcgtgcgtgggaatacaacatccccgtccccatcaagttcatcgcggagccg
tatctgtacgcactcgtgcgtgcagctccccatcccaatggcaaatacgtcgccttccag
tccggcgacaaccagatcgtcgtgtacgcctccacggacaagttccgccagaatcgcaag
aagagtttccgtgggcataacaatgctggatacgcgatcgatgtggctatcagtcctgat
gggcagttcgtcacgtcgggtgatagtggtggatacgtgtgtttctgggattggaagaca
gggaagatgtggcataagatcatggctggagggaaagaaggggcggcgattacatgtgtg
gaatggcatccgcaggagactagcaaggttgcgacggctggactggagggcgttattaag
tattgggattaa
DBGET
integrated database retrieval system