Histoplasma mississippiense: HCAG_08281
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Entry
HCAG_08281 CDS
T02229
Name
(RefSeq) small nuclear ribonucleoprotein LSM2
KO
K12621
U6 snRNA-associated Sm-like protein LSm2
Organism
aje
Histoplasma mississippiense
Pathway
aje03018
RNA degradation
aje03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aje00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
HCAG_08281
09123 Folding, sorting and degradation
03018 RNA degradation
HCAG_08281
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aje03019
]
HCAG_08281
03041 Spliceosome [BR:
aje03041
]
HCAG_08281
Messenger RNA biogenesis [BR:
aje03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
HCAG_08281
mRNA degradation factors
5'-3' decay
Lsm complex
HCAG_08281
Spliceosome [BR:
aje03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
HCAG_08281
Complex C
U2 snRNP components
HCAG_08281
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
LRR_9
Hfq
DUF402
Motif
Other DBs
NCBI-GeneID:
5442879
NCBI-ProteinID:
XP_001536499
UniProt:
A6RF65
LinkDB
All DBs
AA seq
98 aa
AA seq
DB search
MLFFSFFKTITNHTVTIELKNDIRIRGTLKSVDQYLNIKLDDIEVLDLDEYPHLSSVKNI
FVRGSVVRYIVLPQAEVDRGLLEDATRREAENQAHKTR
NT seq
297 nt
NT seq
+upstream
nt +downstream
nt
atgttgttcttcagtttttttaagactatcacaaaccacacagttacaattgaactaaag
aatgacatccgcatacgtggcactcttaaaagtgttgaccaatatctgaatatcaagctg
gatgacattgaggttcttgacctggatgaatacccacatctctccagtgtgaagaatatt
ttcgttcgagggagcgtggtccgatatatcgtcttaccgcaggcggaggtagatagggga
ttattggaggatgccacaaggagagaagctgaaaatcaagcgcataaaacccgatga
DBGET
integrated database retrieval system
