Histoplasma mississippiense: HCAG_08342
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Entry
HCAG_08342 CDS
T02229
Name
(RefSeq) hypothetical protein
KO
K12881
THO complex subunit 4
Organism
aje
Histoplasma mississippiense
Pathway
aje03013
Nucleocytoplasmic transport
aje03015
mRNA surveillance pathway
aje03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aje00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
HCAG_08342
09122 Translation
03013 Nucleocytoplasmic transport
HCAG_08342
03015 mRNA surveillance pathway
HCAG_08342
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aje03019
]
HCAG_08342
03041 Spliceosome [BR:
aje03041
]
HCAG_08342
Messenger RNA biogenesis [BR:
aje03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
HCAG_08342
TREX complex
HCAG_08342
Spliceosome [BR:
aje03041
]
Complex C
Other components
EJC/TREX
HCAG_08342
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
HCAG_08342
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
Motif
Other DBs
NCBI-GeneID:
5442942
NCBI-ProteinID:
XP_001536560
UniProt:
A6RFC6
LinkDB
All DBs
AA seq
174 aa
AA seq
DB search
MSLDMWWVALRSCITEPSLRCCAFFRGILPLRRGLGNSEYFHKSAGPVKKVMLTYNQNGT
SRGIASITFIEVVLDASRAPTVPAVKPLTERVAPNPNPYQPRRPVRAQGAAATVADGMWD
ARNPSLSQSLMRRWKTTFPRRIPFQPQRTEPHSQLRLGGRTSEWMRYLKPIYTG
NT seq
525 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctcgacatgtggtgggtggcgttaagatcttgtataacagagccctctcttcga
tgttgcgccttctttcgagggatcttaccattgcgacgtgggctcggtaattcggaatat
ttccacaaatctgctggacctgtgaaaaaggtcatgctcacctacaaccaaaatggtact
agccgcggcattgcttccattaccttcattgaggttgttcttgatgcatctcgcgctccc
actgttcctgccgtgaagcccctaacggaacgtgtcgcccccaacccaaacccgtatcag
ccacgaaggccagtgcgggctcaaggcgcagccgcaaccgtcgcggacggaatgtgggac
gcccgaaacccaagtctatcgcagagcttgatgcggagatggaagactactttccctcgt
cgaataccgttccagccgcaacgaacggagccgcacagccagctgcggctgggggggagg
acctcggaatggatgagatatcttaaaccgatatacactggataa
DBGET
integrated database retrieval system
