KEGG   Histoplasma mississippiense: HCAG_08343
Entry
HCAG_08343        CDS       T02229                                 
Name
(RefSeq) hypothetical protein
  KO
K12881  THO complex subunit 4
Organism
aje  Histoplasma mississippiense
Pathway
aje03013  Nucleocytoplasmic transport
aje03015  mRNA surveillance pathway
aje03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:aje00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    HCAG_08343
  09122 Translation
   03013 Nucleocytoplasmic transport
    HCAG_08343
   03015 mRNA surveillance pathway
    HCAG_08343
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:aje03019]
    HCAG_08343
   03041 Spliceosome [BR:aje03041]
    HCAG_08343
Messenger RNA biogenesis [BR:aje03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     HCAG_08343
    TREX complex
     HCAG_08343
Spliceosome [BR:aje03041]
 Complex C
  Other components
   EJC/TREX
    HCAG_08343
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    HCAG_08343
SSDB
Other DBs
NCBI-GeneID: 5442929
NCBI-ProteinID: XP_001536561
UniProt: A6RFC7
LinkDB
AA seq 132 aa
MADKLDKSLDDILSSRRTARRTSQRRRDTRSTRASHNTAPVGGVKKTVRNAKSTSKSIPT
GPSMGLGESKIIVSGLPSDVGEANIKLWLAGHWPDAKRSKLSSVSISRLPCTRRLIWQLF
TMSPEPNGSQVV
NT seq 399 nt   +upstreamnt  +downstreamnt
atggcggacaaactggacaaatctcttgatgatatccttagctccaggcgtacagcccgt
cgcacctcccagcgacgtcgcgataccagatccacaagggcatctcacaatactgcacct
gtaggtggcgttaaaaagactgtcagaaatgcgaaatccacttccaagtctattcctaca
ggcccatctatgggtctgggcgaaagcaagatcatcgtgagcggcttgccctccgatgtc
ggtgaagcgaatatcaagctttggctcgccggtcattggcctgatgcaaagcgcagcaag
ttgagctctgtctccatctcgcgactcccctgcacccgaaggcttatctggcagctcttc
acaatgtctcctgagccaaacgggtcgcaggtcgtgtaa

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