Histoplasma mississippiense: HCAG_08709
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Entry
HCAG_08709 CDS
T02229
Name
(RefSeq) similar to DEAD box polypeptide 17 isoform 2
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
aje
Histoplasma mississippiense
Pathway
aje03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aje00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
HCAG_08709
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aje03041
]
HCAG_08709
03009 Ribosome biogenesis [BR:
aje03009
]
HCAG_08709
Enzymes [BR:
aje01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
HCAG_08709
Spliceosome [BR:
aje03041
]
Complex A
U1 snRNP components
U1 related factors
HCAG_08709
Complex B
HCAG_08709
Ribosome biogenesis [BR:
aje03009
]
Eukaryotic type
Pre-60S particles
Helicases
HCAG_08709
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_C_2
Motif
Other DBs
NCBI-GeneID:
5442762
NCBI-ProteinID:
XP_001536388
UniProt:
A6RGE3
LinkDB
All DBs
AA seq
542 aa
AA seq
DB search
MSYGGGYGSSRDHYGGGGGGGYSRGGGYGNGYGNSNGYSHGHSSGGYGSYGGAGGYGGGT
GGDRMSNLGAGLKTQNWDLSTMPKFEKSFYKEHPNVSQRSTHEVDAFRKEHEITVQGKNV
PRPVETFDEAGFPQYVMSEVKAQGFARPTAIQAQGWPMALSGRDVVGIAETGSGKTLTYC
LPAIVHINAQPLLAPGDGPIVLVLAPTRELAVQIQTEITKFGKSSRIRNTCVYGGVPKGP
QIRDLTRGVEVCIATPGRLIDMLEAGKTNLRRVTYLVLDEADRMLDMGFEPQIRKIVSQI
RPDRQTCMWSATWPKDVRQLAQDFLHDYIQVNIGSMDLSANHRITQIVEIVSEFEKRDRM
AKHLDRIMEANKHSKVLIFTGTKRVADDITRFLRQDGWPALSIHGDKQQNERDWVLNEFK
TGKSPIMVATDVASRGIDVRDITHVLNYDYPNNSEDYVHRIGRTGRAGAKGTAITLFTTD
NAKQARDLVAILSESKQQIDPRLAEMARYGSGGGGNRWGGRGRGRGGFTASNAAPLGNNR
RW
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atgtcctacggtggaggctacggttcctcgcgagaccactatggtggtggaggcggcggc
ggctactctagaggtggtggctacggaaatggctacggaaatagcaacggttactcgcac
ggccactccagcggtggttatggctcatacggaggagctggcggctacggcggtggcacc
gggggtgacagaatgtcaaaccttggcgccggcttgaagacgcaaaattgggacctctca
actatgcccaaatttgaaaaatcgttctacaaagaacaccctaatgtttcgcagcgatcg
actcacgaggtcgatgcgtttcgcaaagagcatgaaatcacggtgcaaggcaaaaacgtt
cctcgaccagtggagacttttgatgaagctggcttcccgcaatacgttatgtcagaggtc
aaagcccaagggtttgcgaggcccacggccattcaggcccaagggtggcccatggccctc
tctggccgtgacgtggttggtattgccgaaactggatccggaaagactttgacgtattgt
ttgcctgctattgttcacatcaacgctcagcctctccttgctccaggagatggccccatc
gtccttgttcttgcacctactcgtgagttggcagttcagatccaaactgagattacgaaa
tttgggaaatcatctcgtattcggaacacttgtgtatacggcggtgtccccaaagggcct
cagattcgtgacttgactcgtggtgtcgaagtctgtatcgccactccaggccggttgatc
gacatgttggaggcaggaaaaactaacctacgacgtgttacttaccttgtcctcgatgaa
gcagatcgtatgcttgacatgggtttcgaaccccagatccgcaaaattgtttcacaaatt
cgtcctgaccgacaaacttgcatgtggtctgctacttggcccaaagatgtccggcaactc
gcccaggacttcctccacgactatattcaggtcaatattggctctatggatttgtctgct
aaccacaggattactcaaatcgtggaaattgtttcagaattcgagaaacgtgatcgcatg
gcgaagcaccttgaccgtattatggaggccaataaacattccaaagtcctcattttcact
ggaactaaacgtgttgctgatgacatcactcgattcctccgacaggatggatggcctgcg
ctttctatccacggcgacaaacaacaaaatgaacgtgattgggtcttgaacgaattcaag
accggaaaaagcccgatcatggttgccaccgatgtggcttcccgtggtattgatgttcgc
gatattactcatgtgttgaactatgactatccgaataattcggaagattatgttcacaga
atcggccggacaggtcgtgctggtgccaagggaactgcaattaccctgttcaccactgac
aatgctaagcaggctcgtgatctggttgctattctctctgaatctaaacagcagatcgat
cctcgccttgccgagatggcccgctacggtagtggcggcggcggtaaccgatggggtggt
cgtggccgcggtcgcggtggcttcaccgcttcaaatgcagcacctctgggcaataatcgc
cgctggtaa
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