Histoplasma mississippiense: HCAG_08775
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Entry
HCAG_08775 CDS
T02229
Name
(RefSeq) hypothetical protein
KO
K14408
cleavage stimulation factor subunit 3
Organism
aje
Histoplasma mississippiense
Pathway
aje03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
aje00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
HCAG_08775
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aje03019
]
HCAG_08775
Messenger RNA biogenesis [BR:
aje03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
HCAG_08775
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Suf
HAT_PRP39_N
HAT_Syf1_CNRKL1_N
TPR_14
HAT_PRP39_C
HAT_Syf1_CNRKL1_C
HAT
TPR_16
Motif
Other DBs
NCBI-GeneID:
5442688
NCBI-ProteinID:
XP_001536453
LinkDB
All DBs
AA seq
917 aa
AA seq
DB search
MPSQALGPFAVVEEDSDQDRGDAEYEPPAALSHVHSDGDGGGRDGDGDDDNMASSGSRQY
SLSQSANGNVSQYHVSHHMQTVQDKNSPQDVPPPNSSSLTPSYAGISAPSDGASNYLQDD
LKPPTMTAGDATPQSANRSMSSTPTAAALSRGRLPHDRVGILEDRIQADPRGDTDAWLEL
INEHRSRNKLESAREVYDRFFKVFPSAAEQWVAYANMESENNELYRLEQIFNRSLLSIPN
VQLWSVYLDYVRRRNNLTTDTTGQARGIISSAYDFALQNIGVDKDSANIWVDYIQFIRSG
PGNIGGSGWQDQQKMDLLRKAYQRAICVPTQAVNSLWKEYDQFEMGLNKLTGRKFLQERS
PAYMTARSSFTELQNITRDLVRASLPRLPPAPGCEGEEMYNKQVEIWRRWIKWEKDDPLV
LKDEDAGAGYKARVLYVYRQSLMALRFLPEIWFDAAEFCFQNGMESEGNDFLKQGIDANP
ESCLLAFKLADRLEVTTESEQDSKKRGAKVREPYDRLLDAFYDLISKAKAQEIKDIDFIE
KSFSSDADKPQRQVMVINNEEDDEGDDVAKAREAAKNSQIEALKKRHAEEIGQLSKVISF
AWIALMRSMRRIQGKGKPGEMAGSRQIFADARKRGRITSDVYIASALLEHYCYKDPAATK
IFERGAKLFPEDENFTLEYLKHLIDINDIMNPALKQFPHRFSTPTFDPTGFQPILSPSQT
KPKLSSITPTEEEMQSRQDSPPARYLGAPGPAAGPGPPSTTTHSPKRPYVLDELDEDSSN
RPRKFVRAESPLKGAAGRRLNQQKQQIQQQVVNGSGGGGGGGMGGAYGGGGQGNKPPIPV
PLPREIMFLLSIIPGASTYDATRFSPEKMVMLLRHLEVPSSVSQLRPPVPPLGVAGSTGV
VGGLNRGQYMSGYRPGS
NT seq
2754 nt
NT seq
+upstream
nt +downstream
nt
atgccgtctcaggccctgggcccttttgctgttgtcgaggaggatagtgaccaagataga
ggcgatgctgaatatgagcctcctgcagcgttaagtcatgttcacagtgatggagatggt
ggtggcagggatggggatggggatgatgataatatggcttcttctggcagtcgccagtat
tccctttctcaaagtgcaaatggaaatgtttctcagtatcatgtatcacatcacatgcag
actgttcaagacaaaaactctcctcaagatgttcctcctcctaatagttcatctcttact
ccttcctatgctggtatttcggcaccaagtgatggtgcctccaactatttgcaggacgat
ttaaaaccaccgaccatgacagctggcgatgctacccctcaatctgcgaacaggtctatg
tcctctactcctacggccgctgcattgtcgcgaggccgccttccgcatgatcgagtgggt
atattagaggataggattcaggctgatccacggggcgatacggatgcctggttggagttg
atcaacgaacaccgttctcgaaataagcttgagagtgcacgagaggtctacgacagattt
ttcaaggttttcccgtcagctgctgagcaatgggttgcatacgcgaacatggaatcggaa
aataacgagctctatcgattagagcagatttttaataggagtctcttgtccatacctaat
gttcagttatggtctgtatatctcgattatgttcgtcgccgtaataatttaaccacagac
acaaccggtcaagctcgaggtatcatttcatccgcctacgattttgctttgcagaatatt
ggagtggataaagactctgcaaacatctgggttgattacatccagttcattcgctccgga
cctggaaacattggtggttctggctggcaagatcaacagaagatggatcttttgcgaaaa
gcgtaccagagagctatatgcgtccctacgcaggcggtcaattccctttggaaggagtac
gatcagttcgaaatgggcctgaataagttgactggtcggaaattcctccaggaaagatct
ccagcgtatatgacagcgcggagctcctttaccgagttgcagaacattaccagagacctt
gttcgtgcctcgttacctagattacccccagcgcctggatgtgagggtgaagaaatgtac
aacaagcaagtggagatatggagacgctggattaagtgggaaaaagacgatcctctagta
ctgaaagatgaggatgctggtgctggctacaaggcccgagtgctttatgtttaccgacag
tcgttgatggccttgaggttcttgccagagatatggtttgatgctgcggagttctgtttc
caaaatggaatggagtctgaaggcaacgacttcttaaagcaaggaatagatgcaaatcca
gagagctgtttgcttgcatttaaactcgctgatcggcttgaagttaccacagaatctgag
caggactctaagaagcgtggtgccaaagtcagggaaccttatgacagactgcttgatgct
ttctacgacttaatttcgaaagccaaggctcaggaaattaaagatatagattttatcgaa
aaaagcttttcttctgacgcagacaagcctcagcggcaagtcatggtcatcaacaatgag
gaagacgatgagggagatgacgttgcaaaggcaagggaagcggcgaaaaatagtcagatc
gaggctttgaaaaagagacatgctgaagaaattggccagctgtcgaaggtcatatccttt
gcttggattgccctcatgagatctatgcgtcgcattcaggggaaaggcaaaccaggagaa
atggcagggtcgaggcaaatttttgctgatgcgcgcaaacgcgggcgcataactagcgat
gtctacatcgcgagtgcgttactggaacattattgctataaagaccctgccgcgacgaag
atattcgagcgcggcgcaaaactattccccgaggatgaaaacttcacactggaatatctt
aaacatctcattgacatcaacgacattatgaaccctgccctcaaacaattcccccaccgt
ttctccacgccaactttcgaccccactggcttccaaccaattctctccccttcccagacg
aaaccaaagctatcctctattactcccacggaagaagagatgcaatcacgccaggactcc
cctcccgcccgctacctcggagcgccggggccagctgcagggccaggaccgccatcaaca
acaacccactcccccaagcgcccctatgtgctcgatgaattggacgaagactcctcgaat
cgtccgcgtaagttcgtgcgagctgagtcgccactgaaaggcgcagcaggccggcggctg
aatcagcagaagcaacagattcaacaacaggtggtaaatggtagcggtggaggtggggga
ggtgggatgggtggtgcgtatggtggtggaggtcaagggaacaaaccacccatcccagtt
ccgctgccgagagaaatcatgttcctgctcagcattattccgggcgcatcgacgtacgat
gctacgaggttttcgccggagaagatggttatgctattgcgtcatttggaagttccttcg
tcggtgagtcagcttagaccgcctgttcccccgcttggggttgctggtagtactggggtg
gtggggggtttgaatcgtgggcagtatatgagtggctaccgccctggttcatag
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integrated database retrieval system
