Histoplasma mississippiense: HCAG_08835
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Entry
HCAG_08835 CDS
T02229
Name
(RefSeq) hypothetical protein
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
aje
Histoplasma mississippiense
Pathway
aje03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aje00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HCAG_08835
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aje03019
]
HCAG_08835
Messenger RNA biogenesis [BR:
aje03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
HCAG_08835
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
HCAG_08835
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
WKF
CLZ
EAD9
Mu-like_Pro
RPW8
Motif
Other DBs
NCBI-GeneID:
5442529
NCBI-ProteinID:
XP_001536171
UniProt:
A6RGR8
LinkDB
All DBs
AA seq
613 aa
AA seq
DB search
MTSRKTQQEIDKTFKKVAEGIQSFEGIYDKIKSSSNAAQRDKLEDNLKREIKKLQRFRDQ
IKTWAAGNEVKDKGPLLEQRRAIETCMEQFKAVEKEMKTKAYSKEGLSAAARLDPKEKEK
AETCDFLSSTVDILQQKIEAMEAEEEMIQASLKKGKKDAAKTTRLSDITRILERHRWHVT
KLELLLRCLQNGNVETSQVLDIKDSIKYFADDGHNADFCGEDETIYDDITLGDDEFGMPT
DNDRVSSQDTQSIQDDDAEAARSKAKAEPGPARRPSTQMKSPLPVLATLHNGPSSTASGS
MKPAPLPTRLPGETLKYASAAAAAAASDKSGVGIAPLPPPPGTTSSTASPQVHHVQPVQR
LASAAPSVDDSASQQQSKSPTLPSAPTSRPATVPPPPATDNVETVASDEHAAPTTNGEPK
ENATPAPAPALARAPAPASNDESVYHLPPGLQDLIQSFEITKSRVSVILSTSVQRLLTAS
HHTCPEPGDAEKPRHYKPQTPYNTPLYYPQEVLPIFDDPRLYETGRIDTDTLFYIFYYRQ
ASYQQYLAAKSLKNQSWRFHKQYQTWFQRHEEPKTITEEFEQGTYRFFDYESTWMNRRKA
DFKFVYKFLEDDL
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcgcgaaaaacacagcaggaaatcgacaagaccttcaagaaggtcgctgaaggc
atacaatcgttcgagggcatatacgacaagataaaatcatcgtcaaacgcggcacaaaga
gacaagctagaagacaaccttaaacgcgaaatcaaaaagcttcaacggttccgtgatcag
attaaaacatgggctgcaggaaatgaagtcaaggacaagggccctttgctagagcagcgg
agggccattgaaacttgcatggaacaattcaaagccgttgaaaaggaaatgaaaaccaag
gcctattcgaaggaaggtctatcagctgcagctcgattagaccccaaggaaaaagagaag
gctgaaacatgcgacttcctatcgtcaaccgttgatatcctacaacaaaagattgaggcc
atggaggctgaggaagagatgatacaggcatcgctaaagaagggaaagaaggatgctgca
aagactacccggttgtctgatattacaaggattctagagcggcaccgatggcatgtgaca
aagctggaactactcctgcggtgtcttcaaaatggaaatgttgagacaagccaagtgctg
gacatcaaagacagcatcaaatatttcgcggacgatggtcacaatgcagacttctgtggg
gaagatgaaacgatatacgacgacataacgctaggagatgacgagtttggtatgcccact
gataacgacagggtctcatctcaggatacgcaatcaatacaggatgatgatgcggaagcc
gcgaggtcaaaggcgaaagcagaacccgggccggcacgaaggccatcgacgcagatgaag
tcgcccctcccagttttggcgacacttcataacggaccctcatctacggcttcaggttct
atgaagcctgcccctctaccgacgcgattaccaggagagaccttgaaatatgcttctgca
gcagctgcggcagcagctagtgataaaagtggtgtgggaatagctcccttaccaccaccg
ccgggaacaacatcctcaaccgcctcaccgcaagtgcatcatgtacaacctgtgcagagg
cttgcatctgcagcccccagtgtggacgattccgctagccaacagcaatccaaatcgcca
acgttaccgagtgctcctacgagtagacctgcaacggtccccccacccccggccacggat
aatgtggaaaccgtggcgtcagatgagcatgcggcgcccacaacaaatggcgagcccaag
gaaaatgctaccccagctccagctccagctcttgcccgtgctccagctccagcgtcaaat
gatgaatccgtctaccacctcccccccggccttcaagacctaatccaatctttcgaaatc
accaaatccagagtctccgtcattctttcgacgtctgtccaacggctcctaacggcctcg
caccacacctgcccagaacccggagatgcagagaaaccccgccactacaaaccgcaaaca
ccttacaacacccctctttactacccgcaagaagtactgccaatattcgatgacccgcgg
ttatacgagacggggcgcatcgatacagacacgttgttctatatcttctattatcgacag
gcgagttaccagcagtatctggcagcgaaatcattgaagaatcagagctggcggttccat
aagcagtaccagacctggtttcagcggcatgaggagccaaagacgattacagaggagttt
gaacaggggacgtatcggttctttgattatgagagtacatggatgaaccggcgaaaagca
gacttcaaattcgtctacaaattccttgaagacgacttgtaa
DBGET
integrated database retrieval system