Histoplasma mississippiense: HCAG_09069
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Entry
HCAG_09069 CDS
T02229
Name
(RefSeq) similar to ATP dependent RNA helicase Dhh1
KO
K12614
ATP-dependent RNA helicase DDX6/DHH1 [EC:
5.6.2.7
]
Organism
aje
Histoplasma mississippiense
Pathway
aje03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aje00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HCAG_09069
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aje03019
]
HCAG_09069
03036 Chromosome and associated proteins [BR:
aje03036
]
HCAG_09069
Enzymes [BR:
aje01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
HCAG_09069
Messenger RNA biogenesis [BR:
aje03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
HCAG_09069
mRNA degradation factors
5'-3' decay
Decapping complex
HCAG_09069
Chromosome and associated proteins [BR:
aje03036
]
Eukaryotic type
Gene silencing
piRNA pathway
HCAG_09069
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
NA-iREase2
Motif
Other DBs
NCBI-GeneID:
5442346
NCBI-ProteinID:
XP_001535985
UniProt:
A6RHF2
LinkDB
All DBs
AA seq
457 aa
AA seq
DB search
MMGIFEAGFEKPSPIQEETIPVALTGRDILARAKNGTGKTAAFVIPTLERTNPKNSKTQA
LILVPTRELALQTSQVCKTLGKHLGINVMVTTGGTGLQDDIIRLNEAVHIIVGTPGRILD
LASKGVADLSECSTFVMDEADKLLSPEFTPVIEQLLSFHPKDRQVMLFSATFPMIVKSFK
DKHMRNPYEINLMDELTLRGITQYYAFVEEKQKVHCLNTLFSKLQINQSIIFCNSTNRVE
LLAKKITELGYSCFYSHAKMLQHNRNRVFHDFRNGVCRNLVCSDLLTRGIDIQAVNVVIN
FDFPKNAETYLHRIGRSGRFGHLGLAINLINWEDRYNLYKIEQELGTEIQPIPQSIDKKL
YVYDTPDTIPRPTSNVGHQQQQQQQQQQHQHTSAPPQHPNNPGNHNRRHGQHQYASNRGR
GSYRGGRGQGQRGGYGENHRQNCTVPRPSAAASAPAS
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgatgggtatttttgaggctggttttgagaagccctcccccatccaagaagaaactata
cccgtggccctcactgggcgggatatccttgcgcgcgcgaaaaacggaacaggaaagact
gctgcctttgttatcccgacgttagaacgaacgaatcccaaaaattccaaaacacaagcc
ctcatcctggtccctacaagagaactcgctcttcaaacatcgcaagtgtgcaagacactc
gggaaacatcttggtatcaatgttatggtcacgactggtggcacgggccttcaggatgat
attatacgcctgaatgaagcagttcacatcatcgttggcactcctgggagaatactggat
cttgctagtaaaggtgtggcagacttgtcagagtgttcgacttttgttatggacgaggcg
gacaagcttctctcacccgagttcaccccggttatcgaacagcttctgtcgttccatccc
aaggaccgtcaagtaatgcttttcagcgcaacattcccaatgatcgtcaaatctttcaag
gacaaacatatgaggaatccttacgagatcaacctcatggacgagcttacacttcggggc
atcacgcagtattatgcgttcgtcgaagaaaagcaaaaagtccactgtctgaatactctc
ttctccaaactccaaatcaatcaatctatcattttctgcaactctacaaaccgtgttgaa
ctactcgccaagaaaatcaccgaactggggtactcatgtttttattctcacgctaaaatg
ttacagcataaccgaaatcgtgtgttccacgacttccgtaacggcgtttgccgaaacctg
gtctgctcagacctgttgacacgcggcattgatattcaggcagtgaatgtcgtgatcaac
tttgatttccccaaaaatgcagaaacttatcttcaccgcataggtcgttcaggtcggttt
ggacacttgggtttggctattaacctaatcaactgggaggatcgatataacctgtataaa
attgaacaggagttgggcactgaaatccagccaatcccccaatccatcgacaaaaagctc
tatgtttacgacacacccgacaccatcccccgacccacttctaacgttggccaccagcag
cagcagcagcagcagcaacaacagcatcagcatacttccgcaccgccgcaacatcctaac
aatccaggaaatcacaatcgccgacatggccagcatcaatatgcttccaataggggccgt
ggatcttatcgtggcggccgtggccaaggacaacggggtggctatggagaaaatcatcgc
cagaactgcaccgtaccgcgaccaagcgcagccgcatctgcacccgcgtcgtaa
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