Histoplasma mississippiense: HCAG_09100
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Entry
HCAG_09100 CDS
T02229
Name
(RefSeq) hypothetical protein
KO
K14400
pre-mRNA cleavage complex 2 protein Pcf11
Organism
aje
Histoplasma mississippiense
Pathway
aje03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
aje00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
HCAG_09100
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aje03021
]
HCAG_09100
03019 Messenger RNA biogenesis [BR:
aje03019
]
HCAG_09100
Transcription machinery [BR:
aje03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
HCAG_09100
Messenger RNA biogenesis [BR:
aje03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
HCAG_09100
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pfc11_Clp1_ID
Zn_ribbon_ISL3
Motif
Other DBs
NCBI-GeneID:
5442321
NCBI-ProteinID:
XP_001535960
UniProt:
A6RHH7
LinkDB
All DBs
AA seq
398 aa
AA seq
DB search
LPTQEAQPYGQPLQDLIDLSALHRDIENLISTARTDFANNPLDPSLQQKLKALLDLQNIL
QQQKLPQDQLKLIRDQVSQLSPTPKPQLPPRVVPTPPVTQGPVQPIQSHTPQPNLQSLLN
PATIAELIKATANQQSRTPPPPPLPHIAPFLQPQASSTPPPPPHSTAPNLAENPLIASLR
ARGLLPPAAASAPPTPPNLPFILSGQSVYTPPAVISQLPNPLEVKINIQMTSASIRIPRP
NLISTLYEEKSNRCGTCGRRFYSDDQGKEKKARHLDWHFKTNQRMTEASKRGQSRSWYLD
EREWIKSREFDDDTGRPTGDSATFANGSMSDSTATAAKKSSQKQWIHAPNDAALRNAPCP
ICQRNSSRHGLRRRKIGSGMMLNRGTPDSVLGKRKAKV
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
cttccaactcaagaggcccagccatacggacaaccactccaagacttaattgatcttagc
gcattacatcgtgatatagaaaatctgatctcgaccgctcgaactgactttgcaaacaat
ccacttgacccctcacttcaacaaaagcttaaagcccttctagacctccagaacatcctg
cagcagcaaaagttaccccaagaccagctaaaactcattcgagatcaggtatctcagctt
tcaccaacgcccaaaccccagctgccccctcgagttgttccaactcctcccgtaacacag
ggaccagttcaaccaatacaaagccacacccctcagccaaaccttcaatctcttctaaat
ccagctacaattgccgagcttataaaggcgacagcgaaccagcaaagccgaacgccgccg
ccaccaccgctgccccatatcgcaccgtttctacagcctcaggctagcagcactccgcct
ccccccccacactctacagcacctaacctagcagagaatcccttgattgcttctcttaga
gctcgaggcctccttccacccgccgctgcttctgctccaccgacacctcccaatctacct
ttcattctctccggacaatcggtatatacgccacctgctgttatatcacaattacccaac
ccacttgaagtcaaaattaatatccaaatgacttcagcgtccatcaggatcccgaggccg
aacttaatttctaccctgtacgaagaaaagtcgaaccgatgtggtacatgcggtcgacgc
ttttattcggatgaccaaggaaaagagaaaaaagcaaggcatttggattggcacttcaaa
actaatcagcgcatgacggaagcatccaagcgtggacaaagtcgtagctggtatctggat
gaacgggaatggataaaatctcgagaatttgatgatgatactggccgtccaacaggcgac
agtgcaactttcgcgaacggatcgatgtcagattcgactgcgactgcggcaaagaaatcg
tcgcaaaagcaatggatccatgcacccaatgacgcagcgctacgcaatgctccatgccca
atatgccagagaaattcgagtcgacatggtctgaggaggcgcaagattggatctggcatg
atgctaaaccggggaactccagactctgtcttaggtaaacggaaagcaaaggtatga
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