Arthrobacter jiangjiafuii: KKR91_08655
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Entry
KKR91_08655 CDS
T07979
Name
(GenBank) ribonuclease J
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
ajg
Arthrobacter jiangjiafuii
Pathway
ajg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ajg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KKR91_08655
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ajg03019
]
KKR91_08655
Messenger RNA biogenesis [BR:
ajg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
KKR91_08655
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Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
Lactamase_B
Lactamase_B_2
RMMBL
RNase_J_C
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-ProteinID:
QWC11735
UniProt:
A0A975R190
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Position
1826744..1828372
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AA seq
542 aa
AA seq
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MRIVALGGIGEIGRNMTVFEFDGKLLIVDCGVLFPEEIHPGVNLILPDFSYIRDRLHDVV
GVVLTHGHEDHIGGIPYLLRERADIPLIGSKLTLAFIEAKLKEHRITPKLIQVKEGDRRT
MGGFDLEFVAVNHSIPDSLAVAIRTPAGMVLHTGDFKMDQFPLDRRITDLAGFARLGAEG
VDLFLTDSTNADVPGFMASEKELAPAIDQVFRTAPRRIIVSSFASHIHRIQQVIDAADRY
KRKVAFVGRSMIRNMTIAEELGYLNIPKGLLVDFKALQRSDDPKVVLICTGSQGEPLAAL
SRMANKDHPIRIQENDTVLLASSLIPGNENAIYGVINALTQLGANVVHKGNAKVHVSGHA
SAGELAYCYNIVKPRNVMPVHGEWRHLRANAAIAVATGMDPRDVVIAEDGVTVDLRRGRA
SISGKIPVGLVFVDGDSVGHTTEDDLKERLQLSEQGSVVVLALIDPDTNTVAEPPEFFIK
GFACSDSDVKKAEAVVEKAINDAASGRGRKEDPEAIIERATANWMRRFYNRTPAVTAIVV
DA
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atgcgcatcgttgcgctgggcggcattggcgaaatcggcaggaacatgaccgtcttcgaa
ttcgacggcaagctgctgatcgttgactgcggtgtgcttttccccgaggaaatccacccc
ggcgtcaacctgatcctgcccgacttctcctacatccgtgaccgcctgcacgacgtcgtg
ggcgtcgtactgacccacggccacgaggaccacatcggcggcattccctacctgctgcgc
gagcgtgcggacattcccctgatcggctccaagctgaccctggcgtttattgaagccaag
ctcaaggaacaccgcatcaccccgaagctgatccaggtcaaggaaggcgaccgccgcacc
atgggcggattcgacctcgaattcgtggccgtcaaccactccatccctgacagcctcgcc
gtcgccatccgcaccccggccggcatggtcctgcacaccggtgacttcaagatggaccag
ttcccgctggaccgccgcatcaccgacctggccggtttcgcccgccttggcgccgaaggc
gtggacctgttcctcaccgactccaccaacgccgacgttccgggcttcatggcttccgaa
aaggaacttgctcccgccatcgaccaggtgttccgcaccgcgccgcgccggatcatcgtc
tccagcttcgccagccacatccaccgcatccagcaggtcatcgacgccgccgaccgctac
aagcgcaaggttgccttcgtgggccggtcgatgatccggaacatgaccatcgccgaggaa
ctgggctacctgaatatccccaagggcctcctggtggacttcaaggcgctccagcgctcc
gatgatcccaaggtggtactgatctgcaccggttcgcagggcgagccgctggccgcgctg
tcccgcatggccaacaaggaccacccgatccgcatccaggaaaacgacaccgtgctgctg
gccagctcgctgatcccgggcaacgagaacgccatctacggcgtcatcaacgccctgacg
cagctgggcgccaacgtggtccacaagggcaacgccaaggtccatgtctccggccacgcc
agcgccggtgaactggcctactgctacaacatcgtcaagccgcgcaacgttatgccggtc
cacggcgaatggcgccatctgagggccaacgcagcgatcgccgtcgccacgggcatggac
ccgcgcgacgtcgtcattgcagaagacggcgtgaccgttgacctgcgccgcggccgggct
tcgatttccggcaagatccccgtgggcctggtcttcgtggacggcgacagcgtcggccac
accaccgaggatgacctcaaggagcgcctgcagctctccgaacagggctccgttgtggtc
ctggccctcatcgatccggacaccaacacggttgccgagccgccggagttcttcatcaag
ggcttcgcctgcagcgacagcgatgtcaagaaggccgaggccgtcgtcgaaaaggcgatc
aatgatgcagcgtccggccgcggccgcaaggaagaccccgaggccatcattgagcgcgcc
accgccaactggatgcgccgcttctacaaccgcaccccggctgtcaccgccattgttgtg
gatgcctaa
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