Arthrobacter jiangjiafuii: KKR91_10745
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Entry
KKR91_10745 CDS
T07979
Name
(GenBank) Rne/Rng family ribonuclease
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
ajg
Arthrobacter jiangjiafuii
Pathway
ajg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ajg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KKR91_10745
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ajg03019
]
KKR91_10745
03009 Ribosome biogenesis [BR:
ajg03009
]
KKR91_10745
Enzymes [BR:
ajg01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
KKR91_10745
Messenger RNA biogenesis [BR:
ajg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
KKR91_10745
Ribosome biogenesis [BR:
ajg03009
]
Prokaryotic type
rRNA processing factors
KKR91_10745
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
Motif
Other DBs
NCBI-ProteinID:
QWC09003
UniProt:
A0A975QZZ5
LinkDB
All DBs
Position
complement(2279886..2283449)
Genome browser
AA seq
1187 aa
AA seq
DB search
MSDALNNDDLTADLTANENTADSPAAAPAQAKEPVKRATRSRRKSVAASAPAAETEAAGT
VAAETETAAGSETAAEPVADAAEKPKRVRATRRKTVPAGEAAPAATSPGGKAEAAAQDPE
VAAPQAEAAPVEAAPEAEAPVKAVRRRRAPAKKAAETVETPAEAPAAETGALTGQGVDEE
VEAPAATAAPKTRARRRPKAAGQAPETAAADMPATEAAADDTVASAAAAQTPSAEGTAAA
EANAGTAAETSPLNPFTVPVLPLFHAPDLSTVRVASAPEAGGDADEDEDSSEANQGRRRS
RRGRNRARSDAPNTAAGENEQEAGSEEPAADAAAPEASESVTSRRRRRRRRGDADLELTG
GADDDPPNTVTRVRAPRAHADAPVSDRVTSVKGSTRLEAKKQRRRESRESGRRRHVITEA
EFLARRESVDRQMIVRQRDDRIQIGVLEDGVLAEHFVSNTQQDSLIGNVYVGKVQNVLPS
MEAAFVDIGRGRNAVLYAGEVNWDAAGLDGQPRRIELALKSGDSVLVQVTKDPVGHKGAR
LTSQISLPGRYLVYVPGGSMTGISRKLPDVERNRLKKILKDHLPQDAGVIVRTAAEGASE
EELMNDINRLRAQWATIEAKATSTKTLAPELLYGEPDLTIKVVRDVFNEDFSKLIVSGEE
AWDTIEAYVTYVAPDLVGRLEKWTKDEDIFAASRIDEQIAKALDRKVFLPSGGSLVIDRT
EAMTVVDVNTGKFTGSGGNLEETVTKNNLEAAEEVVRQLRLRDIGGIIVIDFIDMVLEAN
RDLVLRRLVECLGRDRTKHQVAEVTSLGLVQMTRKRMGTGLLEVFGETCEHCDGRGVVTQ
DVPVEHRRSTSHNGGTGHSGSTGHSVVAHAVSEDNHQQHLKQEKQSRGDRKRRSRGQGAP
QQGAAAVAEEPAKTEERGQDDAERQAKAEAARAALATIAAATAAAHDAAEAGEKAPERTG
STPAAAATAATAQSGETGAVLRIQGETVVVPRRERREPVGEKSRFTLESLTEAFNEVAGA
APGNQPAADAEPTAAVVEAPEQQASGRPARRSRRSSAAARNVQAPASSAAEPAPAREQAA
PKAAAPERAVAPKAAAPAQPASAPAAAPKAAGPARTPRRRRAAGSPQGAAGADAIQAAGA
NGAPAPAVPVAVRHTAAPAVAQKQEKRRESTGAAPVILGVGVPASEL
NT seq
3564 nt
NT seq
+upstream
nt +downstream
nt
atgagtgatgcactgaataatgacgacctaacagctgacctgactgccaacgaaaacacc
gcggattccccggcggcagcgccggcccaggcgaaggagccagtcaaacgcgccacccgc
agccgccgcaagtcggtggctgcttctgcacccgctgctgaaactgaagccgcaggaacg
gtcgctgctgaaactgaaaccgctgcaggcagtgaaacagcggcggaacccgtagctgac
gctgcggagaagcccaagcgggtccgtgccacacgccgcaagacggttcccgccggcgaa
gccgctccggcggccacgtcaccgggcgggaaggccgaagccgccgcccaggatcccgag
gttgccgcaccgcaggccgaggccgcgccggtagaggcagcccccgaggccgaggcaccg
gtgaaagccgtgcgccgtcgccgcgcccctgccaagaaggcagcggaaacagtggaaacc
cccgccgaagctcccgcggcagaaaccggcgctctgaccggtcagggcgtagacgaagaa
gtggaagcaccggcagccacggcggctccgaagacgcgggcccgccgtcgtccgaaggca
gccgggcaggccccggaaaccgctgccgctgacatgccagccactgaggcagccgcagac
gacaccgttgcctccgccgcagccgcacagactccctcggctgaggggacggcggcagcc
gaagccaacgccgggactgcagccgaaacctcaccgctgaacccgtttaccgttcccgta
ctgccgctgttccacgcgccggacctgagcaccgtccgcgttgcctccgcgcctgaagcc
ggcggggacgccgatgaggatgaggattcctccgaggcaaaccagggccgtcgccgcagc
cgccgcggccgcaaccgcgcccgcagcgatgccccgaataccgcagccggcgaaaacgaa
caggaagccggctctgaggaaccggcagctgacgcagccgcacccgaagcctccgagagc
gtgacctcgcgccgtcgtcgtcgccgccgccgtggtgacgccgacctggaactgaccggt
ggcgccgacgatgatccgcccaacaccgtgacccgggtccgggccccgcgtgcccacgcc
gatgcgccggtctcggaccgcgtcaccagcgtcaagggctccacccgcctggaagccaag
aagcagcgccgccgcgaatcccgcgagtcgggccgccgccgccatgtaatcaccgaggct
gagttcctggcccgccgcgaatccgtggaccggcagatgattgtccgccagcgcgacgac
aggatccagatcggcgtgctggaagacggcgtgctggctgagcacttcgtctccaacacg
cagcaggattccctgatcggcaacgtttacgtgggcaaggtccagaacgtgctgccgagc
atggaagccgccttcgttgacattggacgcggacgcaacgccgtgctgtacgccggtgaa
gtcaattgggacgccgccggtctggatggccagccgcgccgtatcgaactggccctgaag
tccggtgactccgtcctggtgcaggtcaccaaggacccggtgggccacaagggtgcccgc
ctcaccagccagatctcgctgccgggccgctacctggtctacgtgccgggcggttccatg
accggcatctcccgcaagctgcccgacgtcgaacgcaaccggctcaagaagatcctcaag
gaccacctgccccaggacgccggtgtgattgtgcgcacggctgccgagggtgcctccgaa
gaggagctgatgaatgacatcaaccggctgcgggcgcagtgggccaccatcgaggccaag
gccacgtcgaccaagacgctggcaccggagctgctgtacggcgagccggacctgaccatc
aaggtggtccgcgacgtcttcaacgaggacttctccaagctcatcgtctccggcgaggaa
gcctgggacaccatcgaggcctatgtcacctatgtggctcccgacctggtcggccgcctc
gagaagtggaccaaggacgaggatattttcgcagccagccgcatcgacgagcagatcgcc
aaggcgctggaccgcaaggtcttcctaccctcgggcggctcgctggtcattgaccgcacc
gaagccatgaccgtggtggacgtgaacaccggcaagttcaccggtagcggcggcaacctc
gaagagacagtcaccaagaacaacctcgaagcagccgaagaagtggtccgccagctgcgc
ctgcgggacattggcggcatcatcgtcatcgacttcatcgacatggtcctggaggccaac
cgcgacctggtcctgcgccgtctcgtggagtgcctgggccgcgaccggaccaagcaccag
gtcgccgaggtgacctccctggggttggtccagatgacccgcaagcggatgggaacaggc
ctgctggaagtattcggcgaaacctgcgagcactgcgacggccgcggcgtggtcacccag
gacgttccggtggagcaccgccgcagcaccagccacaacggcggcaccggccattccggt
tccaccggacacagtgtggttgcccacgcggtgtccgaggacaaccaccagcagcacctg
aagcaggagaagcagtcccgcggcgaccgcaaacgccgcagccggggtcagggtgctccc
cagcagggagctgccgcagtagcggaggaaccggccaagacagaggagcgcggacaggac
gacgccgagcggcaggccaaggccgaagcggcccgggcagcgctggcgacaatcgcagcg
gcaactgccgccgcgcacgacgccgccgaagcgggggagaaggccccggaacggaccggt
tccactccggcggcagctgccacggctgccacagcacagtcgggcgagaccggtgccgtc
ctgcggatccagggcgaaaccgtggtggttccgcgccgggagcggcgcgagccggtcggg
gaaaaatcccgcttcacgctggagagcctcacggaggccttcaacgaagttgccggcgca
gcacccggaaaccagcctgccgcggatgctgagcccacggcggcagtcgttgaggccccg
gagcagcaggccagcggacgcccggcccgacgctcgcgccgcagcagcgctgcagcccgg
aacgtacaggcgccggcatcatcggcggcggaacctgcccccgccagggagcaggcagcc
ccgaaggcggcagcacccgaacgggctgtggcaccgaaggcggcagcacccgctcagcct
gcatccgccccggccgccgcaccgaaggccgcaggaccggcgcgcaccccgcgccgccgt
cgtgctgccggcagcccccagggagccgcgggagccgatgccatccaggccgccggcgcc
aacggagccccggccccggccgtacccgttgccgtccgtcatactgccgctccggcagtt
gcgcagaagcaggagaagcgccgggaatccaccggcgccgcccctgtgatcctgggcgtt
ggagtgccggcttccgagctctga
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