Arthrobacter jiangjiafuii: KKR91_13560
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Entry
KKR91_13560 CDS
T07979
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
ajg
Arthrobacter jiangjiafuii
Pathway
ajg03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ajg00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
KKR91_13560
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ajg03021
]
KKR91_13560
03400 DNA repair and recombination proteins [BR:
ajg03400
]
KKR91_13560
Enzymes [BR:
ajg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
KKR91_13560
Transcription machinery [BR:
ajg03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
KKR91_13560
DNA repair and recombination proteins [BR:
ajg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
KKR91_13560
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
DUF1843
PMD1-like
DUF4407
Motif
Other DBs
NCBI-ProteinID:
QWC09496
UniProt:
A0A975M3W6
LinkDB
All DBs
Position
complement(2892792..2896682)
Genome browser
AA seq
1296 aa
AA seq
DB search
MSNDSTFGLMRIGLATADEIRGWSYGEVKKPETINYRTLKPEKDGLFCEKIFGPSRDWEC
YCGKYKRVRFKGIICERCGVEVTRAKVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDL
APKDLEKVIYFAAYMITSVDEENRHAELPNLQAEHDLERKHLVDQRDSDIAAIAKDLEGE
IARLEGEGAKAADKKKARDSADRQMAKVRRDADNNIERLEQVWDRFKNLKVGDLEGDEGL
YRELRDRYGLYFEGSMGAEAIKQRLMDFDMQAESELLRDIIQNGKGQRKTRALKRLKVVN
AFLTTTNSPLGMVLDAVPVIPPELRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDL
GAPEIIVNNEKRMLQEAVDSLFDNGRRGRPVTGPGNRPLKSLSDMLKGKQGRFRQNLLGK
RVDYSGRSVIVVGPQLKLHQCGLPKQMALELFKPFVMKRLVDLNHAQNIKSAKRMVERFR
PQVWDVLEEIITEHPVLLNRAPTLHRLGIQAFEPQLVEGKALQLHPLVCGAFNADFDGDQ
MAVHLPLSPEAQAEARILMLSSNNILKPSDGRPVTLPSQDMIIGLHHLTTKKEGVAGEGR
FFTSPSEALMAYDLGELDLNAQISMRLDGFVPSEDRPAPEGWVEGTPALIQTSLGQVIFN
QTLPADYPWVEKVADKGQLSTIVNDLAERYPKVMTAATLDNLKDAGFYWATRSGVTVAIS
DISAPIDKPAIMEVYEAQAAKVEVQYGKGLIAEDERRQELIDIWNKATNEVAAAMRANMP
KENNINRMVSSGARGNWLQVRQIAGIRGLVANPKGEIIPRPIKSSYREGLSVLEYFIATH
GARKGLADTALRTANSGYLTRRLVDVSQDVIVREEDCGTERGLNVTIAVPDSNGELQLHE
EVENSAYARTLATDVSDAQGNVLAKGGDDVGDVLIAKLFEAGVTDIKVRSVLTCESAVGT
CALCYGRSLATGKTVDIGEAVGIIAAQSIGEPGTQLTMRTFHTGGVASAEDITQGLPRIQ
ELFEARTPKGVAPISETAGRVTLEESDRQMRLVVTPDDGSEEIAYPVLRRARLLVADGDH
VEVGQQLVFGAVDPKQILRILGPRKAQEFLVDEVQRVYRSQGVGIHDKHVEVIVRQMLRR
VTVIESGDSDLLPGELAERRRFENENRRVVSEGKKPASGRPELMGITKASLATESWLSAA
SFQETTRVLTQAAMEGKSDPLLGLKENVIIGKLIPAGTGLPRYTEVTVEPTEEAKANLFT
GPSAFSDFDYAGVDGGLSPEFHAIPLDDYDMGSDFR
NT seq
3891 nt
NT seq
+upstream
nt +downstream
nt
atgtccaacgattccacgttcggccttatgcgaatcggccttgccactgcggatgaaatc
cgcggttggtcttacggcgaggtcaagaagccggaaaccatcaactaccgaaccctgaag
ccggagaaggacggtcttttctgcgaaaagatcttcggtccttcccgcgactgggaatgc
tactgcggtaagtacaagcgcgtgcgcttcaagggcatcatctgtgagcgctgcggcgtc
gaggtcacccgtgccaaggtgcgccgcgagcgcatgggccacattgagctcgccgctccg
gtaacccacatctggtacttcaagggtgttccgtcgcgtctgggctacctgctggacctg
gcgccgaaggaccttgagaaggtcatttacttcgctgcctacatgatcacctcggtggac
gaagagaaccgccacgccgaactgccgaacctgcaggccgagcacgacctggagcgcaag
cacctcgtcgaccagcgcgactccgacattgccgccatcgccaaggatctcgagggcgag
attgcccgcctcgagggcgaaggtgccaaggcagccgacaagaagaaggcgcgcgactcc
gccgaccgccagatggccaaggtccgccgcgacgccgacaacaacatcgagcgcctcgag
caggtctgggaccgcttcaagaacctcaaggtcggcgacctcgagggcgacgaaggcctg
taccgcgaactgcgtgaccgctacggcctgtacttcgagggctccatgggtgccgaagcc
atcaagcagcgcctgatggacttcgacatgcaggctgagtccgagctgctgcgcgacatc
atccagaacggcaagggccagcgcaagacgcgtgccctgaagcgcctgaaggttgtcaac
gcattcctgaccacgaccaacagcccgctgggcatggtcctggacgccgtgccggtcatc
ccgccggaactgcgcccgatggtccagctcgacggcggccgtttcgcgacgtccgacctc
aacgacctgtaccgccgcgtgatcaaccgcaacaaccgcctgaagcgcctgctggatctc
ggtgcccccgagatcatcgtgaacaacgaaaagcgcatgctccaggaagctgttgactcc
ctgttcgacaacggccgccgcggccgtccggtcaccggaccgggcaaccgcccgctgaag
tcgctctccgacatgctcaagggcaagcagggacgtttccgccagaaccttctgggtaag
cgcgttgactactccggccgttcggtcatcgtcgtcggcccgcagctgaagctgcaccag
tgtggtctgcccaagcagatggccctggagctcttcaagccgttcgtgatgaagcgcctg
gttgacctcaaccacgcacagaacatcaagagcgccaagcgcatggtcgagcgtttccgc
ccgcaggtctgggacgtactggaagagatcatcaccgaacacccggtgctgctcaaccgt
gcacccaccctgcaccgcctaggtatccaggcattcgagccgcagctggttgaaggcaag
gcccttcagctgcacccgctcgtctgtggcgcattcaacgccgacttcgacggtgaccag
atggcagtgcacctgccgctgagcccggaggcccaggccgaggcacgcatcctgatgctg
tcctcgaacaacatcctgaagccctcggacggccgtccggtgaccctgccctcgcaggat
atgatcatcggcctgcaccacctcaccaccaagaaggaaggcgtggcaggcgaaggacgt
ttcttcacctcaccgtctgaagccttgatggcgtacgacctcggtgagctggacctgaac
gcccagatcagcatgcgcctggatggcttcgtgccctccgaagaccgtccggcaccggaa
ggctgggttgaaggcactcctgccctcatccagacctccctgggccaggtcatcttcaac
cagaccctgccggcggattacccgtgggttgagaaggttgcagacaagggccagctgtcc
accatcgtgaacgacttggctgagcgctacccgaaggtgatgacggcggcaacgctggat
aacctgaaggacgccggtttctactgggccacccgctcgggcgttaccgttgccatctcc
gatatctccgcgccgatcgacaagccggccatcatggaggtttacgaagcacaggcagcc
aaggttgaggttcagtacggcaagggcctgatcgccgaagacgagcgccgccaggagctc
atcgacatttggaacaaggcaaccaacgaagttgctgcggccatgcgtgcgaacatgccc
aaggaaaacaacatcaaccgcatggtgtcttccggtgcccgtggtaactggctgcaggtc
cggcagattgccggtatccgtggcctggtggccaacccgaagggcgagatcatcccccgc
ccgatcaagtcctcgtaccgcgagggcctgtcggtgctggagtacttcatcgccacccac
ggtgcccgtaagggtctggccgataccgctctgcgtaccgccaactcgggttacctgacc
cgtcgtctggtagacgtttcccaggacgtcatcgtccgcgaggaagactgcggcaccgag
cgcggcctgaacgtcaccatcgcggttccggactccaacggcgaactgcagctgcacgaa
gaggtcgagaactcggcgtacgcacgtacgctggccaccgacgtctccgatgcccagggc
aatgtcctggccaagggcggcgacgatgtgggcgacgtcctcatcgccaagctgttcgaa
gccggcgttaccgacatcaaggtccgctccgtactcacctgtgagtccgccgtcggtacc
tgtgcactgtgctacggccgctccctggccacgggtaagaccgtggacatcggcgaggcc
gtgggcatcatcgccgcacagtccattggtgagccgggtacccagctgaccatgcgtacc
ttccacaccggtggtgttgcttccgcggaagatatcacccagggtctgccccgtatccag
gagctcttcgaagcacgtacccccaagggtgttgctccgatctccgagaccgcgggccgg
gtcacgttggaagagtccgaccgccagatgcgtctggttgtcactcccgacgacggctcc
gaggaaatcgcgtacccggtcctgcgccgtgcacgcctcctggttgccgacggcgaccac
gtcgaggttggccagcagctggtcttcggtgcggtggatcccaagcagatcctccgtatc
ctcggcccgcgcaaggcacaggaattcctggtggacgaagtccagcgcgtgtaccgcagc
cagggtgtaggcatccacgacaagcacgtggaagtcatcgtccggcagatgctgcggcgc
gtgaccgtgatcgaatccggcgattcggatctcctcccgggtgagctggccgagcgccgc
cgcttcgagaacgagaaccgccgcgtggtttccgagggcaagaagccggcctcaggccgt
cccgagctcatgggtatcaccaaggcgtcgctggcaaccgagtcctggctgtccgcagct
tccttccaggaaaccacccgcgtcctgacgcaggcggccatggaaggcaagagcgatccg
ctgctcggcctcaaggagaacgtcatcatcggtaagctgatcccggccggaacgggcctg
ccccgttacaccgaggtcactgtcgagccgaccgaggaagcaaaggccaacctgttcacc
ggcccgagcgccttcagcgacttcgactacgccggcgttgacggcggtctgagccccgag
ttccacgccatcccgctggatgactacgacatgggcagcgacttccgctaa
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