Arthrobacter jiangjiafuii: KKR91_13780
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Entry
KKR91_13780 CDS
T07979
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
ajg
Arthrobacter jiangjiafuii
Pathway
ajg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ajg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KKR91_13780
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ajg03019
]
KKR91_13780
03009 Ribosome biogenesis [BR:
ajg03009
]
KKR91_13780
Enzymes [BR:
ajg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
KKR91_13780
Messenger RNA biogenesis [BR:
ajg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
KKR91_13780
Ribosome biogenesis [BR:
ajg03009
]
Prokaryotic type
rRNA helicases
KKR91_13780
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
HEM4
UvrA_inter
Motif
Other DBs
NCBI-ProteinID:
QWC09535
UniProt:
A0A975M401
LinkDB
All DBs
Position
complement(2935922..2937850)
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AA seq
642 aa
AA seq
DB search
MLDSVENTETAETAAPEAVEENQVLFSDFGLDPRVLQALVDVGYEKPSPIQAATIPLLLE
GRDVVGLAQTGTGKTAAFAVPALSLMAGLPATKDTQILVLAPTRELALQSAEAFASYAKH
MDNFTVLPVYGGSAYGPQLAGLRRGAQVVVGTPGRVIDHISKGSLDLSNLQYLVLDEADE
MLRMGFAEDVEQILSTTPADKQVALFSATMPGAIRKIAKKYLNNPAEITVKSKTTTGANT
RQRYVQVMGPHKLDAMTRILESEDYDGVIAFVRTKMATEDLADKLKARGYLAAAINGDIP
QQQRERTVEALRSGKIDILVATDVAARGLDVERISHVINYDIPHDTESYVHRIGRTGRAG
RTGDAILFMTPREKYLLRAIEKATRQPVEHMQLPSIDIVNNKRLAKFSEQITETLASEDV
SVFRDLVTTYLADHDVTAEEVAAALAVMAQGGRPLLMEEIPQAPARQRERSEGRGDATGS
RGPTRPLTEGNATYRIAVGRRQRVMPGSIVGAIANEGGLSSAQIGGIDIRADHTLVELPA
DLSQDQLRALSRTRIGGELIHLELDNGRKPARERESGGFNDRGDRGGFKKDFKKRDGERS
FGDRSASDRGSDRGGFKKREGDRGGFKPAGTAGGARKPRFRD
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
ttgcttgactctgtagaaaacaccgaaaccgcagaaaccgccgctcccgaagcagtcgaa
gagaaccaggttctcttcagcgacttcggtctggacccgcgcgttctgcaggccctggta
gacgtaggctacgaaaagccgtctccgatccaggcagccaccatccctctcctgctcgaa
ggccgcgacgtcgtcggcctggcgcagaccggtaccggcaagaccgccgcgttcgccgtg
cccgccctgtccctgatggccggcctgcccgccaccaaggacacccagatcctggtactg
gcaccgacccgcgaactggccctccagtccgctgaagccttcgcttcctacgccaagcac
atggacaacttcaccgtcctgcccgtttacggcggatccgcttacggcccccagctggcc
ggcctgcgccgcggcgcccaggttgttgtcggtacccccggccgcgtcatcgaccacatc
tccaagggttccctggacctgtcgaacctgcagtacctggttctggacgaggccgacgaa
atgctccgcatgggcttcgccgaagacgttgagcagatcctgtcgaccacgcccgccgac
aagcaggtggcactgttctccgccaccatgcccggcgcaatccgcaagatcgccaagaag
tacctgaacaacccggcggaaatcacggtcaagtccaagacgaccaccggtgcgaacacc
cgccagcgctacgtgcaggtcatgggcccgcacaagctggacgcgatgacccgcatcctg
gaaagcgaagattacgacggcgttatcgccttcgtccgcaccaagatggctaccgaggac
ctggctgacaagctcaaggcccgcggctacctggcagcagcaatcaacggtgacatcccg
cagcagcagcgcgagcgcaccgtcgaggccctgcgcagcggcaagatcgacatcctggtt
gccaccgatgtcgccgcccgcggtcttgacgttgagcgcatcagccacgtcatcaactac
gacatcccgcacgacacggagtcctacgtccaccgcatcggccgcaccggccgcgcagga
cgcaccggcgacgcgatcctcttcatgaccccgcgtgagaagtacctgctgcgggccatc
gaaaaggccacccgccagccggttgagcacatgcagcttccgagcatcgacatcgtgaac
aacaagcgcctggcgaagttctccgagcagatcaccgaaaccctggcatccgaggatgtc
tcggtcttccgcgacctggtcacgacctacctggccgaccacgacgtcaccgccgaggaa
gtcgccgcagcactggccgtcatggcccagggcggccgcccgctgctgatggaagaaatt
ccgcaggcaccggcccgccagcgcgagcgctccgaaggccgcggcgacgcgaccggatcc
cgcggcccgacacgcccgctgaccgaaggcaatgcaacgtaccgcatcgccgtcggccgc
cgccagcgcgtcatgcccggctccatcgttggcgccattgccaacgaaggcggactctcc
tccgcacagatcggcggcatcgacatccgcgccgaccacacgctggttgaactcccggct
gacctcagccaggaccagctgcgcgccctgtcccgcacccggatcggcggcgagctgatc
cacctcgagctggacaacggccgcaagccggcccgcgaacgcgaaagcggcggcttcaat
gaccgcggcgaccgcggcggcttcaagaaggatttcaagaagcgcgacggcgagcgttcc
ttcggtgaccgcagtgccagcgaccgcggcagcgaccgtggcggcttcaagaagcgcgaa
ggcgaccgtggcggcttcaagcccgcaggcaccgccggcggcgcacgcaagccccgcttc
cgcgactaa
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