Acidipropionibacterium jensenii: C0Z10_02980
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Entry
C0Z10_02980 CDS
T05836
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
aji
Acidipropionibacterium jensenii
Pathway
aji03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
aji00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
C0Z10_02980
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aji03021
]
C0Z10_02980
03400 DNA repair and recombination proteins [BR:
aji03400
]
C0Z10_02980
Enzymes [BR:
aji01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
C0Z10_02980
Transcription machinery [BR:
aji03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
C0Z10_02980
DNA repair and recombination proteins [BR:
aji03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
C0Z10_02980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-ProteinID:
AZZ38876
UniProt:
A0A3Q9UHG5
LinkDB
All DBs
Position
665865..669743
Genome browser
AA seq
1292 aa
AA seq
DB search
MLDTNYYDRLQIGLATADQIREWSHGEVKKPETINYRTLKPERDGLFCEKIFGPTRDWEC
YCGKYKRVRFKGIICERCGVEVTRSNVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDI
APKDLEKVIYFAAYMITSVDDEARHRDLPSLEAKIQAERDHLTRRRDNELEARRTKLEED
LAQLEAEGAKADTRRKVKDGGEKEIRQIDHRAQRQLDRLDAVWDRFKSLKVQDLEGDEVL
YREMKNRFSKYFEGFMGAEAVKRRLQDFDLAAESETLRDIIKNGKGQKKTRALKRLKVVQ
AFLESGNSPVGMVLDAVPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDL
GAPEIIVNNEKRMLQEAVDSLFDNGRRGRPVSGPGNRPLKSLSDMLKGKQGRFRQNLLGK
RVDYSGRSVIVVGPQLKMHQCGLPKAMALELFKPFVMKRLADLEHAQNVKSAKRMVERQR
PVVWDVLEEVIKEHPVLLNRAPTLHRLGIQAFEPQLIEGKAIQLHPLVCSAFNADFDGDQ
MAVHLPLSAEAQAEARILMLSTNNILKPADGRPVALPSHEMIIGAYYLTMALDGLKGEGK
AFSSVAEAIMAHDLGELEIGAKIKLRLHDITPPHGEAVRADGSVILNTTLGQALFNEALP
KDYPYVDYLVGKKQIGKIVNDLAEDRSQLDVAVILDRLKDVGFRWGSLSGVTVSIGDVQT
PPTKPQILAGYESRADKVDREYERGAVTEDERRQDLIQIWTEATAELTKAMEANFTQTNP
IYMMVHSGARGNMTQMRQIAAMRGLVADPKGEIIARPIKSNFREGLTVLEYFISTHGGRK
GQADTALRTADSGYLTRRLVDVSQDVIVREEDCGTTRGMPKTIAVDDGKGTLVPVGDLET
SVYSRCLAADAVDADGTVVVAANSDLGDAEITELIKHGISQIKVRSVLTCAAPQGCCARC
YGRSLSTGNLVDVGEAVGIIAAQSIGEPGTQLTMRTFHTGGVAGDDITQGLPRVVELFEA
RTPKGKSAIAEAAGVIRLDDSESRRKLILVRDDGEEDVEYPLPRRARLEFDADGKHFVMR
DGTQVEAGQQLMGGTLDPQDVLRVLGVRKVEEHLVSEVQKVYNTQGAGIHEKHIEIVIRQ
MLRRVTVIESGDTPMMPGELVDRPHYEAANRKAVSEGGRPAEGRPVLMGITKASLATDSW
LSAASFQETTKVLTDAAINGKTDTLVGLKENVILGKLIPAGTGLERYRNLRVEPTAEAKA
AAFTMNYDPFDYDFGSSSSAVPLDDLDFGDMD
NT seq
3879 nt
NT seq
+upstream
nt +downstream
nt
gtgctggacaccaactactacgacagactgcagatcggcctggccaccgcagatcagatc
cgtgagtggagccacggcgaggtcaagaagcctgagacgatcaactaccgcaccctgaag
ccggagcgcgacgggctgttctgcgagaagatcttcggaccgacccgcgactgggagtgc
tactgcggcaagtacaagcgggtgcgcttcaagggcatcatctgcgagcgctgcggcgtc
gaggtcacccggtccaacgtccgccgcgagcggatgggccacatcgagctggccgccccg
gtcacccacatctggtacttcaagggtgtcccctcgcgtctgggctacctgctggacatc
gccccgaaggacctcgagaaggtcatctacttcgcggcctacatgatcacctcggtcgac
gacgaggcgcgccaccgcgatctgccctccctggaggccaagatccaggccgagcgcgat
cacctcacccggcgccgggacaacgagctggaggcccgacggaccaagctcgaggaggat
ctggcccagttggaggccgagggcgccaaggccgacacccgccgcaaggtcaaggacggc
ggggagaaggagatccgccagatcgaccaccgcgcccagcgtcagctggaccgcctggat
gcggtctgggaccggttcaagagcctcaaggttcaggacctcgagggcgacgaggtgctc
taccgggagatgaagaaccggttcagcaagtacttcgaggggttcatgggggccgaggcc
gtcaagcgccgcctccaggacttcgacctggccgccgagtccgagaccctgcgcgacatc
atcaagaacggcaagggtcagaagaagacccgcgccctcaagcgcctcaaggtcgtccag
gccttcctggagtcgggcaactcgccggtcggcatggtgctggacgccgtcccggtcatc
cctccggacctgcgcccgatggtgcagctggacggcggacggttcgccacctccgacctc
aacgacctgtaccgccgcgtcatcaaccgcaacaaccggttgaagaggctgctggacctg
ggcgccccggagatcatcgtcaacaacgagaagcggatgctccaggaggccgtcgactcc
ctgttcgacaacggtcgccgtggccgtccggtctctggaccgggcaaccgcccgctgaag
tcgctgtccgacatgctcaagggcaagcagggccggttccgccagaacctgctcggcaag
cgcgtcgactactccggccgttcggtcatcgtggtcggcccgcagctcaagatgcaccag
tgcggtctgcccaaggcgatggccctggagctgttcaagcccttcgtgatgaagcggctg
gccgatctggagcacgcccagaacgtcaagtccgccaagcggatggtggaacgtcagcgt
ccggtggtctgggatgtcctcgaggaggtcatcaaggagcacccggtgctgctgaaccgc
gcacccaccctgcaccgactgggcatccaggccttcgagcctcagctcatcgagggcaag
gccatccagctccacccgctggtctgctcggccttcaacgccgacttcgacggcgaccag
atggcagtccacctgccgctgagcgccgaggcccaggccgaggcccggatcctgatgctg
tcgaccaacaacatcctcaagccggctgacggccgtccggtcgccctgcccagccacgag
atgatcatcggcgcctactacctcacgatggccctggacgggctcaagggtgaggggaag
gccttctcctcggtcgccgaggcgatcatggcccacgacctgggcgagctggagatcggc
gccaagatcaagctgcgtctgcacgacatcaccccgccgcacggcgaggcggtgcgcgcc
gacgggtcggtcattctcaacaccacgctgggacaggctctgttcaacgaggcgctgccg
aaggactacccctacgtggactacctggtcggcaagaagcagatcggcaagatcgtcaac
gacctggccgaggaccgctcgcagctggatgtcgcggtgatcctcgaccggctcaaggac
gtcggcttccgctggggttcgctgtcgggcgtcacggtgtccatcggcgatgtgcagacc
ccgcccaccaagccgcagatcctggccggctacgagtcccgcgccgacaaggtcgaccgc
gagtacgagcgcggtgcggtcaccgaggacgagcgtcgtcaggacctcatccagatctgg
accgaggccaccgccgagctcaccaaggcgatggaggcgaacttcacccagaccaacccg
atctacatgatggtgcactcgggcgcacgagggaatatgacccagatgcgtcagatcgcc
gccatgcgaggtctggtggccgacccgaagggcgagatcatcgcccgacccatcaagtca
aacttccgtgagggcctgacggtcctggagtacttcatctccacccacggcggtcgaaag
ggtcaggccgacaccgctctgcgtaccgccgactccggctacctcacccgtcgtctggtc
gacgtctcccaggacgtcatcgtccgcgaggaggactgcgggaccacccgcgggatgccg
aagaccatcgcggtcgacgacggcaagggcacgctggtcccggtcggcgatctggagacc
tcggtctactcgaggtgcctggccgccgatgcggtggacgccgacggcacggtcgtggtc
gcggcgaactccgacctcggcgacgccgagatcaccgagctcatcaagcacgggatcagc
cagatcaaggtgcgctcggtgctcacctgcgcggctccccaggggtgctgcgcccggtgc
tacggacgatccctgtcgaccggaaatctggtcgacgtcggcgaggcggtcggtatcatc
gccgcccagtcgatcggcgagcccggcacccagctgacgatgcgtaccttccacaccggt
ggtgtggccggcgacgacatcacccagggacttccccgcgtggtcgagctcttcgaggcc
cgtaccccgaagggcaagtccgcgatcgcggaggcggccggtgtcatcaggctcgacgac
tccgagtcgcggcgcaagctgatcctggtccgtgacgacggcgaggaggatgtcgagtac
ccgctgcccaggcgggcccgtctggagttcgacgccgacggcaagcacttcgtgatgcgc
gacggcacgcaggtggaggccggccagcagttgatgggcggcaccctcgacccgcaggac
gtgcttcgcgtcctcggcgtgcgcaaggtggaggagcatctcgtctccgaggtccagaag
gtgtacaacacccagggcgccggtatccacgagaagcacatcgagatcgtcatccggcag
atgctgcgcagggtcacggtcatcgagtccggcgacaccccgatgatgcccggcgagctg
gtggaccgtccgcactacgaggcggccaaccgcaaggcggtctcggagggcggtcgtccc
gccgagggccgtccggtcctgatgggcatcacgaaggcctccctggccaccgactcgtgg
ctgtcggcggcctccttccaggagaccaccaaggtcctcaccgatgcggcgatcaacggc
aagaccgacaccctggtcggtctcaaggagaacgtcatcctcggcaagctgatccccgcc
ggcaccggtctggagcgctaccgcaacctgcgcgtggagcccaccgccgaggccaaggca
gccgccttcacgatgaactacgacccgttcgactacgacttcgggtccagctcatcggcg
gtaccgctggatgatctcgatttcggcgacatggactga
DBGET
integrated database retrieval system
