KEGG   Acidipropionibacterium jensenii: C0Z10_04795
Entry
C0Z10_04795       CDS       T05836                                 
Name
(GenBank) ribonuclease J
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
aji  Acidipropionibacterium jensenii
Pathway
aji03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:aji00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    C0Z10_04795
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:aji03019]
    C0Z10_04795
Messenger RNA biogenesis [BR:aji03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     C0Z10_04795
SSDB
Motif
Pfam: RNase_J_b_CASP RNase_J_C Lactamase_B Lactamase_B_2 RMMBL Anti-Pycsar_Apyc1 UL11
Other DBs
NCBI-ProteinID: AZZ39181
UniProt: A0A3Q9UQ58
LinkDB
Position
1061522..1063210
AA seq 562 aa
MAKNGLKNPPALKPDVLRVIPLGGLGDVGRNMSCYEINGEMLLIDCGVLFPEDDQPGVDL
LLPGLDYLDDKLDMIQALALTHGHEDHIGAVPYLLKRRPDIPVYGSRLTLALLEAKLKEH
RIKGYQLHVVREGDTAEIGEQFDLEFLAVNHSIPDALAVCVRTDAGTVLNTGDFKMDQLP
LDHRITDLRGFGRLGEEGVDLFMVDSTNAEVPGFIKSETEIEPAIERVFEKAQKKLIVAC
FSSHVHRVQQVLNMAVKHHRKVCFVGRSMIRNMSVARDLGYLHVPGNTLIELRELDKYSD
SQVVIVSTGSQGEPLSALARIANREHRDISVGEGDTVLLASSLIPGNENAVYRVINGLTR
LGAVVVHKGNALVHVSGHAAAGELLFAYNIVRPRAVMPIHGEIRHLIANAALARSTGVAE
ENVIVTEDGGVVDLDDGVPHLVGKVDASYIFVDGAGVGEVTEDSLTDRKLLGEEGFISVV
AGVNTRESSVISGPAIQARGFAEGEESYDKIRKQIVSELEKAMNDGVDDPHRLQQVVRRT
IGRWVSKTYRRRPMIVPVVIAV
NT seq 1689 nt   +upstreamnt  +downstreamnt
gtggcgaaaaatggactgaagaacccccctgccctcaaacctgacgtgctgcgggtcatc
ccgctcggcggtctgggagatgtgggacgcaacatgtcctgctacgagatcaacggcgag
atgctcctcatcgactgtggagtgctctttcccgaggacgaccagcctggcgtcgatctc
ctgctcccgggcctcgactacctcgacgacaagctggacatgatccaggccctcgcgctg
acccatggtcacgaggaccacatcggcgcggtgccctacctgctcaagcgtcggcccgac
atcccggtgtacggctcccggctgaccctggccctgctggaggccaagctcaaggagcac
cgcatcaagggctaccagctccacgtggtgcgcgagggggacaccgccgagatcggcgag
cagttcgacctggagttcctggccgtcaaccactcgatccccgacgccctggcggtgtgc
gtgcgcaccgatgccggcaccgtgctcaacaccggtgacttcaagatggaccagctcccc
ctggaccaccggatcaccgacctgcgcgggttcggtcggctcggcgaggagggcgtcgac
ctgttcatggtcgactccaccaatgccgaggtgccgggcttcatcaagtccgagaccgag
atcgagccggccatcgagagggtcttcgagaaggcccagaagaagctcatcgtggcctgc
ttctcctcccacgtgcaccgtgtccagcaggtcctcaacatggccgtcaagcatcaccgc
aaggtgtgtttcgtcggtcggtcgatgatccgcaacatgtcggtggcccgcgatctgggc
tacctccacgtgcccggcaacacgctcatcgaactgcgcgagctggacaagtactccgac
tcccaggtggtcatcgtctccaccggttcccagggggagccgctgtcggcgctggcccgg
atcgccaaccgcgagcaccgcgacatctcggtcggcgagggggacaccgtcctgctggcc
tcctcgttgatccccggcaacgagaacgccgtctaccgggtcatcaacggcctcacccgg
ctgggcgccgtggtggtccacaagggcaacgccctggtccacgtctcgggtcacgccgcc
gccggcgagctgctgttcgcctacaacatcgtccggccccgcgccgtgatgccgatccac
ggcgagatccgtcacctgatcgccaacgccgccctggccaggtccaccggggtggccgag
gagaacgtcatcgtcaccgaggacggcggggtggtcgatctggacgacggcgtcccgcac
ctggtcggcaaggtcgacgcctcctacatcttcgtcgacggcgccggtgtcggcgaggtc
accgaggactccctcaccgaccgcaagctgctcggcgaggaggggttcatctcggtggtc
gccggggtcaacacccgcgagtcctcggtcatctcgggacccgccatccaggcccgcgga
ttcgccgagggcgaggagtcctacgacaagatccgcaagcagatcgtcagcgagctcgag
aaggcgatgaacgacggcgtcgatgacccccaccgtctccagcaggtggtgcgtcgcacc
atcggccgatgggtctccaagacctaccgtcgtcgtccgatgatcgttccggtcgtcatc
gcggtctga

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