Acidipropionibacterium jensenii: C0Z10_04795
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Entry
C0Z10_04795 CDS
T05836
Name
(GenBank) ribonuclease J
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
aji
Acidipropionibacterium jensenii
Pathway
aji03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aji00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
C0Z10_04795
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aji03019
]
C0Z10_04795
Messenger RNA biogenesis [BR:
aji03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
C0Z10_04795
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Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
Lactamase_B
Lactamase_B_2
RMMBL
Anti-Pycsar_Apyc1
UL11
Motif
Other DBs
NCBI-ProteinID:
AZZ39181
UniProt:
A0A3Q9UQ58
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All DBs
Position
1061522..1063210
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AA seq
562 aa
AA seq
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MAKNGLKNPPALKPDVLRVIPLGGLGDVGRNMSCYEINGEMLLIDCGVLFPEDDQPGVDL
LLPGLDYLDDKLDMIQALALTHGHEDHIGAVPYLLKRRPDIPVYGSRLTLALLEAKLKEH
RIKGYQLHVVREGDTAEIGEQFDLEFLAVNHSIPDALAVCVRTDAGTVLNTGDFKMDQLP
LDHRITDLRGFGRLGEEGVDLFMVDSTNAEVPGFIKSETEIEPAIERVFEKAQKKLIVAC
FSSHVHRVQQVLNMAVKHHRKVCFVGRSMIRNMSVARDLGYLHVPGNTLIELRELDKYSD
SQVVIVSTGSQGEPLSALARIANREHRDISVGEGDTVLLASSLIPGNENAVYRVINGLTR
LGAVVVHKGNALVHVSGHAAAGELLFAYNIVRPRAVMPIHGEIRHLIANAALARSTGVAE
ENVIVTEDGGVVDLDDGVPHLVGKVDASYIFVDGAGVGEVTEDSLTDRKLLGEEGFISVV
AGVNTRESSVISGPAIQARGFAEGEESYDKIRKQIVSELEKAMNDGVDDPHRLQQVVRRT
IGRWVSKTYRRRPMIVPVVIAV
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
gtggcgaaaaatggactgaagaacccccctgccctcaaacctgacgtgctgcgggtcatc
ccgctcggcggtctgggagatgtgggacgcaacatgtcctgctacgagatcaacggcgag
atgctcctcatcgactgtggagtgctctttcccgaggacgaccagcctggcgtcgatctc
ctgctcccgggcctcgactacctcgacgacaagctggacatgatccaggccctcgcgctg
acccatggtcacgaggaccacatcggcgcggtgccctacctgctcaagcgtcggcccgac
atcccggtgtacggctcccggctgaccctggccctgctggaggccaagctcaaggagcac
cgcatcaagggctaccagctccacgtggtgcgcgagggggacaccgccgagatcggcgag
cagttcgacctggagttcctggccgtcaaccactcgatccccgacgccctggcggtgtgc
gtgcgcaccgatgccggcaccgtgctcaacaccggtgacttcaagatggaccagctcccc
ctggaccaccggatcaccgacctgcgcgggttcggtcggctcggcgaggagggcgtcgac
ctgttcatggtcgactccaccaatgccgaggtgccgggcttcatcaagtccgagaccgag
atcgagccggccatcgagagggtcttcgagaaggcccagaagaagctcatcgtggcctgc
ttctcctcccacgtgcaccgtgtccagcaggtcctcaacatggccgtcaagcatcaccgc
aaggtgtgtttcgtcggtcggtcgatgatccgcaacatgtcggtggcccgcgatctgggc
tacctccacgtgcccggcaacacgctcatcgaactgcgcgagctggacaagtactccgac
tcccaggtggtcatcgtctccaccggttcccagggggagccgctgtcggcgctggcccgg
atcgccaaccgcgagcaccgcgacatctcggtcggcgagggggacaccgtcctgctggcc
tcctcgttgatccccggcaacgagaacgccgtctaccgggtcatcaacggcctcacccgg
ctgggcgccgtggtggtccacaagggcaacgccctggtccacgtctcgggtcacgccgcc
gccggcgagctgctgttcgcctacaacatcgtccggccccgcgccgtgatgccgatccac
ggcgagatccgtcacctgatcgccaacgccgccctggccaggtccaccggggtggccgag
gagaacgtcatcgtcaccgaggacggcggggtggtcgatctggacgacggcgtcccgcac
ctggtcggcaaggtcgacgcctcctacatcttcgtcgacggcgccggtgtcggcgaggtc
accgaggactccctcaccgaccgcaagctgctcggcgaggaggggttcatctcggtggtc
gccggggtcaacacccgcgagtcctcggtcatctcgggacccgccatccaggcccgcgga
ttcgccgagggcgaggagtcctacgacaagatccgcaagcagatcgtcagcgagctcgag
aaggcgatgaacgacggcgtcgatgacccccaccgtctccagcaggtggtgcgtcgcacc
atcggccgatgggtctccaagacctaccgtcgtcgtccgatgatcgttccggtcgtcatc
gcggtctga
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