Acidipropionibacterium jensenii: C0Z10_05485
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Entry
C0Z10_05485 CDS
T05836
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
aji
Acidipropionibacterium jensenii
Pathway
aji03420
Nucleotide excision repair
aji03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
aji00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
C0Z10_05485
03430 Mismatch repair
C0Z10_05485
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aji03400
]
C0Z10_05485
Enzymes [BR:
aji01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
C0Z10_05485
DNA repair and recombination proteins [BR:
aji03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
C0Z10_05485
MMR (mismatch excision repair)
Other MMR factors
C0Z10_05485
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
AAA_30
AGAO-like_N2
Motif
Other DBs
NCBI-ProteinID:
AZZ39290
UniProt:
A0A3Q9UJ12
LinkDB
All DBs
Position
1207536..1210760
Genome browser
AA seq
1074 aa
AA seq
DB search
MITTARQVGELLDIPFSEEQLAVIGAPLHPCVVIAGAGTGKTTVMAARVVWLVASGQVAA
DQVLGLTFTRKACAELAGRIDTALAKAGIMETGDPSATVSTYDGFAASLVDEYGAWDGIE
TGDRLILKARCHQLALEVVTGLDHPPRMADRLTPMSIATAIVSLSGQMGSHLVDVDRVRS
ADRSWRAALAEAPTRRGGQIYADVARAMDTVDEREEMLGMVEAYRRLKQERGLVEYADRM
AQAAHLAGRRSQVGRDLRRRFRVVLLDEYQDTSSAQAQLLSDLFTGADPDSGLGHPVTAV
GDPLQAIYGWRGAAASNILGFSRQFPILDRTGQTRPAQEFSLLTNRRSGTRILDCANDIS
AELRGSGEIAGRVGALVAPVGTRPGEVVCHGHLSWTEECAWVADQLVEARARGRIDSWSQ
AAVLVRRNGDVADLHAALVNRQIPVQIANLSGLLQLPDVVMVVAHLRVLADRRDNQAWSA
LLAAPRLGLSPDDLAAVGRRAGELARTRAAEDRGLPGDDSPAAIGPDRPQPLLADAVAEP
GRLSESGRLSAGLARLASETRVLSAHAVDGPDDLVLRIQQVTGLADELAADEPARARARQ
GHLDALWSEIHSALRDDPDLTLPGLTAWLAAEEEFGDGLARSLPESSDAVVISTVHGAKG
LEWPLVMLPDLDDGVFPSSIPPDNPVTRATVLPSAVRGDADQVAQPQSGAREDLAAYKDA
LGQESRGAEDRLGYVALTRARDRLVVSWHRWRPPAVRPRVAGRYAEAVATRMAGWGLEAV
RPPEDEDTPAATGGPTGTDWPEPVDPDRADRLTDLAARVGAGRGAPAGLPDDPQEAQLVA
GWRRDAAILLAAARRQAALRSRPDLPLGLTTSQVVALHADRRTFLDSIRRPMPRRVLRGA
DIGTRFHEWLADYLQPGGQEPLALLDEGGAPLDPGASGGPDDPVLARLQRAFLASRWADA
RPLAIEEPFTLTVAGLVIRGRLDAVLADPDRPGEQVVVDWKTSAPDSADPLQLSVYRLAW
AGATGVDPQRVRAVFHHVGANQTVEAHPLLSMEELARVLSGESAPARQDTRQDD
NT seq
3225 nt
NT seq
+upstream
nt +downstream
nt
atgatcaccactgcccgacaggtcggcgagctgctcgacatccccttctccgaggaacag
ctcgcggtgatcggggcgcctctgcacccctgcgtcgtcatcgccggggcgggaaccggc
aagaccaccgtgatggcagcccgggtggtgtggttggtggcctccgggcaggtcgcggcc
gaccaggtgctgggactcaccttcacccggaaggcctgcgccgagctcgccggcaggatc
gacacggcactggccaaggccgggatcatggagaccggggacccgtctgccaccgtctcc
acctatgacgggttcgccgcttccctggtcgacgagtacggggcctgggacgggatcgag
accggggaccgtctcattctcaaggcccggtgccaccagctcgccctcgaggtggtgacg
ggtctggaccatcccccgcggatggccgaccggctcacccccatgtcgatcgccaccgcc
atcgtctcgctgtccgggcagatgggatcccacctggtcgacgtcgatcgggtgcgctcc
gccgaccggtcctggcgcgccgccctggccgaggctcccaccagacgcggggggcagatc
tacgccgacgtcgcccgggcgatggacaccgtcgacgagcgcgaggagatgctggggatg
gtcgaggcctaccggcgcctcaagcaggagcgagggctggtcgagtacgccgaccggatg
gcccaggcagcccatctggcgggtcgtcgcagccaggtcggacgggacctgcgtcgacgc
ttccgagtggtcctgctcgacgagtaccaggacacctcctcggcccaggcccagctgctg
tccgacctgttcaccggggccgaccccgacagcggtctcggccacccggtcaccgcggtc
ggcgatccccttcaggccatctacggctggcggggcgccgccgccagcaacatcctcggg
ttctcccgacagttcccgattctcgaccggaccggacagacccgacccgcccaggagttc
agcctgctcaccaaccgtcgttccggcacccgcatcctggactgcgccaatgacatctcg
gccgagctcagggggtcgggggagatcgcaggaagagtcggggcactggtcgctccggtc
ggcacccggcccggcgaggtggtctgccacggccatctcagctggaccgaggagtgcgcc
tgggtggccgaccagctggtcgaggcgcgggcgcgcggccggatcgactcgtggtcgcag
gccgctgtcttggtgcgccggaacggcgacgtcgccgacctgcacgccgccctggtgaac
cggcagatccccgtccagatcgccaacctgtcggggctgctccaactgcccgacgtcgtg
atggtcgtcgcccatctgcgcgtgctggccgacaggcgggacaaccaggcctggtcagcg
ctgctggcggccccccggctcggactgtcccccgacgatctcgccgccgtggggaggcgg
gccggcgagctggccaggacccgggcggcggaggaccgcggcctgcccggggacgactcg
cccgcggccatcggtcccgaccggccccagccgctgctggccgatgcggtggccgagccc
ggacggctgtcggagtccggccggttgtccgcggggctggcgcgactggcctccgagacc
cgggtcctcagtgctcacgccgtcgacggacccgatgatctcgtgctgcggatccagcag
gtcaccggcctggccgacgagctggccgccgacgagccggcccgggcccgtgccaggcag
gggcatctggacgcactgtggtcggagatccactccgcgctgcgcgacgatcccgacctc
accctgcccggtctcaccgcctggctggcggccgaggaggagttcggggacgggctggcc
cgcagcctgcccgagagctcggacgccgtggtgatcagcacggtccacggtgccaagggc
ctggagtggccactggtaatgctgcccgacctcgatgacggcgtcttcccctcctcgatt
ccccccgacaatccggtgacacgggccaccgtgctgccctcggcggtgcgcggcgacgcc
gaccaggtcgcccagccgcagtccggtgcccgcgaggacctggctgcctacaaggacgca
ctgggtcaggagtcgcgaggggccgaggacagactcggctacgtggccctgacacgggcg
cgggaccggctcgtggtgtcctggcaccgctggcgtccaccggccgtcagaccacgagtg
gcaggacgctatgccgaggcggtggcgacccggatggccggctggggactggaggcggtt
cggccccccgaggacgaggacaccccggcagccaccggcggccctaccggaacagactgg
cccgagccggtcgaccccgaccgcgccgaccgactcaccgacctggcggccagggtcggc
gccggacggggtgctcccgccggtcttcccgatgacccgcaggaggcgcaactggtcgcc
ggctggcgccgcgacgccgccatcctgctggccgcagcccgacggcaggccgcgctccgg
tcccggcccgatctgcccctgggcctcacgacatcccaggtggtggccctccatgccgat
cgccggaccttcctcgactcgatacgccgcccgatgccgcgtcgagtgctgcgcggggcc
gacatcggcacccgcttccacgagtggttggccgactacctgcagcccggcggacaggag
ccgctggccctgctcgacgagggcggagcaccgctcgacccgggcgcctcgggaggcccc
gacgatccggtgctggccagactgcagcgcgccttcctcgccagtcgctgggccgatgca
cgaccgctggcgatcgaggagccattcaccctcaccgtcgccggactggtgatccgtgga
cggttggacgccgtgctggccgatcccgaccgtcccggggagcaggtggtcgtcgactgg
aagacctcggcccccgacagtgccgacccgctccagctgtcggtctaccggctcgcctgg
gcgggagccactggggtcgatccgcagcgggtccgcgccgtcttccaccacgtcggcgcc
aaccagaccgtggaggcccacccgctgctgtcgatggaggagctggcgagggttctgtcc
ggcgagtcggcacccgcccggcaggacacccgacaggacgactga
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