Acidipropionibacterium jensenii: C0Z10_07840
Help
Entry
C0Z10_07840 CDS
T05836
Name
(GenBank) RecQ family ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
aji
Acidipropionibacterium jensenii
Pathway
aji03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aji00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
C0Z10_07840
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aji03019
]
C0Z10_07840
03400 DNA repair and recombination proteins [BR:
aji03400
]
C0Z10_07840
Enzymes [BR:
aji01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
C0Z10_07840
Messenger RNA biogenesis [BR:
aji03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
C0Z10_07840
DNA repair and recombination proteins [BR:
aji03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
C0Z10_07840
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
RecQ_Zn_bind
Glyco_transf_4
HTH_Cmi2_C
Motif
Other DBs
NCBI-ProteinID:
AZZ39677
UniProt:
A0A3Q9UDW7
LinkDB
All DBs
Position
1750991..1753126
Genome browser
AA seq
711 aa
AA seq
DB search
MTELRDQGLDILRRLTGNPHADFHAGQWEAIEALVADHRRALVVERTGWGKSAVYFVAAL
LQRRAGSGPALIVSPLLALMRDQVGAAERAGVRAASISSANVTEWDQIRSLLDQDSLDVL
LVSPERLVNPRFAAEQLPELTARMGMLVIDEAHCISDWGHDFRPDYRRIRDLVAALPAGV
PVLATTATANSRVVTDVVEQIAPADQPGEDRGVFVLRGPLARDSLRLGVLDLPRPELRLA
WLCSHLGECTGSGIIYCLTVSAAEDTARALVEAGHHVKVYTGRTDAEERADLETELTGNR
VKALVATSALGMGFDKPDLGFVIHLGAPSSPVAYYQQVGRAGRATASADVLLLPGPEDRD
IWHYFATSGMPTEQRADAVLSALSTEQTLSTPALEARVDIRRSPLELLLKVLAVDGAVER
VQGGWRSTGRGWVYDAQRYARIAAARAAEQDAMERYEHLDSCRMKFLTGQLDDPDTTPCG
RCDVCAGAWYPTDVDPDQQDRARQALDRVGVPVEPRRSWPTGLDRLGVDLRGRIPVDQQA
REGRVIARLSDLGWGGPLRELLTTDEQGRPVDAEVPAGLAGACLRVLAEWDWSLRPAAVV
RVPSVSRPRLVDSLAAGVARVGRLDDLGSLDLAPGAEPLDPHVNSAFRIRDLQGRFRVGE
GLAERIGALAGAPVLLVDDVIISRWTMTVAARQLRLAGAGEILPLALALGS
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaactcagggaccagggcctcgacatcctgcgcaggctcaccgggaacccgcac
gccgacttccacgccggccagtgggaggccatcgaggccctggtggccgaccaccggcgc
gccctggtggtggagcggaccggctggggcaagtcggcggtctacttcgtggcagccctg
ctgcagcgccgcgccggcagcggaccggccctcatcgtctctcccctgctggccctgatg
cgcgaccaggtgggggccgccgaacgggccggggtgcgcgccgcctcgatctccagcgcc
aatgtcaccgagtgggaccagatccgctccctcctcgaccaggacagcctggatgtcctg
ctggtctcccccgaacgcctggtcaacccgcggttcgccgccgagcagctgcccgagctc
accgcgaggatgggcatgctggtcatcgacgaggcccactgcatctccgactggggccac
gacttccgccccgactaccggcggatccgcgacctggtggccgccctgccggccggggtg
ccggtgctggccaccacggccaccgccaactcgcgggtggtcaccgatgtcgtcgagcag
atcgccccggccgaccagcccggcgaggaccgcggggtcttcgtgctgcgcggcccgctg
gcccgcgactccctgcgactgggggtgctggatctcccccgccccgagctgcgactggcc
tggttgtgctcccatctcggcgagtgcaccggctcggggatcatctactgcctcaccgtc
tcggccgccgaggacaccgcccgggcactcgtcgaggccggccaccacgtcaaggtctac
accgggcgcaccgacgccgaggagcgcgccgatctggagaccgagctcaccgggaaccgg
gtgaaggcgctggtggccaccagcgccctgggaatgggattcgacaagccggacctgggc
ttcgtcatccacctgggggcaccgagctcaccggtggcctactaccagcaggtcggccgc
gccggccgcgccaccgcctcggccgacgtcctgctgctgcccgggccggaggaccgcgac
atctggcactacttcgccaccagcgggatgcccaccgagcagcgcgccgacgccgtgctg
tcggcgctgtccaccgagcagacgctgtccaccccggccctggaggcccgggtcgacatc
cgccgcagtcccctggagctgctactcaaggtgctggccgtcgacggtgcggtggagcgg
gtccagggaggctggcggtccaccggccggggctgggtctacgacgcccagcggtacgcc
cggatcgccgccgcccgggccgccgagcaggacgccatggagcgctacgagcacctggac
agctgccggatgaagttcctcaccggacagctggacgatcccgacaccaccccgtgcggg
cgctgcgatgtctgcgccggagcgtggtaccccaccgacgtcgacccggaccagcaggac
cgggcgcgccaggcgctggaccgggtcggggtgccggtcgagccccggcgcagctggccg
accggcctggaccggctcggggtcgatctgaggggtcgcatccctgtcgaccagcaggcc
cgcgagggccgggtgatcgccaggctctccgacctgggctggggaggaccgctgcgcgag
ctgctcaccaccgacgagcagggccgcccggtcgacgccgaggtgcccgccggcctggcg
ggggcctgcctgcgggtgctcgccgagtgggactggtcgctgcgaccggctgcggtggtc
cgggtgccctctgtgagccggccgcgactggtggactcgctggccgccggggtcgcccgg
gtcgggcggctcgacgacctgggatccctggacctggcacccggcgccgaaccgctggac
ccgcacgtcaactccgccttccggatccgagacctgcagggccggttccgggtcggtgaa
gggctggccgagcggatcggcgccctggccggggccccggtgctgctggtcgacgatgtc
atcatcagccgctggaccatgacggtggcggcccggcagctccggctggccggtgccggc
gagatcctgccgctggccctggcgctgggctcctga
DBGET
integrated database retrieval system
