Apostichopus japonicus (Japanese sea cucumber): 139954823
Help
Entry
139954823 CDS
T10891
Name
(RefSeq) probable global transcription activator SNF2L2 isoform X1
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
ajj Apostichopus japonicus (Japanese sea cucumber)
Pathway
ajj03082
ATP-dependent chromatin remodeling
Brite
Transcription machinery [BR:
ajj03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
139954823
Chromosome and associated proteins [BR:
ajj03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
139954823
Chromatin remodeling factors
BAF complex
139954823
PBAF complex
139954823
GBAF(ncBAF) complex
139954823
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
139954823
NCBI-ProteinID:
XP_071810886
LinkDB
All DBs
Position
2:complement(28722758..28749561)
Genome browser
AA seq
1954 aa
AA seq
DB search
MSSRPPSNQGGMMDPNTPMTNQQMANNAMQQGHSPMAAPSPASMTGGHSSSPAPLRPVPS
PSPMHVGPGPSPGGMHGPSPSQSPMHGPGPSPSPMHAPGPSQSPMPMSQSPAAMQLAASP
GMPHGPGGIQATMADGSVMHNASHMAGPHRQMMHQGQMPNQGPGMSHNTPISQGPMPNHG
NPMQQFQSPMGGNQTIMHPGNRSAMPHPSQGAMPPNQAYLVNQGGHMIAGHNQTPMQPGT
MPGQGGPLPNNQSAMMNPPSGPPMSGHHGMMPTQSNMGPQAGNYHQGQPNSGYPPSQYNQ
GPMPTPQGSMQPNQAAMNQPGGPMPNQAYMHGPGAMPSSHGGPQPQQGQGYPQDAQNYGL
LQRALESMQEKGLQNDPRYSHLMYMASRAKPYQQQQQQQQQQQQQQQQQQQQGPPTQPQG
PGMSSTPVHSSGPAGVAPGSSGPIPSPNQGPPSQGSHPAAAGFGGQMDAPPTGGSASSSS
GGTQPQMNQVPPGASSSPGPNPSQRQQPPFAHGQLQQLKAQILVYKLLARNQPLPDNWRQ
AIQSRPVWGPGGAPFPKTMGMPNQAPSGPPGPPASGGGPTQWPPSSQSPSQNSNIVPHPQ
PSPQHPPFPQQKGAQPVKAPTSTAVPQPSPQYQKTQSNIPTVMMLQPKQNKLVPVEKPEG
IDPITALNERENRIASRIAYRIQELQSLPGSLPQDLKVKATIELKALRLLNVQKQLRQEI
VSSMRSDTTLETALNSKAYKRSKKQTLRDARITEKLERQQKMEQEKKKKQKHQEYLSRVL
AHAKEFKEYHRSMQMKISRCNKAIMVYHQNTEREQKKESERMEKERMRRLMAEDEEGYRK
LIDEKKDKRLAFLLGQTDQYIASLSELVKEHQMQVLKKKQERKKKKKKKPSLPESLREAL
QDESSQLSDMPVKVISTQTGQLLSGEDAPRASQLEAWLEMHPGYQVAPRDDREEPSEEEG
SGSEMEEDEEEEEEPPPPLIEPVIEVKTFADLMEEPDMNKLVKAHDDDEYKASVGSYYAE
AHKNREVISDQPEMMVNGTLKEYQIKGLEWMVSLYNNNLNGILADEMGLGKTIQTIAMIC
YLIEKKRVNGPYLIIVPLSTLSNWTLEFDKWSPTICKVVYKGSPQLRKTLGIQLRTMKFN
VLLTTYEYVMKDKAVLAKIRWKSMIVDEGHRMKNHHCKLTQVLNTHYSAPHRLLLTGTPL
QNKLPELWALLNFLLPSIFKCCSTFDQWFNAPFAATGEKVELNGEETILIIRRLHKVLRP
FLLRRLKREVESQLPEKVEYVIKCNMSALQRLLYRHMQRGVMLTDGSEKDKKGRGGTRAL
MNSIMQLRKICNHPFMFPHIEESFVEHLGYTGGFITGADLYRVGGKFELLDRILPKLKAT
KHRVLLFCQMTSLMTILEDYFIYREFKYLRLDGTTKAEDRGMLLAEFNQKGSDKFIFLLS
TRAGGLGLNLQAADTVVIFDSDWNPHQDIQAQDRAHRIGQKNEVRVLRLMTVQSVEEKIQ
ASAKFKLNVDHKVIQAGMFDQKSTASERRAYLKFLLEQDGDPDEDENEVPDNETINQMIA
RSEEEFEIYQRMDIDRRRNETQRGCKPRLMEEDELPSWMMKDESEVERLTYEEEAEKLFG
LGRGSRNRKDVDYSDALTDKEWLRVSPTSGKAGPVSEGGNKEWLRAVEDGNLEEMESMKK
LKKDRKRKRKEKDAQPDDERDERDERDERDEEPEEKPGKKKRGRPPAEKLPPNPPKLTKI
MNKLMNIMGKYKDSNGRSLAHPFLQLPPKRELPDYYELIEKPMDFKKIRDRIKNHRYRAL
DDLEADVTLMFYNAQTYNLEGSQIYEDSIVMQSVFTNARECLEHTGQLPNQVDSESEEES
QEDKNSETDSKSSVKMKIKLNAKEKGKDKGKKPAKRGRPPRKAVVSDDDDDDDDNQQKSD
SSDDSSSDGSDDDTADSSGPSSRGESPGPRKGKR
NT seq
5865 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcaagaccaccatcaaatcaggggggtatgatggatcccaacacccctatgaca
aatcaacaaatggccaacaatgccatgcaacaagggcacagtcctatggcagcacctagc
cctgcttcaatgactggaggtcacagttctagtccagcacctttaagaccagtaccgagt
ccaagccccatgcatgttggacctggccctagtccaggtggaatgcatggcccttcacct
agtcagagtccaatgcatggtccaggacctagccccagtccaatgcatgccccagggcca
tcacagagccccatgcctatgtctcagagtccagctgctatgcaattagccgctagtcct
gggatgccacatgggcccggtggaatccaagcgaccatggctgatggtagcgtgatgcat
aatgctagtcacatggccggccctcatcgacagatgatgcatcaaggccaaatgccaaac
caaggtccaggaatgtcccataacactccgataagccaggggcctatgcctaaccacggt
aaccccatgcagcagtttcagtcgccgatgggcggtaatcaaactataatgcaccctgga
aatagaagtgccatgcctcaccctagtcaaggtgcaatgcctccgaaccaagcctactta
gtgaaccaaggaggacatatgattgcaggtcacaatcaaactcctatgcaaccagggacg
atgccgggacaaggtggaccgctgcctaataaccagtcggccatgatgaatccgccgagt
ggacccccgatgagtggccaccatggcatgatgccaactcaaagcaacatgggacctcag
gcaggaaattaccatcagggacaaccaaattctggttatcccccaagccaatacaatcaa
ggcccaatgccaacccctcaagggagcatgcaaccgaaccaagctgcaatgaaccagccg
ggtggtccaatgccaaatcaagcatacatgcacggacctggtgccatgccgtccagtcac
ggcggccctcaacctcagcaaggccaaggttacccacaggatgcacaaaactatggcttg
ctacaaagagcattggagagcatgcaggagaaagggttgcaaaatgatccacgttacagc
catctcatgtacatggcaagcagggccaaaccctatcaacaacaacagcaacaacaacag
cagcaacagcaacaacaacagcaacaacaacaacaaggacctcctacacagccccaaggt
cctggaatgagttctactccagtccatagttcaggcccagcaggggtagctccaggttca
tctggacctataccttcacccaatcaaggaccaccatcacagggcagtcatccagcagca
gcaggatttggaggtcagatggatgcaccacctacagggggatcagcatcatccagttca
ggtggtacccaaccacagatgaaccaagtaccacctggtgcgtcatcttccccagggcct
aatcccagtcagaggcagcagcctccatttgctcatgggcagctacagcagttgaaggct
cagatcctggtgtataaactactggccaggaatcaacctctcccagataactggaggcag
gccatacagtcgagaccagtgtggggaccaggtggtgctccattccctaaaaccatggga
atgccaaaccaagcaccatcagggcccccgggtccaccagccagtggtggtggtccaacc
cagtggcctccttcatcgcagagccccagccagaatagtaacattgtccctcatccccag
ccatctccacaacatccaccgtttccacagcagaaaggagcccagcctgtgaaggcaccc
acaagtacagcagtcccccaaccatctccccagtaccagaagacacagtctaacatacca
accgtgatgatgctacagcccaagcagaacaagctagtaccggtggagaaaccagaaggg
attgacccaattacagctcttaacgagagagaaaacaggattgcatcccgcattgcttac
cgcatccaagaattgcagtcattgcccggtagccttccacaggatttgaaagtgaaagcc
actatagaactgaaagctctgcggctactgaatgttcagaaacagctacgacaagaaatt
gtgagtagcatgcgaagtgatacaactctggagactgccctcaactcaaaggcgtacaaa
cgcagcaagaaacagacgctgagagatgcccgtatcacggagaagctggagaggcagcag
aagatggagcaggagaagaaaaagaagcagaaacaccaggaatatctgagccgagtcctg
gcccacgctaaggagttcaaggagtaccatcgcagtatgcagatgaagatctcgagatgt
aacaaagccatcatggtgtatcaccagaacacggagagggagcagaagaaggagagcgag
aggatggagaaggaacgaatgaggagactgatggcggaagatgaagaaggctacagaaag
ctgatcgacgagaagaaggataaacgtcttgcattcctgctgggacagactgaccagtac
atcgccagcctgtctgagctcgtgaaggagcaccagatgcaagtcctgaagaagaagcag
gagagaaagaagaagaagaagaagaaaccatctctacccgagagcctcagagaagcctta
caagatgagagtagtcagcttagtgacatgccggtcaaggtgatcagtacacagactgga
cagttactgagtggggaagatgcacccagggcatcccagctggaggcatggttggagatg
caccctgggtaccaggtggcacccagagatgatagagaagagccatccgaggaggaggga
agcggatcagagatggaggaagatgaagaggaggaagaggaacccccgcctcctctgata
gaaccagtcatagaggtgaaaacgtttgcagacctcatggaggaaccagacatgaataaa
cttgtgaaagcccacgatgacgacgaatacaaggctagtgttggtagttactacgctgaa
gcccacaagaacagagaggttatcagtgaccagccagaaatgatggtgaatggtaccctg
aaagagtaccagattaagggtctagagtggatggtgtctctgtataacaacaacttgaat
ggcatcttggctgacgagatggggctcggcaagaccatccagaccatcgctatgatctgc
taccttattgagaagaagagggtcaacgggccttacctcattattgtgccactctcaacc
ttatccaactggactcttgagtttgataaatggtcaccgacgatctgcaaagtcgtctac
aaagggtccccacagttgaggaagaccctaggcatccagctacgtacgatgaaattcaac
gttctcctgacgacctatgaatatgtcatgaaagacaaggctgtactcgccaagatccga
tggaagtccatgatagtcgacgagggtcacaggatgaagaaccatcactgtaagctaacc
caggtgctgaacacccattactctgcaccccaccgactactcctgacaggaacacctcta
cagaacaaactcccagaactatgggcgttgttgaatttcctgctaccaagcatcttcaag
tgctgctcgacattcgatcagtggttcaacgccccctttgcagcgactggcgagaaggtg
gaactaaacggagaagaaaccatcctgatcatccggcgcctccacaaggtcctgcgtcct
ttcttgctgaggcggttgaagagggaagtggaatcacaactaccagagaaggtggagtac
gtgatcaagtgtaacatgtctgcgttacagaggctcctgtaccgtcatatgcagagaggt
gtcatgctgactgatggatcagagaaggataagaagggtcgtggtggcacaagagctctc
atgaactccatcatgcagctgaggaagatttgtaaccatccattcatgttcccgcatatt
gaggagtcgtttgtggaacacctgggctacaccggcggtttcatcactggtgcagacctg
taccgtgtaggtgggaagtttgagctccttgaccgtatcttgcccaagctgaaggccacc
aaacatcgggtgcttctcttctgtcaaatgaccagtcttatgaccattctggaagactac
tttatttacagagagtttaagtacctgcgactggatggaacaaccaaagctgaagacaga
ggaatgctcttggccgagtttaaccagaaaggctcggacaagttcatctttctgctcagt
actcgagctggtggacttggtctgaacctgcaggctgcagatactgttgtcatctttgac
agtgattggaacccacatcaggatattcaagcccaggatcgggcgcatcgaatcggccag
aagaacgaagtacgtgtcctgcgtctcatgacggtgcagagtgtggaagagaagattcag
gcctcggccaagttcaagctgaatgtcgaccacaaggtcatccaggccggtatgttcgac
cagaagtccaccgcgtccgagagacgagcttacttgaaatttcttctcgagcaggacgga
gatccggacgaggatgagaacgaagtacccgacaacgagaccattaaccagatgattgcc
cgtagcgaagaagagtttgaaatctaccagaggatggacattgatagacgaagaaatgag
actcagaggggatgtaaacctcgcctcatggaggaagacgaactaccctcttggatgatg
aaggacgagagtgaggtagagcgactgacttacgaagaggaagccgagaagctgtttggt
ctcggcagaggatctcgaaacaggaaggatgtagactacagtgacgctctgactgacaag
gaatggttgagggtaagtcctaccagtggtaaggcggggccagtcagtgaggggggaaac
aaggaatggttgagggctgtagaagatggaaacctggaagaaatggaatccatgaagaaa
ctgaagaaggatcgaaagagaaaacgtaaagagaaggacgcccagccggatgatgaaagg
gatgaacgagatgagagggatgaaagagatgaagaaccagaagagaagcctggcaagaag
aagagaggcagaccacctgcagagaaactacctcctaatcctcccaagctgacaaagatt
atgaataaactcatgaatatcatggggaaatacaaagacagcaatggccgttctctagca
catccattcctgcagttgccgcccaaacgagagctgcccgattactacgagctgatcgag
aaacccatggacttcaagaagatccgtgaccggatcaagaaccaccgttaccgagccctg
gacgacctggaagcggacgtgactctcatgttctacaacgcccagacctataatctggag
ggatctcagatctatgaggattctatcgtcatgcagtcagtgttcaccaacgccagagag
tgtctggagcacaccggccagctgccaaaccaggtggactcggagagcgaggaagagagc
caggaagacaagaactctgaaactgactcaaaatcatcagtcaagatgaagatcaaactc
aatgcaaaggagaaggggaaagacaagggtaagaaaccggcaaagagagggcgccctccc
aggaaagcagtcgtgagtgacgacgatgacgatgatgacgacaaccaacaaaagtctgat
agcagtgatgattcgtcttcagatggcagcgatgacgacactgcagattcttctggtcct
tcatcccgaggtgaatccccaggtcctcgtaaaggaaaacgttga
DBGET
integrated database retrieval system
