Apostichopus japonicus (Japanese sea cucumber): 139954902
Help
Entry
139954902 CDS
T10891
Name
(RefSeq) double-strand-break repair protein rad21 homolog isoform X1
KO
K06670
cohesin complex subunit SCC1
Organism
ajj Apostichopus japonicus (Japanese sea cucumber)
Brite
KEGG Orthology (KO) [BR:
ajj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ajj03036
]
139954902
Chromosome and associated proteins [BR:
ajj03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
139954902
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rad21_Rec8_N
Rad21_Rec8
SMC_ScpA
Motif
Other DBs
NCBI-GeneID:
139954902
NCBI-ProteinID:
XP_071810986
LinkDB
All DBs
Position
17:complement(30688691..30700752)
Genome browser
AA seq
663 aa
AA seq
DB search
MFYAHFVLSKKGPLARIWLAAHWDKKLTKAHVYETNVSSCVDSIMHPKVKLALRTSGHLL
LGVVRIHSRKAKYLLADCNEAFVKIKMAFRPGVVDLPEENREAAFATITLPEVFHDFDTS
IPDFNDVEVQKQFSLNQSRVEDITMKEDLVNINLGQEDFGDLGFDDREMLREASAANDST
YKQSDESTLLADGSKTKEAPIDASMDKPMDMGLEEQFRNDGFGAEMGMGDGILGDEFMNE
GGNLFEEQPEIQAGEPVVVQNVEPPPGAAEDTDDEEKEPEPPKAPVVPATPTPQDGQIKA
AAAPATAPEGAPPISDATLMQPPAAADQTTLVQNEDMEFALQPIVDVTGVKESRQKRKRK
LVVDEVKELAGDLIKSQLKDTSDIVTSLDLAPPTKKLMLWKETGGAEKLFGLPGRLHNSK
RILVVFARNLQTDIPRDVKRQRRLPPPVPLEEPEVQRDILSESLGDISLSSRLSAAPLLP
VEEERPQQTPADSQPGTSSIDQPPPQQQQDFSFMSGRRGSASSSDGDYGGDDPFDGGYDD
GDDDIPSIKGDDHEEPVPEEASNVFANEVEEDVEAEEGEDEEKHHERVLNKRAHSMLMGI
NKLLQQGETVSFTEVTRKLNRKQVASKFYSLLVLKKQQAVEVGQEGSFADIVISRGVLMA
DML
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
atgttttatgcacattttgtgctcagcaagaaaggaccgttggcgaggatatggcttgcc
gctcattgggacaagaagttgaccaaagctcatgtttatgagaccaatgtatcatcatgt
gtggacagtattatgcacccaaaggtgaagctagcgttaagaacgtctggtcacctgctg
ttgggtgttgtccgtattcatagccgtaaagccaagtacctgttggcagactgcaatgaa
gcctttgttaagattaagatggccttcaggcccggagtggtcgatttgcccgaggagaat
cgtgaagcagcttttgccaccatcactctaccggaagttttccacgattttgatacttcg
atacctgatttcaatgatgttgaggtacagaagcagttcagtctaaaccagagccgagtg
gaggatatcaccatgaaagaggatcttgtcaatattaatcttggccaggaagactttggt
gatctcggctttgacgacagggagatgctccgcgaggcgtccgcagcgaacgactctact
tacaagcagagcgacgaatccacattgcttgccgacgggagtaagactaaagaagcgcca
atcgacgcgtctatggataaaccgatggacatggggttagaggagcagtttagaaatgac
ggctttggagctgagatgggaatgggtgatggtatactcggtgacgagtttatgaatgag
ggaggtaatctgtttgaagagcagcctgaaatccaagccggagagccagtggtcgtccag
aacgtagaaccaccaccgggggcagctgaagatacagacgacgaagagaaggagccggaa
ccaccgaaggcccccgttgtcccagccactccaactcctcaggatggccagatcaaagca
gcagcagccccagcaactgccccagaaggagccccaccgatttctgacgcgaccctaatg
cagcctccagctgctgccgaccaaacaacacttgtgcaaaatgaagatatggagtttgct
ctgcaaccaatcgtagatgttacaggcgttaaagagagcagacagaagaggaaacgtaag
ctggtggtggacgaggtcaaggaactggccggagatctcatcaagtcacaactcaaggac
acctctgatatcgtcacatccctggacttggctccccctaccaagaagttgatgttgtgg
aaagagacgggcggagcagagaagttgtttgggttacccggtagattacacaactccaag
aggatattggtggtgtttgcaaggaaccttcaaacagatatacccagagacgtgaagagg
cagagaaggcttcctcctccagtacccctggaggaaccagaggtgcagagggatatcctc
agtgaatctttaggagacatcagcttatcctcgagattatccgcagcgccactacttcca
gtggaagaggaacgccctcagcagacaccagcagactcccagccagggacatccagcata
gatcaaccccctccccagcaacagcaagatttctccttcatgtccgggaggcggggatcg
gcctcgtccagtgacggtgactatgggggtgacgaccccttcgatggtggctacgacgac
ggcgatgacgatataccgtcaatcaaaggagacgatcacgaggaaccggtgccagaagag
gccagcaatgtctttgccaatgaagttgaagaagatgtggaagcggaagagggtgaggac
gaggagaaacatcacgagagagtactcaacaagagggcgcactccatgttgatgggtatt
aacaaactcttacagcaaggcgagaccgtctctttcaccgaggtcacgagaaagcttaac
cgaaagcaagtcgcctctaagttctattctctgttagtgttgaagaaacagcaggccgtt
gaggtgggccaggaaggttccttcgcagatatcgtcatcagtcgaggtgtgttgatggca
gatatgttgtag
DBGET
integrated database retrieval system
