Apostichopus japonicus (Japanese sea cucumber): 139954928
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Entry
139954928 CDS
T10891
Name
(RefSeq) protein scribble homolog isoform X1
KO
K16175
protein scribble
Organism
ajj Apostichopus japonicus (Japanese sea cucumber)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
LRR_8
LRR_14
PDZ_6
LRR_4
PDZ_2
LRR_1
LRR_13
LRR_LRWD1
LRR_9
LRR_Zer-1
Motif
Other DBs
NCBI-GeneID:
139954928
NCBI-ProteinID:
XP_071811022
LinkDB
All DBs
Position
17:complement(32270604..32392502)
Genome browser
AA seq
1565 aa
AA seq
DB search
MFRCIPLFRACNRHVEYIDRRHGNLNNVPDDVFRYARTLEELLLDANQIRDLPKQFFRLV
NLQKLGLSDNELERLPGEISHFGNLVELDISRNDIMEIPDSIRFCKCLTHVDLSGNPLSR
LPPSFTQLEELRFLTLNDVSLESLPSDIGSLSNLVTLELRENLLKSMPDSISYLTKLEQL
DIGSNEYEELPDTLGQLHNLMELWLDCNALTAVPSEIGNLSNLTCLDISENNLEELPEEI
SGLKSLTDLTLSQNCLERLPEGIGNLTELSILKVDQNRLVVLTPAVGSCENLTELIVTEN
LLQALPPTVGYLKKLNNLNVDRNRLTHLPSELGKCTRLGVLSLRDNRVTRLPPELGLLLE
LHVLDVCGNRLDWIPIQLSNCNLKALWLSENQAQPLINFQTEEIGPQKLKVLTCFLLPQR
GPTESMENLLRGSTATEEEPNMEKAGEREIRFAPGTHNYEDTNSFIRHGTPHPRELKARH
PKFFMHGKGREVDGHLAPHESENNLEYYQEDELRNGADDQQQHHQPSVNFLVEPKVIPPP
ATTEANAEPVQLEERQLTESEAVRQNVEEAAKQPDTLTETEEERHVGFALEEEQEMEDQP
EKSDLKLHRRDTPHYLKNKRINLTSQTDDEAAALIHQVLAKASSPQNEQPPSLPVEEERV
EITFSRDGDGLGISIAGGQGSTPFKGNDEGIFISRVVDGGCAAKYGLKVGDKVISVNEST
LVDANHLDAVEVLRNAGNDIRIVVLREIKEDDDVVVVETSPPPPEVEDLGDGPRVDQTPT
GEIVEQNHIQDERWEKHGVSFAPEPKFHLVKEKIAVRLTKDNNGLGFSVAGGKGSTPYKG
TDTSIFISRISEGGAADRCAALIVGDKVLSINNLDMTLARHDHAVALLTSSRTIDLVVLR
ESMEVEHHKPLVKHEPPQFRFQLANKEDSNHVNGPSEPEIEEVNLVRTGGPLGLSIVGGI
DHSSYPFGADKPGIFISKIVPNGSAAQTNLCVGDRLLKVNGEDMATAKHQDAVAMLLSNS
QAIHLLVQHDPPPAGLQEVFITKAPGEKLGISIRGGNKGHPGNPLDKNDEGIFISKINDV
GAAAREGTLGVGQRILEVNGQSMLGCKHGEAVRALRGAGDKLTLLVCDGYDPEEVEYWRS
RPGEMNNPLSQVDIVKRQSQESINSIDREMSSEELKRVNMESQLQNEADEFEKEELEKME
ALRKQQEEATQRLLTEENEEEITVTVETPIKSSPNPSSAGAEVNPNPAGGVEDIPSPIRL
DSVDKPIKKPPPPPVAPRPPKEIRERIVEAKQAARTSNASTLTSGSASPMSSEESHSLPT
SPSATPQEVTLHKSALEARKEALKASRLGSSKTPEVAPRPFKVAFKPSRVSAPKEPLRID
GEKSEPESLGFKDKWKRFEEQIDEQAHSTPKSTSKKVALVSQADLNNMKVDKERKQNQVT
ETNENDGLSAEDRRRKILGLDPLPEAPPSPSSSDLNDAADTNGQPERPMSPSEKRAQDAE
ERAAKREARMKDLEDDALQAHIILETDYSKTKLRVDGSVPNGNSAPDVQITTSGGIEDIK
FMDED
NT seq
4698 nt
NT seq
+upstream
nt +downstream
nt
atgttccgttgcattccactgtttcgggcgtgtaaccgtcacgttgagtatattgatagg
cgacacggtaacttgaacaatgtaccagacgatgtgttcagatatgcaagaacactggaa
gaattgttactcgatgccaatcaaataagggacttacctaagcaattttttagacttgta
aatcttcagaaacttggcttaagcgacaatgaactggaaaggctgccgggagaaattagt
cactttggtaatcttgtggaattggatatcagcagaaatgatatcatggaaattccagac
agtatcagattttgtaaatgtctcacacatgttgaccttagtggcaaccctctatcaagg
ttacccccaagtttcactcagttggaagagctccgtttcttgaccttaaacgatgtatca
ttggagagcctgccatcagacattggaagcctttcaaatctagtaaccttggaacttcgt
gaaaatttattaaagagcatgccggattcaatatcgtaccttaccaaattagaacagttg
gacatcggcagcaacgaatatgaagagcttccagacactctcgggcagttacataacctt
atggaactctggctggattgtaatgctctaactgcggtgccatcggagatcggaaaccta
tccaacctgacgtgtttagacatctcagagaacaacctagaggaactgccagaggagata
tctggactgaagagtctcaccgatctgactctctcgcagaactgtttggagaggttaccg
gaaggcatcggtaatctaacagagttgagcatcctgaaagttgaccagaatagactggtg
gtgctcacgccagcagttggcagctgcgaaaatttaacggaactcatcgtgaccgagaac
ctgctgcaagcgttgcctcctacggtcggttacctgaagaagctgaacaacttaaacgta
gacaggaatcgattgacgcatttaccctcggagctcgggaagtgcacaaggctaggggtg
ttgtcactgagagataacagggtgacacgattacctccggagctcggcctcctgctagaa
cttcacgttcttgatgtctgcggcaacagattggactggatcccgatacaactttcaaat
tgtaacctaaaggccttgtggctctcagaaaatcaggcacaacctctgatcaatttccag
accgaagaaattggcccccagaagctcaaagtcttgacttgtttcttactgccacaaagg
ggaccaacagagagtatggagaatcttcttcgaggtagcacagcgaccgaagaagaaccc
aacatggagaaagctggagagagggagattaggtttgcccccggaacacacaactatgag
gacacgaattcattcatcaggcacggcaccccacatcctcgggagctcaaggccaggcat
cccaagttcttcatgcatggcaaaggaagggaagtggacggacacttggctccacatgag
tcggaaaataatctggaatattatcaggaggatgaactcaggaacggcgcggacgaccag
cagcaacaccaccagccctccgttaactttctggtggagcccaaggtcatccctcctccc
gccacgacggaggccaacgccgaaccggtgcagctggaggagaggcagttaaccgaatcc
gaggctgtgagacaaaacgtagaagaggcggcaaaacaaccagacacgctgacagagacg
gaagaagaaagacacgtagggtttgcccttgaggaggagcaggaaatggaagaccagccc
gaaaagtcggacctcaaactacaccggcgagacaccccccactacctcaaaaacaaacgc
atcaatcttacttcacagacagacgacgaggctgctgccctcattcaccaggtcctggcc
aaggcgtcaagcccgcagaatgagcagccccccagcctccccgtggaagaggaaagggtg
gagattactttcagtagagatggtgatggtcttggcatcagtatagcagggggtcaaggg
tcaacacctttcaaaggaaacgatgagggtatcttcatatctcgagtcgtggacggaggc
tgtgctgcaaagtacggcctcaaagtgggagataaagtcatttcagtcaacgaatcaaca
ctggtcgatgccaaccacctcgacgcggtggaagtgttacggaacgcaggaaacgacatc
aggatcgtggtcctgcgggagattaaggaggatgacgacgtggtggtggtggagacctct
cctccaccaccagaagtcgaagacctcggtgatgggccgagagtggaccaaacgccaacg
ggcgagattgtagaacaaaatcatattcaggatgagcggtgggaaaaacatggggtctcg
tttgccccagaacctaaatttcacctggtgaaggagaaaattgctgtccgactaacgaag
gacaacaatggattgggattcagtgtggcagggggtaaaggctcgacaccttacaaagga
acggacacatccatattcatctcaagaatatcagagggcggagcagccgatagatgtgct
gccctcattgttggcgataaagtgctatcgattaataacttggatatgaccctcgcacga
cacgaccacgccgttgcgcttctgaccagctcgaggacgatagatctggtcgtcttgaga
gagtctatggaagtggaacatcacaaaccattagtcaaacacgaacccccgcaattcaga
tttcaacttgccaacaaagaggacagtaaccatgtcaacggtccctcggagcctgaaata
gaagaggtgaacctggtacggaccgggggtcccctgggactgagtatcgtcggtggtata
gaccattccagttatccctttggtgctgataaaccagggatcttcatctcaaagatcgtc
cccaacggttcggctgcccagaccaacctctgcgtcggagaccggttactcaaggtaaac
ggagaagacatggccaccgccaaacatcaagacgcggtcgccatgttgttatccaactca
caagccatccatctgctggttcagcatgacccccctcctgcaggattacaggaggtcttc
attacgaaagcacccggcgagaaacttggaatcagcataaggggaggcaacaagggtcac
cctggcaacccactggacaagaacgatgagggcatattcatatcgaagatcaatgacgtc
ggtgctgctgcaagggagggcaccttgggggttggacaaagaattttggaggtgaacgga
cagagcatgctaggttgcaaacacggagaagccgtccgagccctgaggggcgccggggac
aaactcaccctcctggtctgcgacgggtatgacccagaggaggtggaatactggaggtcg
cgacctggcgagatgaacaacccgctctcgcaggtggacatcgtcaagaggcagagtcag
gagagtattaattccattgatagggagatgagttctgaggaacttaaaagggtaaatatg
gaatctcagttacagaacgaagcagacgagtttgagaaagaagaattagaaaagatggag
gctttgagaaaacaacaagaggaggcaacacaaaggttacttacagaagagaatgaggag
gagatcactgtaaccgtggaaactcccataaaaagcagccccaacccctccagtgcaggg
gctgaggttaatcccaaccccgccggtggggttgaagacattcccagcccaataaggctc
gattcggtcgacaagccaatcaaaaagcctcctccgcctcctgtagcgccacgcccgccc
aaagaaatccgagaaaggattgtcgaagccaaacaggccgccaggacgtcaaatgcaagc
acgttgactagcggatcggccagtcccatgtcctcagaggagagtcattcactgccaacg
tcgccctctgcgaccccgcaggaggtaacgttacacaagtcggccctagaggccagaaag
gaggccctcaaggccagccgcctgggcagctcaaagacccccgaggtcgcccctaggccg
ttcaaggtggcgttcaaaccttctagagtctcagctcctaaagagcctctcaggatagac
ggagagaagagcgaaccggagagtctcggtttcaaagataagtggaagcgatttgaagaa
caaatagacgaacaagctcactcaacaccaaaatcaacatccaagaaagttgctctggta
agtcaagcagatctaaataacatgaaggtggacaaggagaggaaacagaaccaggtgacg
gaaacgaacgaaaatgacggcctctcagccgaagataggaggagaaaaatattggggctg
gaccccttgcccgaggcccctcccagtccctcctcatctgatttaaatgatgctgctgac
accaatggtcagcctgaaaggccaatgtccccctcagagaaaagagcgcaagacgccgaa
gaaagagcggctaagagggaggcaaggatgaaagatctggaggacgatgcactccaggca
cacattatccttgaaaccgactatagcaagactaaactgagagtagacggctcggtacca
aacggcaactctgcccctgatgtacagattacgacatcgggcggaatcgaggacattaag
ttcatggacgaagactga
DBGET
integrated database retrieval system
