Apostichopus japonicus (Japanese sea cucumber): 139957315
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Entry
139957315 CDS
T10891
Name
(RefSeq) pumilio homolog 3-like
KO
K14844
pumilio homology domain family member 6
Organism
ajj Apostichopus japonicus (Japanese sea cucumber)
Brite
KEGG Orthology (KO) [BR:
ajj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ajj03019
]
139957315
03009 Ribosome biogenesis [BR:
ajj03009
]
139957315
Messenger RNA biogenesis [BR:
ajj03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
139957315
Ribosome biogenesis [BR:
ajj03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
139957315
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPL
PUF
PUF_NOP9
AICARFT_IMPCHas
Motif
Other DBs
NCBI-GeneID:
139957315
NCBI-ProteinID:
XP_071811375
LinkDB
All DBs
Position
2:31981403..32013488
Genome browser
AA seq
638 aa
AA seq
DB search
MQGAAAKGSSQGILRKSTGKREGRKSLTGRKSAKLKARKSTKTPSKQIDKIMKEKRGTLT
PDDTEPTDKGQVITKGKSFQKRGIKRKFEGAKDKGDKRPALESMSYKERKGIRRKTKNNY
EIASNAKKIWEQVRDSKCPAEKRIALVSELCELIKSQVPDLVFAHDTVRVIQCCIQYGTE
EQRKAIFEEIRNKVVKMCKSKFGKHSVIKMLRYGTKEQKHHIIASFYGKVCQLVRNKDAA
EVVEESYNNFANAQQRSALMEEFYGPRFAIFKEAGVQTLGAILEKNPEMKPEIIEHMLKL
LTPLIDKSVVKHSIVHKALLDFMLYANNAKRAELIEGLRDVVVRILHTQDGAKAAMYSLW
FGTAKDRKIIIKSFKTFLSKICMEEFGHRVLFALFDCVDDTKLVEKAIINEIMSNCKEIA
EDPHGKKVILYMLAPRDPGHFHPDIVKLLERGDGNPVSKKDKETRQREIRDAASKPLMEM
VVENLGELLFDKSHSQLVLSILQHATGDKTEAYEAIASFAAEEFCPVFTDSRESAVEMHI
VEHPSGHLLLKRLIQHEKSLDAQAFTDLHRFSDVLVEKVPAANLQSWTKVNRGNLVLLSL
YENGSDAAKEQVKMAIDLKLLEKKDSKGAKALLEKLKE
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atgcaaggagctgcagcaaaaggatcatcccaaggaatcttgcggaaatcaacgggcaaa
cgtgaaggaaggaaatccctgactggacgtaaatcagctaaactgaaggcaagaaaatca
acaaagaccccaagcaagcagattgataaaatcatgaaagaaaagagaggaactttaact
ccagatgatacagagccaacagataagggtcaagtaatcacaaaaggaaaatctttccaa
aagagaggaattaaaagaaaatttgaaggtgccaaggataaaggagataaacgaccagca
ttagaatcaatgagctacaaagagaggaaaggtattagaagaaaaaccaagaataattat
gagatcgcttctaatgcaaagaagatttgggagcaggttagagactccaagtgtccagca
gagaaacggattgctttggtatctgaactttgtgaacttattaaaagtcaagtgccagat
cttgtatttgcccacgacacagtgcgtgtgatacagtgctgcatacagtatggaacagaa
gaacaacggaaggccatatttgaagaaatcagaaataaagtcgtgaagatgtgcaaatct
aagtttgggaagcattccgttatcaagatgttgcggtacggaactaaagagcaaaaacac
cacatcattgccagtttttacggaaaggtttgtcagctggtgaggaacaaagatgcagca
gaggtcgtggaggagagctataataactttgctaatgcacagcagagatctgctctgatg
gaagaattctatggaccaaggtttgccatatttaaggaggctggagttcagactttagga
gcaatcttagaaaagaatccagaaatgaagccggagatcatagagcatatgttgaaactt
cttacacctctcattgacaagtctgtggttaaacattccattgttcacaaggctttgttg
gattttatgctgtatgcgaacaatgccaagagagctgagttgattgaaggtctacgagat
gttgttgtgcgaattcttcacactcaagatggagctaaggcagccatgtactccttgtgg
tttggtactgcaaaggaccgtaaaataatcatcaagtcttttaagacatttctcagtaag
atatgtatggaggagtttggtcatcgtgtcctctttgctctgtttgactgcgtggacgac
acaaaactggtggaaaaagctatcatcaatgaaataatgagtaattgcaaagagattgca
gaagaccctcacggcaagaaggtgatactctatatgctggctccaagagaccctggtcac
ttccacccagatatagtcaaactactggagagaggggatggtaacccagtcagcaagaag
gataaggagacgaggcagagagagatacgagatgctgcttctaagcctctgatggagatg
gtggtggaaaatctgggagaactgctgtttgataaatcccatagtcagctggtgctatca
atcctccagcatgctactggtgataaaactgaagcatatgaagccattgcatcctttgct
gctgaagagttttgtccagtcttcactgattccagagaatctgctgttgaaatgcacatt
gttgaacatccttccggacacttgctcctcaaacgattaattcaacatgaaaaatctcta
gacgcacaagcctttacagatttgcacagattttcagatgttcttgtggaaaaagtccca
gctgctaatctgcaaagttggacaaaggttaacagaggaaatttggtgttactgagcctc
tatgagaatggttcagatgcagctaaggaacaagtcaaaatggcaattgatctgaaactt
ctggagaaaaaagactccaaaggagctaaagctcttcttgaaaaattgaaagagtga
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