Apostichopus japonicus (Japanese sea cucumber): 139958445
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Entry
139958445 CDS
T10891
Name
(RefSeq) integrin alpha-8-like
KO
K06584
integrin alpha 8
Organism
ajj Apostichopus japonicus (Japanese sea cucumber)
Pathway
ajj04512
ECM-receptor interaction
ajj04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ajj00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
139958445
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
139958445
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ajj04515
]
139958445
Cell adhesion molecules [BR:
ajj04515
]
Integrins
Integrin alpha subunits
139958445
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_A_Ig_3
Integrin_A_Ig_2
FG-GAP
Integrin_A_Ig_1
FG-GAP_3
FG-GAP_2
Big_12
ITGAX-like_Ig_3
DMT_YdcZ
Motif
Other DBs
NCBI-GeneID:
139958445
NCBI-ProteinID:
XP_071811629
LinkDB
All DBs
Position
18:complement(14186230..14225082)
Genome browser
AA seq
1029 aa
AA seq
DB search
MANVKSCIFCLTLFVFNLFTFLTIVFGYNLDIHSPITVDATSRDTYFGFSADIHTEGSEN
MLIIGAPLQDNGINGVSQSGAVYKCPLNPPYVNVTCTYITLDNSKGSDSNKSHQWLGATV
RSAGLNGVVMSCAPFYKAILPSYIAICGKCFFSSENFGKKKNTIVCPAKTTDTYSPFSVG
TGCQAGMDGDLTSEGKFILGTPGSYGHQGNIFVQTQSKTINATEREGDFDGSLQGYAVGY
GRFTGPGHGLSYVTGSPRAASLFGMVFIYNKGRVYLKQIGSLIGEELGSYFGYSLAVADF
NDDGFDDIVVGAPSFWNKAQNKINVGQIHVFYQNKARELPSDTKTVINGKVTNGRFGLSV
TAIGDINDDGVNDVAVGAPYDDDGAVFIYHGRRGDKLNTLATQVLRPKDFGISFKSFGYF
IRGGRDADNNTYPDLIVGDYTSDKVLVVRTRPIIRPLLQITFDPEEADLKNANINIENKT
VSGFKVTIKMTYEGKGTPATHNFSLEITVDSEKVKHRAEFYYEGNYTRMINLADRNISKD
VEFSITLTAVLKDQIIDKVDPIVVQVVASPDTEIDLPLGEIAPVVDGETRTLKKQIRIAC
SLAKTCFPNITLTVESDKSVLYMGDTSQLKLTVTVENSGDEAYESKLHVETHLMLSAQTV
IKSDLAIICIEQRSLSRVVCDLGNPLRGRTTIKFVMTFDIQSVPGDSRSLLTSFHVGSAN
SDPLENNNKTLEISLEPKIDVTLSGLANIDQVIYNDTDELLGDEIIHKYLVHNSGPGTIG
NATLLVRWPMFIQEEEYLLYLTDVSLSNGGLCYVIDSSINPEDLNLTTHTFPEENQKLRN
ETEGGRNRQRRNVEGNWSIYQEEEELPVAMTRSDLSETYVANCSREYYGCVLIECSLENV
LKEETVILTIRSRTWSKTLSKENTFSWEIVSSASLDIHNLPYVAQPDIGLHETAMISLRA
TPNTLKETLHVPFWAILVSIFVGLLILILIIIILWKLGFFKRKKFDKDGIPATAPTDVVV
ENIEKEEPN
NT seq
3090 nt
NT seq
+upstream
nt +downstream
nt
atggcaaatgtgaagagttgtatattttgcctgactttgtttgtatttaatttatttaca
tttttaactatcgtcttcggttataacctggatattcactcacctatcaccgttgatgca
acttcacgtgatacgtactttggattttctgccgacattcatacagaaggctcggaaaat
atgttaattattggagctcctttgcaagataatggaataaatggagtttcccagtctgga
gcggtgtacaaatgtccattaaatccaccgtatgtcaatgtgacatgtacctacattacc
cttgacaattccaaaggaagcgacagcaataaatctcatcagtggttgggagccacggtg
agaagtgccggactcaatggtgtcgtcatgagttgtgccccgttctacaaagcaatacta
ccctcttacatcgcaatttgtggaaaatgtttcttttcgagcgaaaattttggaaaaaag
aaaaatacaatagtatgtccagcgaaaactaccgacacgtattctccttttagcgtggga
accggttgtcaagctggtatggatggcgatttaacatcggagggtaaatttattctcgga
acaccgggatcatatggacatcaaggaaatatctttgttcaaacccagtctaaaactata
aacgcaacagaacgagagggggattttgacggcagtttacaaggatatgcagtgggttat
ggtcgtttcacgggtccgggtcacggcctaagttacgtcaccggtagtccgagagctgct
tctcttttcggcatggtgtttatatacaataaaggaagagtttacctcaaacaaattggg
tctcttattggtgaagagctcggcagctattttggatacagtctagccgttgcagacttc
aatgacgatggattcgatgacattgttgttggggcgccctcattttggaacaaggcacaa
aataaaatcaacgtggggcaaatacatgttttctaccagaataaagcgagagaactgcca
tcagacactaaaaccgtgataaacggtaaggttacgaacggtcgattcggtttatcggtt
accgctataggagatatcaacgacgatggagtaaacgatgtagcggtgggggctccctat
gatgacgatggtgcggtctttatttaccacggtaggaggggtgacaaactgaacacactt
gcaacacaggttctccgtccaaaagactttggtatatctttcaaaagttttggatatttc
ataagagggggcagggatgctgataacaacacatacccagacttaatagttggggattac
acatccgataaagtgctagtcgttcgtacgaggccgatcatacgtcctttgcttcaaata
acctttgacccagaggaggcggatttgaaaaatgctaatataaatattgaaaacaagact
gtaagtgggtttaaagtgacaattaagatgacatatgaaggaaaagggactccagctaca
cacaacttctctttggagattacggtagattcagaaaaagtgaaacacagagctgaattt
tattatgagggtaactacacgagaatgattaacttagcagaccgaaatatctcaaaggat
gtggaattctcaataactcttactgcagttttaaaggatcaaattatcgataaagtagat
cctatcgtggttcaagtcgtggctagtcctgatacagagatcgaccttcctctgggtgaa
atagctcctgtggtggatggagagactcgaacattaaaaaaacagattcggatagcctgt
tccttggcaaagacatgttttccaaacataaccctgacagttgaaagtgataagtctgtg
ctttacatgggagatacatcacagcttaagttaacagtgactgtggagaattccggagat
gaagcatacgagtccaaattacacgtagaaacacatctgatgctatcggcacaaactgtc
ataaaatcggatttggcaataatttgcatagaacagaggtcattatccagagtggtctgt
gatttgggaaatcccctaagaggtcgtaccacaattaagtttgttatgacgtttgatatt
caatccgttcctggcgatagtcgttctctactgacgagtttccacgtggggagtgcaaat
agtgatccattggagaacaacaataaaaccctcgaaatttctctggagccgaaaatagat
gttacactgagtggacttgcaaacattgatcaggtgatttacaacgacaccgatgagctc
cttggggacgaaattattcataaatacttggtacataacagtggaccaggaacgatcgga
aacgccaccctgttggtcagatggccaatgtttatccaagaggaggagtaccttctttac
ctcactgatgtatcgcttagcaacggaggcttgtgttacgtcattgatagttccattaat
ccggaggacttaaatctaacaacgcacacatttccagaggaaaaccagaaattaagaaat
gagactgaaggagggaggaacaggcaacggaggaacgtagaaggtaactggtcaatttat
caggaggaggaggagctacctgtggcaatgacccgatcagatctttcagaaacttacgtg
gctaactgttcacgtgaatattatgggtgtgtcctgatagaatgcagtctagaaaacgtt
ttgaaagaagaaactgtcattttgacaatacgctccagaacttggtcgaaaactctatcg
aaggaaaacacattttcttgggaaatcgtgtcttctgcttcattggatattcataatttg
ccgtacgttgctcagcctgacataggactccacgaaactgcaatgatctctttaagggcg
actcccaacacccttaaagagacgcttcatgttccgttttgggcgattctggtttcgata
tttgttggtctattgatactcattttgatcatcattatactatggaagcttggattcttc
aaacgcaagaagttcgacaaggatggaattcctgcaacagcaccaacagatgtggttgtc
gagaatatagagaaggaagaaccgaattaa
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integrated database retrieval system
