Apostichopus japonicus (Japanese sea cucumber): 139958573
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Entry
139958573 CDS
T10891
Name
(RefSeq) integrin alpha-8-like isoform X1
KO
K06584
integrin alpha 8
Organism
ajj Apostichopus japonicus (Japanese sea cucumber)
Pathway
ajj04512
ECM-receptor interaction
ajj04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ajj00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
139958573
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
139958573
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ajj04515
]
139958573
Cell adhesion molecules [BR:
ajj04515
]
Integrins
Integrin alpha subunits
139958573
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_A_Ig_3
Integrin_A_Ig_1
Integrin_A_Ig_2
FG-GAP
FG-GAP_3
FG-GAP_2
ITGAX-like_Ig_3
LYRIC
SIT
Integrin_alpha
Motif
Other DBs
NCBI-GeneID:
139958573
NCBI-ProteinID:
XP_071811823
LinkDB
All DBs
Position
18:16334463..16454739
Genome browser
AA seq
1022 aa
AA seq
DB search
MDLAILSILSCILCSGVNGFNLDQNWPILHYGPDDSLFGYSVALHQDSNVNWILVGAPKD
VTAQPDVDQGGTVYKCPTSPIENLGICEKIPLDTEGSANDELKSHQYMGATVRSGGVNGD
ILACAPRFVWKTVDMKGNALREPVGQCILTNSDFTPKEDYTPCRTNQISDRTLSRITHCQ
AGFSAELLENGQTILLGTPGSFFMQGQLYVRSATGQKKTGEGRKERDDNYRGFAVSYGEF
TDDQTADIVSGAPRASFLQGQVEVFSSDLESLYNFTGDQLGAYFGSEVITADVNGDGLDD
VIVGAPMYSDERAGFLDNWECGKISVYYQESSPAKRATALFKSHSDHILGTQKQARFGYS
MTSLGDINYDGYDDIAVGAPYDGPNGEGSVYIFNGNASGLVSRPSQVLSPTDLGLSNIKT
FGFSLDGNMDADGNNYPDLLIGSQESSFVALFRARPVVHISPVLTLTPEGLNLDEKNLRL
SDGTMVSSFQVDLCFSYSGRYIPNTLGIIYTIQLDTLYTLGSRVLFYNEGAADEPSLRQA
TVLPKGEQECLSKTAYVKPNIVEKLAPIQVSVEYALENSNTQQYELEPILSYSSQSMTSK
QVFILNNCKDNLCVPNLVIKNTTFSLPSIVVGSEKLVTLNLHITNAGEDAFQAKLRAYIP
DGLQFVRIENVDSLGISVTCTADDTNNIIICDLGNPLMPNFQLPMGLTLSTDEVLGDKDK
LDFYVIVTSQNEEIEATLADNERNLTLSVEVQASLRINNASNPEQVQFMSEDSEDEIVVR
EISALDQIGPVVEHVYDIRNDGPSIVGRTTAEVWWPLYDSKNKYALYVIDVKPDSCSVPS
DLENQENYPATASDMLYDPTSTNSRRKRQVTDGQLSTKLQCSFGNCVKFTCEISQLLPGE
GYDIRIKSRFWNQSFIASGKARIEIKSSILVNVKQMPYAIATAPYPSATNFIATTAVPER
PPQGQIAWWIILLAILCGLLLLFLIIIALWKLGFFKRKKVDYETKQESGEGGATAPPAYS
ET
NT seq
3069 nt
NT seq
+upstream
nt +downstream
nt
atggatttagcaatcctaagtattttgtcctgcatattgtgcagtggggtcaatggattc
aatttagaccagaattggcccattttacattatggaccagacgattcactgttcgggtat
tctgtggccttgcaccaagacagtaatgtcaactggattctagttggagcaccaaaagat
gtcactgcccagcctgatgtggaccaaggaggcaccgtttataaatgtccaacttctccg
atcgaaaacctaggaatctgcgagaagatcccattggataccgaaggtagtgccaacgat
gaattgaagtcccaccagtacatgggagctactgtgaggagtggaggggtaaatggagac
atacttgcatgtgcgccccgttttgtctggaaaacggtcgacatgaagggaaacgctttg
agggagcctgttggacagtgcatcctcaccaacagtgacttcacccccaaagaggattac
acaccttgcaggacaaaccaaataagcgacagaaccttgtcaaggataacgcattgtcag
gccggtttcagcgcagaacttttggagaatgggcagacgattctacttggtacacctggt
agtttctttatgcaaggtcagctgtatgtgaggtcagccactggacagaagaagacgggg
gaaggcaggaaggaacgagatgataactataggggttttgcagtgagttatggagagttt
acagacgaccagaccgctgacattgtctcaggtgcacccagggcatcattcttgcagggc
caggttgaagtattttcttccgatttggagtccctctataattttaccggtgatcaactt
ggagcctactttggcagtgaagtgataacagcagatgtaaatggtgacggacttgatgat
gtcatcgttggtgcgccgatgtattcggatgaacgagccggtttcttggataactgggaa
tgcggcaaaatttccgtctactaccaagaatcctctcctgccaaaagagctacggcactc
ttcaaatcacattccgaccacatcctgggaacgcagaagcaggctcgctttggttactca
atgacttctcttggagacataaactacgatggttatgatgacattgctgttggtgctcca
tacgatggtcccaacggtgaagggagtgtgtatatatttaatggaaatgcttctggatta
gtttcacgcccgtctcaggttttatcaccgacagacctcggtcttagtaatatcaaaaca
tttgggttctccttagatggaaatatggacgcagacgggaacaattatccagatcttctg
attggttcacaggaatcttcctttgtagctctcttcagagctcgacccgtagtccacata
tcaccagtgctgaccttaacaccagaaggacttaacctcgacgagaagaatctgaggctg
tctgacggtaccatggtttcgagttttcaagtggatttgtgtttcagttacagtggaaga
tacattcccaatacattaggaatcatctatacaattcagctagacaccctatataccctg
ggatccagggttctcttctataacgaaggagcagcagacgagccttccttgagacaagca
acagtactacccaagggagaacaagagtgtctttcaaaaacggcttacgttaagccaaac
attgtcgagaagttggcaccgattcaggtgtctgtggaatacgctttggagaattccaac
actcagcagtatgagctggaaccaatactaagctattcatcacagtcaatgacatcaaag
caggtcttcatcctcaacaactgtaaagataatctttgcgtcccgaatcttgtgatcaag
aatacgacgttctcgctcccaagcatcgtagtgggatctgagaagttggtgacccttaat
ttgcatataacaaacgctggtgaagatgcattccaagccaagctgagagcttacattccg
gacggactacagtttgttagaatcgagaacgtagattctctgggaatatccgtgacgtgt
acagcagatgacaccaacaacattatcatttgtgaccttggcaacccactcatgccaaac
tttcagttgccaatggggttaacgctctctactgatgaggtgctcggagacaaggacaag
ctggatttctatgtcatagtgacaagccaaaatgaagaaattgaggcgacgcttgctgac
aatgagaggaatttaactttatcagtcgaggttcaggctagcctccggattaataatgcc
tcaaatccagaacaggtgcagtttatgtccgaagatagcgaagatgaaattgtagtccga
gagatctcggccctcgatcagattggaccagtagtagaacatgtttatgatattcgtaac
gatggaccgagcatcgtcggtagaaccaccgctgaagtttggtggccgttgtacgacagc
aagaataaatacgcactctacgtcatcgacgtcaaaccggattcttgttcagttccgtcg
gacctggaaaatcaagaaaactatccagcgactgcttccgacatgctgtacgatcctact
tcaaccaactctagaaggaaaaggcaggttacggacgggcaactgtcgaccaagttacaa
tgttctttcggtaactgcgtcaaatttacatgcgaaattagccaattattacctggggaa
ggatatgacatcaggataaagtcaagattctggaaccaatcgtttatagccagtggtaaa
gcaaggatagaaataaagtcttctatattagtaaatgttaaacagatgccctatgcaata
gcaacagcaccttatccctcagcaactaattttatcgccaccactgctgtgccagaaagg
cctccccaaggtcaaatagcctggtggatcatcttgctcgcaatactatgcggtttgctg
ctcctgttcttaattatcatcgccctttggaaactgggtttcttcaaacgcaaaaaggtc
gactatgagaccaaacaggaaagtggcgaaggaggagcaaccgctcccccggcctacagc
gaaacataa
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